RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C IBD2P53892 351 aa6.2□□□□□ -1.42
VPS61YDR136C PRP38Q00723 242 aaPredicted RBP6.2□□□□□ -1.42
VPS61YDR136C CEG1Q01159 459 aaPredicted RBP6.2□□□□□ -1.42
VPS61YDR136C SPP2Q02521 185 aa6.2□□□□□ -1.42
VPS61YDR136C YML131WQ03102 365 aa6.2□□□□□ -1.42
VPS61YDR136C MMT1Q03218 510 aa6.2□□□□□ -1.42
VPS61YDR136C YDR131CQ03899 556 aa6.2□□□□□ -1.42
VPS61YDR136C GPI17Q04080 534 aa6.2□□□□□ -1.42
VPS61YDR136C YML083CQ04526 418 aa6.2□□□□□ -1.42
VPS61YDR136C YDR109CQ04585 715 aa6.2□□□□□ -1.42
VPS61YDR136C SWC7Q06707 132 aa6.2□□□□□ -1.42
VPS61YDR136C SGT1Q08446 395 aa6.2□□□□□ -1.42
VPS61YDR136C RPN8Q08723 338 aaKnown RBP6.2□□□□□ -1.42
VPS61YDR136C UAF30Q08747 228 aa6.2□□□□□ -1.42
VPS61YDR136C GPM2Q12008 311 aa6.2□□□□□ -1.42
VPS61YDR136C COX5AP00424 153 aa6.19□□□□□ -1.42
VPS61YDR136C CCP1P00431 361 aa6.19□□□□□ -1.42
VPS61YDR136C REP1P03871 373 aa6.19□□□□□ -1.42
VPS61YDR136C MIS1P09440 975 aaKnown RBP6.19□□□□□ -1.42
VPS61YDR136C MSS116P15424 664 aaKnown RBP6.19□□□□□ -1.42
VPS61YDR136C ART10P18634 518 aaKnown RBP6.19□□□□□ -1.42
VPS61YDR136C BUD23P25627 275 aaPredicted RBP6.19□□□□□ -1.42
VPS61YDR136C BEM1P29366 551 aa6.19□□□□□ -1.42
VPS61YDR136C APE2P32454 952 aaKnown RBP6.19□□□□□ -1.42
VPS61YDR136C RPN2P32565 945 aaKnown RBP6.19□□□□□ -1.42
VPS61YDR136C TKL2P33315 681 aa6.19□□□□□ -1.42
VPS61YDR136C FRE2P36033 711 aa6.19□□□□□ -1.42
VPS61YDR136C RFS1P38234 210 aaKnown RBP6.19□□□□□ -1.42
VPS61YDR136C YHL012WP38709 493 aa6.19□□□□□ -1.42
VPS61YDR136C YHR131CP38835 850 aa6.19□□□□□ -1.42
VPS61YDR136C FAD1P38913 306 aa6.19□□□□□ -1.42
VPS61YDR136C EDC3P39998 551 aaKnown RBP6.19□□□□□ -1.42
VPS61YDR136C THO1P40040 218 aaKnown RBP6.19□□□□□ -1.42
VPS61YDR136C YIR007WP40566 764 aa6.19□□□□□ -1.42
VPS61YDR136C CDC1P40986 491 aa6.19□□□□□ -1.42
VPS61YDR136C ELP2P42935 788 aa6.19□□□□□ -1.42
VPS61YDR136C ROK1P45818 564 aaPredicted RBP6.19□□□□□ -1.42
VPS61YDR136C SNG1P46950 547 aa6.19□□□□□ -1.42
VPS61YDR136C SPC98P53540 846 aa6.19□□□□□ -1.42
VPS61YDR136C YNL134CP53912 376 aaKnown RBP6.19□□□□□ -1.42
VPS61YDR136C ORC3P54790 616 aa6.19□□□□□ -1.42
VPS61YDR136C ERB1Q04660 807 aaKnown RBP6.19□□□□□ -1.42
VPS61YDR136C SSQ1Q05931 657 aaPredicted RBP6.19□□□□□ -1.42
VPS61YDR136C BLS1Q06071 122 aa6.19□□□□□ -1.42
VPS61YDR136C CRN1Q06440 651 aa6.19□□□□□ -1.42
VPS61YDR136C REH1Q06709 432 aa6.19□□□□□ -1.42
VPS61YDR136C HUA2Q12134 243 aa6.19□□□□□ -1.42
VPS61YDR136C YOR022CQ12204 715 aa6.19□□□□□ -1.42
VPS61YDR136C UBX3Q12229 455 aa6.19□□□□□ -1.42
VPS61YDR136C THP2O13539 261 aaKnown RBP6.18□□□□□ -1.42
VPS61YDR136C SUC2P00724 532 aa6.18□□□□□ -1.42
VPS61YDR136C HEM2P05373 342 aa6.18□□□□□ -1.42
VPS61YDR136C TPK3P05986 398 aa6.18□□□□□ -1.42
VPS61YDR136C RAP1P11938 827 aa6.18□□□□□ -1.42
VPS61YDR136C ACO1P19414 778 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
VPS61YDR136C RPB4P20433 221 aaPredicted RBP6.18□□□□□ -1.42
VPS61YDR136C CLN1P20437 546 aa6.18□□□□□ -1.42
VPS61YDR136C AAT2P23542 418 aaKnown RBP6.18□□□□□ -1.42
VPS61YDR136C RSA4P25382 515 aaKnown RBP6.18□□□□□ -1.42
VPS61YDR136C SGF29P25554 259 aa6.18□□□□□ -1.42
VPS61YDR136C SAC1P32368 623 aaKnown RBP6.18□□□□□ -1.42
VPS61YDR136C CDC3P32457 520 aaKnown RBP6.18□□□□□ -1.42
VPS61YDR136C PTH2P34222 208 aa6.18□□□□□ -1.42
VPS61YDR136C TOM20P35180 183 aa6.18□□□□□ -1.42
VPS61YDR136C MAE1P36013 669 aaKnown RBP6.18□□□□□ -1.42
VPS61YDR136C CAF4P36130 643 aa6.18□□□□□ -1.42
VPS61YDR136C MSC7P38694 644 aa6.18□□□□□ -1.42
VPS61YDR136C STB5P38699 743 aa6.18□□□□□ -1.42
VPS61YDR136C SFB3P38810 929 aa6.18□□□□□ -1.42
VPS61YDR136C YJL070CP40361 888 aa6.18□□□□□ -1.42
VPS61YDR136C YJL055WP47044 245 aa6.18□□□□□ -1.42
VPS61YDR136C NAS6P50086 228 aa6.18□□□□□ -1.42
VPS61YDR136C BOL2P53082 120 aa6.18□□□□□ -1.42
VPS61YDR136C ORM1P53224 222 aa6.18□□□□□ -1.42
VPS61YDR136C TOF2Q02208 771 aa6.18□□□□□ -1.42
VPS61YDR136C MUK1Q02866 612 aa6.18□□□□□ -1.42
VPS61YDR136C NHP10Q03435 203 aa6.18□□□□□ -1.42
VPS61YDR136C RCR2Q03446 210 aaKnown RBP6.18□□□□□ -1.42
VPS61YDR136C RSN1Q03516 953 aa6.18□□□□□ -1.42
VPS61YDR136C SPG3Q04398 127 aaPredicted RBP6.18□□□□□ -1.42
VPS61YDR136C NDL1Q06568 189 aa6.18□□□□□ -1.42
VPS61YDR136C RSB1Q08417 382 aa6.18□□□□□ -1.42
VPS61YDR136C NUS1Q12063 375 aa6.18□□□□□ -1.42
VPS61YDR136C ARP7Q12406 477 aa6.18□□□□□ -1.42
VPS61YDR136C AHA1Q12449 350 aaKnown RBP6.18□□□□□ -1.42
VPS61YDR136C AFI1Q99222 893 aa6.18□□□□□ -1.42
VPS61YDR136C SEC53P07283 254 aaKnown RBP6.17□□□□□ -1.42
VPS61YDR136C COS2P0CX12 379 aa6.17□□□□□ -1.42
VPS61YDR136C COS3P0CX13 379 aa6.17□□□□□ -1.42
VPS61YDR136C RPS4AP0CX35 261 aaKnown RBP6.17□□□□□ -1.42
VPS61YDR136C RPS4BP0CX36 261 aaKnown RBP6.17□□□□□ -1.42
VPS61YDR136C MCM1P11746 286 aa6.17□□□□□ -1.42
VPS61YDR136C NSP1P14907 823 aaKnown RBP6.17□□□□□ -1.42
VPS61YDR136C RAD27P26793 382 aa6.17□□□□□ -1.42
VPS61YDR136C CIN8P27895 1000 aa6.17□□□□□ -1.42
VPS61YDR136C STE14P32584 239 aa6.17□□□□□ -1.42
VPS61YDR136C DSS4P32601 143 aa6.17□□□□□ -1.42
VPS61YDR136C PTM1P32857 523 aa6.17□□□□□ -1.42
VPS61YDR136C SKT5P34226 696 aa6.17□□□□□ -1.42
VPS61YDR136C SPC34P36131 295 aa6.17□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms