RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB3, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB3YBR278W ERB1Q04660 807 aaKnown RBP3.33□□□□□ -1.88
DPB3YBR278W PDR8Q06149 701 aa3.33□□□□□ -1.88
DPB3YBR278W TPO3Q06451 622 aa3.33□□□□□ -1.88
DPB3YBR278W SLK19Q08581 821 aaKnown RBP3.33□□□□□ -1.88
DPB3YBR278W ISA2Q12425 185 aa3.33□□□□□ -1.88
DPB3YBR278W SEC39Q12745 709 aa3.33□□□□□ -1.88
DPB3YBR278W PMS1P14242 873 aa3.32□□□□□ -1.88
DPB3YBR278W TKL1P23254 680 aaKnown RBP3.32□□□□□ -1.88
DPB3YBR278W CLB1P24868 471 aa3.32□□□□□ -1.88
DPB3YBR278W YCR006CP25350 157 aa3.32□□□□□ -1.88
DPB3YBR278W BOS1P25385 244 aa3.32□□□□□ -1.88
DPB3YBR278W SWI3P32591 825 aa3.32□□□□□ -1.88
DPB3YBR278W PMT1P33775 817 aa3.32□□□□□ -1.88
DPB3YBR278W GCS1P35197 352 aa3.32□□□□□ -1.88
DPB3YBR278W MIA40P36046 403 aa3.32□□□□□ -1.88
DPB3YBR278W ICS2P38284 255 aa3.32□□□□□ -1.88
DPB3YBR278W ARN1P38731 627 aa3.32□□□□□ -1.88
DPB3YBR278W LRP1P38801 184 aaKnown RBP3.32□□□□□ -1.88
DPB3YBR278W ANS1P38832 159 aa3.32□□□□□ -1.88
DPB3YBR278W HXT14P42833 540 aa3.32□□□□□ -1.88
DPB3YBR278W PTR3P43606 678 aa3.32□□□□□ -1.88
DPB3YBR278W RPS10BP46784 105 aaKnown RBP3.32□□□□□ -1.88
DPB3YBR278W LYS20P48570 428 aaKnown RBP3.32□□□□□ -1.88
DPB3YBR278W ERG26P53199 349 aaKnown RBP3.32□□□□□ -1.88
DPB3YBR278W ATP23P53722 227 aa3.32□□□□□ -1.88
DPB3YBR278W EAF7P53911 425 aaKnown RBP3.32□□□□□ -1.88
DPB3YBR278W ASI1P54074 624 aa3.32□□□□□ -1.88
DPB3YBR278W MSC1Q03104 513 aa3.32□□□□□ -1.88
DPB3YBR278W RCF1Q03713 159 aa3.32□□□□□ -1.88
DPB3YBR278W AIM32Q04689 311 aa3.32□□□□□ -1.88
DPB3YBR278W ADE13Q05911 482 aaKnown RBP3.32□□□□□ -1.88
DPB3YBR278W PIG1Q06216 648 aa3.32□□□□□ -1.88
DPB3YBR278W OSW1Q08692 278 aa3.32□□□□□ -1.88
DPB3YBR278W RPS10AQ08745 105 aaPredicted RBP3.32□□□□□ -1.88
DPB3YBR278W PFA4Q12006 378 aa3.32□□□□□ -1.88
DPB3YBR278W YDL007C-AQ2V2Q0 85 aa3.32□□□□□ -1.88
DPB3YBR278W ISN1Q99312 450 aa3.32□□□□□ -1.88
DPB3YBR278W BNR1P40450 1375 aa3.31□□□□□ -1.88
DPB3YBR278W ARG81P05085 880 aa3.31□□□□□ -1.88
DPB3YBR278W APE1P14904 514 aa3.31□□□□□ -1.88
DPB3YBR278W REC107P21651 314 aa3.31□□□□□ -1.88
DPB3YBR278W YME1P32795 747 aa3.31□□□□□ -1.88
DPB3YBR278W PPZ2P33329 710 aa3.31□□□□□ -1.88
DPB3YBR278W RFC1P38630 861 aaKnown RBP3.31□□□□□ -1.88
DPB3YBR278W APE4P38821 490 aa3.31□□□□□ -1.88
DPB3YBR278W CIN4P39110 191 aa3.31□□□□□ -1.88
DPB3YBR278W YJL107CP42947 387 aa3.31□□□□□ -1.88
DPB3YBR278W STB2P46679 850 aa3.31□□□□□ -1.88
DPB3YBR278W BNI5P53890 448 aaKnown RBP3.31□□□□□ -1.88
DPB3YBR278W CIK1Q01649 594 aa3.31□□□□□ -1.88
DPB3YBR278W ERO1Q03103 563 aa3.31□□□□□ -1.88
DPB3YBR278W ARX1Q03862 593 aaKnown RBP3.31□□□□□ -1.88
DPB3YBR278W PDS5Q04264 1277 aa3.31□□□□□ -1.88
DPB3YBR278W EMI2Q04409 500 aaKnown RBP3.31□□□□□ -1.88
DPB3YBR278W COQ9Q05779 260 aa3.31□□□□□ -1.88
DPB3YBR278W ECM30Q06673 1274 aa3.31□□□□□ -1.88
DPB3YBR278W IRC3Q06683 689 aa3.31□□□□□ -1.88
DPB3YBR278W PUT2P07275 575 aa3.3□□□□□ -1.88
DPB3YBR278W RPL3P14126 387 aaKnown RBP3.3□□□□□ -1.88
DPB3YBR278W MBR1P23493 339 aa3.3□□□□□ -1.88
DPB3YBR278W ELO2P25358 347 aa3.3□□□□□ -1.88
DPB3YBR278W ILV6P25605 309 aaKnown RBP3.3□□□□□ -1.88
DPB3YBR278W YCR051WP25631 222 aa3.3□□□□□ -1.88
DPB3YBR278W CDC60P26637 1090 aaKnown RBP3.3□□□□□ -1.88
DPB3YBR278W COQ3P27680 312 aa3.3□□□□□ -1.88
DPB3YBR278W GAC1P28006 793 aa3.3□□□□□ -1.88
DPB3YBR278W HXT3P32466 567 aaKnown RBP3.3□□□□□ -1.88
DPB3YBR278W FLO10P36170 1169 aa3.3□□□□□ -1.88
DPB3YBR278W RPL32P38061 130 aaKnown RBP3.3□□□□□ -1.88
DPB3YBR278W ARP1P38696 384 aa3.3□□□□□ -1.88
DPB3YBR278W MSR1P38714 643 aa3.3□□□□□ -1.88
DPB3YBR278W RIX1P38883 763 aaPredicted RBP3.3□□□□□ -1.88
DPB3YBR278W DLD2P46681 530 aaKnown RBP3.3□□□□□ -1.88
DPB3YBR278W AIM22P47051 409 aa3.3□□□□□ -1.88
DPB3YBR278W RSM23Q01163 450 aa3.3□□□□□ -1.88
DPB3YBR278W SWF1Q04629 336 aa3.3□□□□□ -1.88
DPB3YBR278W RBS1Q05672 457 aaKnown RBP3.3□□□□□ -1.88
DPB3YBR278W ATG26Q06321 1198 aa3.3□□□□□ -1.88
DPB3YBR278W TUB1P09733 447 aaKnown RBP3.29□□□□□ -1.88
DPB3YBR278W SUI2P20459 304 aaKnown RBP3.29□□□□□ -1.88
DPB3YBR278W OPI1P21957 404 aa3.29□□□□□ -1.88
DPB3YBR278W URE2P23202 354 aaKnown RBP3.29□□□□□ -1.88
DPB3YBR278W URA7P28274 579 aaKnown RBP3.29□□□□□ -1.88
DPB3YBR278W PAP1P29468 568 aaKnown RBP3.29□□□□□ -1.88
DPB3YBR278W ECM32P32644 1121 aaKnown RBP3.29□□□□□ -1.88
DPB3YBR278W VPS41P38959 992 aa3.29□□□□□ -1.88
DPB3YBR278W IRC7P43623 340 aa3.29□□□□□ -1.88
DPB3YBR278W UBP8P50102 471 aa3.29□□□□□ -1.88
DPB3YBR278W PYK2P52489 506 aaKnown RBP3.29□□□□□ -1.88
DPB3YBR278W MNP1P53163 194 aaPredicted RBP3.29□□□□□ -1.88
DPB3YBR278W CAF130P53280 1122 aaPredicted RBP3.29□□□□□ -1.88
DPB3YBR278W OGG1P53397 376 aaPredicted RBP3.29□□□□□ -1.88
DPB3YBR278W ROY1Q04847 553 aa3.29□□□□□ -1.88
DPB3YBR278W ORM2Q06144 216 aa3.29□□□□□ -1.88
DPB3YBR278W VTA1Q06263 330 aa3.29□□□□□ -1.88
DPB3YBR278W FRE3Q08905 711 aa3.29□□□□□ -1.88
DPB3YBR278W FRE7Q12333 620 aa3.29□□□□□ -1.88
DPB3YBR278W AFI1Q99222 893 aa3.29□□□□□ -1.88
DPB3YBR278W ERG11P10614 530 aa3.28□□□□□ -1.88
DPB3YBR278W MDH1P17505 334 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms