RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W RSN1Q03516 953 aa7.84□□□□□ -1.15
ABP1YCR088W RCO1Q04779 684 aa7.84□□□□□ -1.15
ABP1YCR088W HEL2Q05580 639 aaKnown RBP7.84□□□□□ -1.15
ABP1YCR088W GPI11Q06636 219 aa7.84□□□□□ -1.15
ABP1YCR088W GYP1Q08484 637 aa7.84□□□□□ -1.15
ABP1YCR088W THP2O13539 261 aaKnown RBP7.84□□□□□ -1.15
ABP1YCR088W EMC1P25574 760 aa7.84□□□□□ -1.15
ABP1YCR088W PAT1P25644 796 aaKnown RBP7.84□□□□□ -1.15
ABP1YCR088W BRF1P29056 596 aa7.84□□□□□ -1.15
ABP1YCR088W SSE2P32590 693 aaKnown RBP7.84□□□□□ -1.15
ABP1YCR088W SSZ1P38788 538 aaKnown RBP7.84□□□□□ -1.15
ABP1YCR088W KEL2P50090 882 aa7.84□□□□□ -1.15
ABP1YCR088W SAP4P53036 818 aa7.84□□□□□ -1.15
ABP1YCR088W ARP4P80428 489 aa7.84□□□□□ -1.15
ABP1YCR088W TOF2Q02208 771 aa7.84□□□□□ -1.15
ABP1YCR088W SRL4Q03085 281 aa7.84□□□□□ -1.15
ABP1YCR088W CLU1Q03690 1277 aaKnown RBP7.84□□□□□ -1.15
ABP1YCR088W RAD33Q04231 177 aa7.84□□□□□ -1.15
ABP1YCR088W PEX12Q04370 399 aa7.84□□□□□ -1.15
ABP1YCR088W YDR109CQ04585 715 aa7.84□□□□□ -1.15
ABP1YCR088W YDL114WQ07530 308 aa7.84□□□□□ -1.15
ABP1YCR088W YLL032CQ07834 825 aaKnown RBP RIP-Chip data7.84□□□□□ -1.15not detected
ABP1YCR088W NTG2Q08214 380 aa7.84□□□□□ -1.15
ABP1YCR088W PKH2Q12236 1081 aaKnown RBP7.84□□□□□ -1.15
ABP1YCR088W JLP1Q12358 412 aa7.84□□□□□ -1.15
ABP1YCR088W TIM9O74700 87 aa7.83□□□□□ -1.16
ABP1YCR088W PRC1P00729 532 aa7.83□□□□□ -1.16
ABP1YCR088W KSS1P14681 368 aa7.83□□□□□ -1.16
ABP1YCR088W FAR1P21268 830 aa7.83□□□□□ -1.16
ABP1YCR088W CMK2P22517 447 aa7.83□□□□□ -1.16
ABP1YCR088W GBP2P25555 427 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16not detected
ABP1YCR088W NTG1P31378 399 aa7.83□□□□□ -1.16
ABP1YCR088W SPC34P36131 295 aa7.83□□□□□ -1.16
ABP1YCR088W APE3P37302 537 aaKnown RBP7.83□□□□□ -1.16
ABP1YCR088W EDS1P38073 919 aa7.83□□□□□ -1.16
ABP1YCR088W EFM1P38732 585 aa7.83□□□□□ -1.16
ABP1YCR088W EGD2P38879 174 aaKnown RBP7.83□□□□□ -1.16
ABP1YCR088W FKH2P41813 862 aa7.83□□□□□ -1.16
ABP1YCR088W NUP85P46673 744 aa7.83□□□□□ -1.16
ABP1YCR088W TIS11P47977 285 aa7.83□□□□□ -1.16
ABP1YCR088W MTD1Q02046 320 aaKnown RBP7.83□□□□□ -1.16
ABP1YCR088W SPP2Q02521 185 aa7.83□□□□□ -1.16
ABP1YCR088W YMR111CQ04461 462 aaPredicted RBP7.83□□□□□ -1.16
ABP1YCR088W ESC8Q08119 714 aa7.83□□□□□ -1.16
ABP1YCR088W YOR389WQ08912 624 aa7.83□□□□□ -1.16
ABP1YCR088W ICT1Q12385 394 aa7.83□□□□□ -1.16
ABP1YCR088W PFK27Q12471 397 aaPredicted RBP7.83□□□□□ -1.16
ABP1YCR088W UBA1P22515 1024 aaKnown RBP7.82□□□□□ -1.16
ABP1YCR088W PHO87P25360 923 aa7.82□□□□□ -1.16
ABP1YCR088W SYN8P31377 255 aa7.82□□□□□ -1.16
ABP1YCR088W DSS4P32601 143 aa7.82□□□□□ -1.16
ABP1YCR088W CAF4P36130 643 aa7.82□□□□□ -1.16
ABP1YCR088W POL12P38121 705 aaPredicted RBP7.82□□□□□ -1.16
ABP1YCR088W YBR284WP38150 797 aa7.82□□□□□ -1.16
ABP1YCR088W STB5P38699 743 aa7.82□□□□□ -1.16
ABP1YCR088W RBG1P39729 369 aa7.82□□□□□ -1.16
ABP1YCR088W MTW1P39731 289 aa7.82□□□□□ -1.16
ABP1YCR088W TES1P41903 349 aaKnown RBP7.82□□□□□ -1.16
ABP1YCR088W SWP82P43554 623 aa7.82□□□□□ -1.16
ABP1YCR088W GCD14P46959 383 aaPredicted RBP7.82□□□□□ -1.16
ABP1YCR088W YPT32P51996 222 aaKnown RBP7.82□□□□□ -1.16
ABP1YCR088W CLD1P53264 445 aa7.82□□□□□ -1.16
ABP1YCR088W DSL1P53847 754 aa7.82□□□□□ -1.16
ABP1YCR088W TFB3Q03290 321 aa7.82□□□□□ -1.16
ABP1YCR088W NHP10Q03435 203 aa7.82□□□□□ -1.16
ABP1YCR088W YHC1Q05900 231 aaKnown RBP7.82□□□□□ -1.16
ABP1YCR088W ECM22Q05958 814 aaPredicted RBP7.82□□□□□ -1.16
ABP1YCR088W TPK3P05986 398 aa7.82□□□□□ -1.16
ABP1YCR088W MET17P06106 444 aa7.82□□□□□ -1.16
ABP1YCR088W POL30P15873 258 aaKnown RBP7.82□□□□□ -1.16
ABP1YCR088W AAT2P23542 418 aaKnown RBP7.82□□□□□ -1.16
ABP1YCR088W GUT2P32191 649 aa7.82□□□□□ -1.16
ABP1YCR088W FUI1P38196 639 aa7.82□□□□□ -1.16
ABP1YCR088W SRP72P38688 640 aaKnown RBP7.82□□□□□ -1.16
ABP1YCR088W ALD5P40047 520 aaKnown RBP7.82□□□□□ -1.16
ABP1YCR088W ARH1P48360 493 aa7.82□□□□□ -1.16
ABP1YCR088W RSC4Q02206 625 aa7.82□□□□□ -1.16
ABP1YCR088W RPN4Q03465 531 aa7.82□□□□□ -1.16
ABP1YCR088W LDB18Q07887 179 aa7.82□□□□□ -1.16
ABP1YCR088W TOP3P13099 656 aa7.81□□□□□ -1.16
ABP1YCR088W CAD1P24813 409 aaKnown RBP7.81□□□□□ -1.16
ABP1YCR088W PUP3P25451 205 aaKnown RBP7.81□□□□□ -1.16
ABP1YCR088W PEX3P28795 441 aa7.81□□□□□ -1.16
ABP1YCR088W VMA6P32366 345 aaKnown RBP7.81□□□□□ -1.16
ABP1YCR088W NUP2P32499 720 aa7.81□□□□□ -1.16
ABP1YCR088W RFS1P38234 210 aaKnown RBP7.81□□□□□ -1.16
ABP1YCR088W ECM8P38246 354 aa7.81□□□□□ -1.16
ABP1YCR088W FTH1P38310 465 aa7.81□□□□□ -1.16
ABP1YCR088W YHL012WP38709 493 aa7.81□□□□□ -1.16
ABP1YCR088W GND1P38720 489 aaKnown RBP7.81□□□□□ -1.16
ABP1YCR088W KRE29P40026 464 aa7.81□□□□□ -1.16
ABP1YCR088W THO1P40040 218 aaKnown RBP7.81□□□□□ -1.16
ABP1YCR088W UTP18P40362 594 aaPredicted RBP7.81□□□□□ -1.16
ABP1YCR088W RMD8P43620 662 aa7.81□□□□□ -1.16
ABP1YCR088W UPF3P48412 387 aaKnown RBP7.81□□□□□ -1.16
ABP1YCR088W ORM1P53224 222 aa7.81□□□□□ -1.16
ABP1YCR088W PIR3Q03180 325 aa7.81□□□□□ -1.16
ABP1YCR088W FMP45Q07651 309 aa7.81□□□□□ -1.16
ABP1YCR088W RSA1Q08932 381 aa7.81□□□□□ -1.16
ABP1YCR088W HER1Q12276 1246 aa7.81□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 44.1 ms