RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	YME2	P32843	850 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	LHS1	P36016	881 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	YMC2	P38087	329 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	MUP3	P38734	546 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	RRF1	P38771	230 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	YHR054C	P38780	354 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	CHS7	P38843	316 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	UIP3	P39547	235 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	MRX1	P40050	688 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	SER3	P40054	469 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	FET5	P43561	622 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	YFL015C	P43578	164 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	APT1	P49435	187 aa	Known RBP	2.87	□□□□□ -1.95
TFB1	YDR311W	YGR111W	P53265	400 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	YPR003C	P53394	754 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	PDS5	Q04264	1277 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	VTI1	Q04338	217 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	TAP42	Q04372	366 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	COQ9	Q05779	260 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	YLR456W	Q06199	204 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	TAF3	Q12297	353 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	HSP42	Q12329	375 aa		2.87	□□□□□ -1.95
TFB1	YDR311W	RTC1	Q08281	1341 aa		2.86	□□□□□ -1.95
TFB1	YDR311W	CHO1	P08456	276 aa		2.86	□□□□□ -1.95
TFB1	YDR311W	SMI1	P32566	505 aa		2.86	□□□□□ -1.95
TFB1	YDR311W	YME1	P32795	747 aa		2.86	□□□□□ -1.95
TFB1	YDR311W	HCS1	P34243	683 aa		2.86	□□□□□ -1.95
TFB1	YDR311W	GLG1	P36143	616 aa		2.86	□□□□□ -1.95
TFB1	YDR311W	FTH1	P38310	465 aa		2.86	□□□□□ -1.95
TFB1	YDR311W	ARG2	P40360	574 aa		2.86	□□□□□ -1.95
TFB1	YDR311W	CCT7	P42943	550 aa	Known RBP	2.86	□□□□□ -1.95
TFB1	YDR311W	YGL117W	P53133	265 aa		2.86	□□□□□ -1.95
TFB1	YDR311W	MNP1	P53163	194 aa	Predicted RBP	2.86	□□□□□ -1.95
TFB1	YDR311W	IST1	P53843	298 aa	Predicted RBP	2.86	□□□□□ -1.95
TFB1	YDR311W	EOS1	P53938	366 aa		2.86	□□□□□ -1.95
TFB1	YDR311W	MUK1	Q02866	612 aa		2.86	□□□□□ -1.95
TFB1	YDR311W	VTA1	Q06263	330 aa		2.86	□□□□□ -1.95
TFB1	YDR311W	ARO10	Q06408	635 aa		2.86	□□□□□ -1.95
TFB1	YDR311W	DCI1	Q08558	271 aa		2.86	□□□□□ -1.95
TFB1	YDR311W	UAF30	Q08747	228 aa		2.86	□□□□□ -1.95
TFB1	YDR311W	MDM20	Q12387	796 aa	Known RBP	2.86	□□□□□ -1.95
TFB1	YDR311W	AHA1	Q12449	350 aa	Known RBP	2.86	□□□□□ -1.95
TFB1	YDR311W	SEC3	P33332	1336 aa	Known RBP	2.86	□□□□□ -1.95
TFB1	YDR311W	LPD1	P09624	499 aa	Known RBP	2.85	□□□□□ -1.95
TFB1	YDR311W	KRS1	P15180	591 aa	Known RBP	2.85	□□□□□ -1.95
TFB1	YDR311W	YJU2	P28320	278 aa	Predicted RBP	2.85	□□□□□ -1.95
TFB1	YDR311W	YBL055C	P34220	418 aa	Predicted RBP	2.85	□□□□□ -1.95
TFB1	YDR311W	TUL1	P36096	758 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	NUP133	P36161	1157 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	PXL1	P36166	706 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	ADH5	P38113	351 aa	Known RBP	2.85	□□□□□ -1.95
TFB1	YDR311W	MSR1	P38714	643 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	PKP1	P40530	394 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	OPT1	P40897	799 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	RPN11	P43588	306 aa	Known RBP	2.85	□□□□□ -1.95
TFB1	YDR311W	STU2	P46675	888 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	FYV8	P46949	817 aa	Known RBP	2.85	□□□□□ -1.95
TFB1	YDR311W	KIN4	Q01919	800 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	MSC1	Q03104	513 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	DON1	Q05610	365 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	TEN1	Q07921	160 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	PML1	Q07930	204 aa	Predicted RBP	2.85	□□□□□ -1.95
TFB1	YDR311W	VPS54	Q12071	889 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	LEU9	Q12166	604 aa	Known RBP	2.85	□□□□□ -1.95
TFB1	YDR311W	PSY3	Q12318	242 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	YDL007C-A	Q2V2Q0	85 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	DAP2	P18962	818 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	IDH2	P28241	369 aa	Known RBP	2.85	□□□□□ -1.95
TFB1	YDR311W	GYP6	P32806	458 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	SLM4	P38247	162 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	YSW1	P38280	609 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	ANS1	P38832	159 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	PHM8	P40025	321 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	ASG1	P40467	964 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	FAR3	P46671	204 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	RPS10B	P46784	105 aa	Known RBP	2.85	□□□□□ -1.95
TFB1	YDR311W	SMC3	P47037	1230 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	CAF130	P53280	1122 aa	Predicted RBP	2.85	□□□□□ -1.95
TFB1	YDR311W	NCS2	P53923	493 aa	Predicted RBP	2.85	□□□□□ -1.95
TFB1	YDR311W	GFD1	Q04839	188 aa	Known RBP	2.85	□□□□□ -1.95
TFB1	YDR311W	SIL1	Q08199	421 aa		2.85	□□□□□ -1.95
TFB1	YDR311W	RPS10A	Q08745	105 aa	Predicted RBP	2.85	□□□□□ -1.95
TFB1	YDR311W	LEA1	Q08963	238 aa	Predicted RBP	2.85	□□□□□ -1.95
TFB1	YDR311W	TY1B-A	O13527	1196 aa	Known RBP	2.84	□□□□□ -1.95
TFB1	YDR311W	CLC1	P17891	233 aa		2.84	□□□□□ -1.95
TFB1	YDR311W	YIM1	P28625	365 aa		2.84	□□□□□ -1.95
TFB1	YDR311W	LTV1	P34078	463 aa		2.84	□□□□□ -1.95
TFB1	YDR311W	SWH1	P35845	1188 aa		2.84	□□□□□ -1.95
TFB1	YDR311W	UIP5	P36137	443 aa		2.84	□□□□□ -1.95
TFB1	YDR311W	TSC10	P38342	320 aa		2.84	□□□□□ -1.95
TFB1	YDR311W	IMD2	P38697	523 aa	Known RBP	2.84	□□□□□ -1.95
TFB1	YDR311W	YHL017W	P38745	532 aa		2.84	□□□□□ -1.95
TFB1	YDR311W	EXO1	P39875	702 aa		2.84	□□□□□ -1.95
TFB1	YDR311W	PTR3	P43606	678 aa		2.84	□□□□□ -1.95
TFB1	YDR311W	NET1	P47035	1189 aa		2.84	□□□□□ -1.95
TFB1	YDR311W	FMS1	P50264	508 aa		2.84	□□□□□ -1.95
TFB1	YDR311W	RHO5	P53879	331 aa	Known RBP	2.84	□□□□□ -1.95
TFB1	YDR311W	RAD34	Q06665	692 aa		2.84	□□□□□ -1.95
TFB1	YDR311W	CYK3	Q07533	885 aa		2.84	□□□□□ -1.95
TFB1	YDR311W	YER145C-A	A0A023PYF4	145 aa		2.83	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms