RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C DCN1Q12395 269 aa1.08□□□□□ -2.24
VAM6YDL077C ATG31Q12421 196 aa1.08□□□□□ -2.24
VAM6YDL077C YPR1Q12458 312 aa1.08□□□□□ -2.24
VAM6YDL077C SKS1Q12505 502 aa1.08□□□□□ -2.24
VAM6YDL077C COA6Q3E846 104 aa1.08□□□□□ -2.24
VAM6YDL077C CET1O13297 549 aaPredicted RBP1.08□□□□□ -2.24
VAM6YDL077C ARG4P04076 463 aaPredicted RBP1.08□□□□□ -2.24
VAM6YDL077C TPK3P05986 398 aa1.08□□□□□ -2.24
VAM6YDL077C PPR1P07272 904 aaPredicted RBP1.08□□□□□ -2.24
VAM6YDL077C SEC53P07283 254 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C MAS1P10507 462 aa1.08□□□□□ -2.24
VAM6YDL077C RPL3P14126 387 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C FBA1P14540 359 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C YCK1P23291 538 aa1.08□□□□□ -2.24
VAM6YDL077C PRE8P23639 250 aa1.08□□□□□ -2.24
VAM6YDL077C ERG6P25087 383 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C CWH43P25618 953 aa1.08□□□□□ -2.24
VAM6YDL077C PHO91P27514 894 aa1.08□□□□□ -2.24
VAM6YDL077C CDC15P27636 974 aa1.08□□□□□ -2.24
VAM6YDL077C SPT14P32363 452 aa1.08□□□□□ -2.24
VAM6YDL077C ASF2P32448 525 aaPredicted RBP1.08□□□□□ -2.24
VAM6YDL077C ATP11P32453 318 aa1.08□□□□□ -2.24
VAM6YDL077C LYP1P32487 611 aa1.08□□□□□ -2.24
VAM6YDL077C MSS1P32559 526 aaPredicted RBP1.08□□□□□ -2.24
VAM6YDL077C VPH1P32563 840 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C NGR1P32831 672 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C RPT1P33299 467 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C RPS1AP33442 255 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C HIS7P33734 552 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C SNU114P36048 1008 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C RRN3P36070 627 aa1.08□□□□□ -2.24
VAM6YDL077C IRS4P36115 615 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C ARA1P38115 344 aa1.08□□□□□ -2.24
VAM6YDL077C CDS1P38221 457 aa1.08□□□□□ -2.24
VAM6YDL077C FAT1P38225 669 aa1.08□□□□□ -2.24
VAM6YDL077C SIF2P38262 535 aa1.08□□□□□ -2.24
VAM6YDL077C SDH8P38345 138 aa1.08□□□□□ -2.24
VAM6YDL077C HXT5P38695 592 aa1.08□□□□□ -2.24
VAM6YDL077C HSE1P38753 452 aa1.08□□□□□ -2.24
VAM6YDL077C MIP6P38760 659 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C PAN5P38787 379 aa1.08□□□□□ -2.24
VAM6YDL077C SUR2P38992 349 aa1.08□□□□□ -2.24
VAM6YDL077C VMA7P39111 118 aa1.08□□□□□ -2.24
VAM6YDL077C ATM1P40416 690 aa1.08□□□□□ -2.24
VAM6YDL077C FYV10P40492 516 aa1.08□□□□□ -2.24
VAM6YDL077C KTR7P40504 517 aa1.08□□□□□ -2.24
VAM6YDL077C VHR1P40522 640 aa1.08□□□□□ -2.24
VAM6YDL077C GCD10P41814 478 aa1.08□□□□□ -2.24
VAM6YDL077C PSA1P41940 361 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C SAE2P46946 345 aa1.08□□□□□ -2.24
VAM6YDL077C THI11P47183 340 aa1.08□□□□□ -2.24
VAM6YDL077C PUS4P48567 403 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C NAS6P50086 228 aa1.08□□□□□ -2.24
VAM6YDL077C TPN1P53099 579 aa1.08□□□□□ -2.24
VAM6YDL077C ERV14P53173 138 aa1.08□□□□□ -2.24
VAM6YDL077C YGR026WP53217 278 aa1.08□□□□□ -2.24
VAM6YDL077C CLD1P53264 445 aa1.08□□□□□ -2.24
VAM6YDL077C SSU72P53538 206 aaPredicted RBP1.08□□□□□ -2.24
VAM6YDL077C NOG2P53742 486 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C YNL181WP53878 407 aa1.08□□□□□ -2.24
VAM6YDL077C KTR6P54070 446 aa1.08□□□□□ -2.24
VAM6YDL077C VPS9P54787 451 aa1.08□□□□□ -2.24
VAM6YDL077C GPD1Q00055 391 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C MTD1Q02046 320 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C FOX2Q02207 900 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C YPL068CQ02749 293 aa1.08□□□□□ -2.24
VAM6YDL077C YDR476CQ03362 224 aa1.08□□□□□ -2.24
VAM6YDL077C TDA1Q03533 586 aa1.08□□□□□ -2.24
VAM6YDL077C TRS130Q03660 1102 aa1.08□□□□□ -2.24
VAM6YDL077C AIM36Q03798 255 aa1.08□□□□□ -2.24
VAM6YDL077C YDR514CQ04408 483 aa1.08□□□□□ -2.24
VAM6YDL077C YMR226CQ05016 267 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C YDR278CQ05612 105 aa1.08□□□□□ -2.24
VAM6YDL077C PNP1Q05788 311 aa1.08□□□□□ -2.24
VAM6YDL077C KAP95Q06142 861 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C IRC3Q06683 689 aa1.08□□□□□ -2.24
VAM6YDL077C PML1Q07930 204 aaPredicted RBP1.08□□□□□ -2.24
VAM6YDL077C YOL019WQ08157 551 aa1.08□□□□□ -2.24
VAM6YDL077C SDH5Q08230 162 aa1.08□□□□□ -2.24
VAM6YDL077C RRP40Q08285 240 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C MUM3Q08750 479 aa1.08□□□□□ -2.24
VAM6YDL077C RAX1Q08760 435 aa1.08□□□□□ -2.24
VAM6YDL077C TY3A-GQ12173 290 aa1.08□□□□□ -2.24
VAM6YDL077C TRM10Q12400 293 aa1.08□□□□□ -2.24
VAM6YDL077C GRX6Q12438 231 aa1.08□□□□□ -2.24
VAM6YDL077C RTN2Q12443 393 aa1.08□□□□□ -2.24
VAM6YDL077C RRP12Q12754 1228 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C TY3A-IQ99219 290 aa1.08□□□□□ -2.24
VAM6YDL077C QCR7P00128 127 aa1.07□□□□□ -2.24
VAM6YDL077C REP2P03872 296 aa1.07□□□□□ -2.24
VAM6YDL077C RHO2P06781 192 aa1.07□□□□□ -2.24
VAM6YDL077C NUC1P08466 329 aa1.07□□□□□ -2.24
VAM6YDL077C CIT2P08679 460 aa1.07□□□□□ -2.24
VAM6YDL077C MIS1P09440 975 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C RPL31AP0C2H8 113 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C RPL31BP0C2H9 113 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C COS2P0CX12 379 aa1.07□□□□□ -2.24
VAM6YDL077C COS3P0CX13 379 aa1.07□□□□□ -2.24
VAM6YDL077C SSB1P11484 613 aaKnown RBP1.07□□□□□ -2.24
VAM6YDL077C NHP6AP11632 93 aaKnown RBP1.07□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms