RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	SPH1	Q06160	661 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	FEX1	Q08913	375 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	PMD1	P32634	1753 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	TUB2	P02557	457 aa	Known RBP	3.98	□□□□□ -1.77
VMA1	YDL185W	STE3	P06783	470 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	DSF1	P0CX08	502 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	YNR073C	P0CX09	502 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
VMA1	YDL185W	KIN3	P22209	435 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	RPL24B	P24000	155 aa	Known RBP	3.98	□□□□□ -1.77
VMA1	YDL185W	GUT2	P32191	649 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	APE2	P32454	952 aa	Known RBP	3.98	□□□□□ -1.77
VMA1	YDL185W	PRP21	P32524	280 aa	Predicted RBP	3.98	□□□□□ -1.77
VMA1	YDL185W	ZRT3	P34240	503 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	SRP72	P38688	640 aa	Known RBP	3.98	□□□□□ -1.77
VMA1	YDL185W	UTP18	P40362	594 aa	Predicted RBP	3.98	□□□□□ -1.77
VMA1	YDL185W	BUD32	P53323	261 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	SCS7	Q03529	384 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	YMR155W	Q03795	547 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	YLR257W	Q06146	321 aa	Known RBP	3.98	□□□□□ -1.77
VMA1	YDL185W	CUR1	Q06469	252 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	ESA1	Q08649	445 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	YOR012W	Q12351	137 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	AI5_BETA	Q9ZZX0	354 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	GSC2	P40989	1895 aa		3.98	□□□□□ -1.77
VMA1	YDL185W	BAR1	P12630	587 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
VMA1	YDL185W	CCA1	P21269	546 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	PMT2	P31382	759 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	ARO7	P32178	256 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	SKG6	P32900	734 aa	Predicted RBP	3.97	□□□□□ -1.77
VMA1	YDL185W	SEC61	P32915	480 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	SOL3	P38858	249 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	THO1	P40040	218 aa	Known RBP	3.97	□□□□□ -1.77
VMA1	YDL185W	SER2	P42941	309 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	STB4	P50104	949 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	DIA3	P52290	468 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	MRH4	P53166	561 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	PEF1	P53238	335 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	YPL068C	Q02749	293 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	SSY1	Q03770	852 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	APC4	Q04601	652 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	PDR8	Q06149	701 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	RSC2	Q06488	889 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	PMT7	Q06644	662 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	ECM30	Q06673	1274 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	YLL007C	Q07799	665 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	LAP2	Q10740	671 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	WRS1	Q12109	432 aa	Known RBP	3.97	□□□□□ -1.77
VMA1	YDL185W	NSL1	Q12143	216 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	YGL041W-A	P0C5N3	154 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	MSM1	P22438	575 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	CAM1	P29547	415 aa	Known RBP	3.97	□□□□□ -1.77
VMA1	YDL185W	ISF1	P32488	338 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	LST4	P34239	828 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	ANR2	P36090	516 aa	Predicted RBP	3.97	□□□□□ -1.77
VMA1	YDL185W	ROT2	P38138	954 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	TIR3	P40552	269 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	TAF11	Q04226	346 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	SKG3	Q06315	1026 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	RSC3	Q06639	885 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	KEL3	Q08979	651 aa	Predicted RBP	3.97	□□□□□ -1.77
VMA1	YDL185W	ENV7	Q12003	364 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	FPS1	P23900	669 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	ERG6	P25087	383 aa	Known RBP	3.97	□□□□□ -1.77
VMA1	YDL185W	PPZ1	P26570	692 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	URA10	P30402	227 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	MSS1	P32559	526 aa	Predicted RBP	3.97	□□□□□ -1.77
VMA1	YDL185W	YSC83	P32792	385 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	UIP5	P36137	443 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	CST26	P38226	397 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	FAD1	P38913	306 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	PNG1	Q02890	363 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	ENT5	Q03769	411 aa	Known RBP	3.97	□□□□□ -1.77
VMA1	YDL185W	RPN9	Q04062	393 aa	Known RBP	3.97	□□□□□ -1.77
VMA1	YDL185W	MFB1	Q04922	465 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	JIP5	Q06214	492 aa	Predicted RBP	3.97	□□□□□ -1.77
VMA1	YDL185W	WHI4	Q07655	649 aa	Known RBP	3.97	□□□□□ -1.77
VMA1	YDL185W	RTC5	Q12108	567 aa	Known RBP	3.97	□□□□□ -1.77
VMA1	YDL185W	MCD1	Q12158	566 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	MDM32	Q12171	622 aa		3.97	□□□□□ -1.77
VMA1	YDL185W	PRC1	P00729	532 aa		3.96	□□□□□ -1.78
VMA1	YDL185W	CMP2	P14747	604 aa		3.96	□□□□□ -1.78
VMA1	YDL185W	SRM1	P21827	482 aa		3.96	□□□□□ -1.78
VMA1	YDL185W	GID7	P25569	745 aa		3.96	□□□□□ -1.78
VMA1	YDL185W	CWH43	P25618	953 aa		3.96	□□□□□ -1.78
VMA1	YDL185W	FRE1	P32791	686 aa		3.96	□□□□□ -1.78
VMA1	YDL185W	BEM3	P32873	1128 aa		3.96	□□□□□ -1.78
VMA1	YDL185W	ARC19	P33204	171 aa	Known RBP	3.96	□□□□□ -1.78
VMA1	YDL185W	CBR1	P38626	284 aa	Known RBP	3.96	□□□□□ -1.78
VMA1	YDL185W	YHR218W	P38899	603 aa		3.96	□□□□□ -1.78
VMA1	YDL185W	CKB2	P38930	258 aa		3.96	□□□□□ -1.78
VMA1	YDL185W	MSS4	P38994	779 aa		3.96	□□□□□ -1.78
VMA1	YDL185W	PLB1	P39105	664 aa		3.96	□□□□□ -1.78
VMA1	YDL185W	GIP4	P39732	760 aa		3.96	□□□□□ -1.78
VMA1	YDL185W	TPA1	P40032	644 aa	Known RBP	3.96	□□□□□ -1.78
VMA1	YDL185W	NDE1	P40215	560 aa		3.96	□□□□□ -1.78
VMA1	YDL185W	IMA5	P40884	581 aa		3.96	□□□□□ -1.78
VMA1	YDL185W	ZAP1	P47043	880 aa		3.96	□□□□□ -1.78
VMA1	YDL185W	YNL010W	P53981	241 aa	Known RBP	3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms