RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W CDC123Q05791 360 aa5.63□□□□□ -1.51
SHM1YBR263W STE23Q06010 1027 aa5.63□□□□□ -1.51
SHM1YBR263W YET3Q07451 203 aa5.63□□□□□ -1.51
SHM1YBR263W YKL068W-AQ3E826 78 aa5.63□□□□□ -1.51
SHM1YBR263W RNA1P11745 407 aaKnown RBP5.62□□□□□ -1.51
SHM1YBR263W GLN4P13188 809 aaKnown RBP5.62□□□□□ -1.51
SHM1YBR263W AMD1P15274 810 aaKnown RBP5.62□□□□□ -1.51
SHM1YBR263W GAL11P19659 1081 aa5.62□□□□□ -1.51
SHM1YBR263W BEM1P29366 551 aa5.62□□□□□ -1.51
SHM1YBR263W MRPL9P31334 269 aa5.62□□□□□ -1.51
SHM1YBR263W TCD2P36101 447 aaKnown RBP5.62□□□□□ -1.51
SHM1YBR263W LDB7P38210 180 aa5.62□□□□□ -1.51
SHM1YBR263W AIM3P38266 947 aaKnown RBP5.62□□□□□ -1.51
SHM1YBR263W YBR259WP38338 688 aa5.62□□□□□ -1.51
SHM1YBR263W YHI9P38765 294 aa5.62□□□□□ -1.51
SHM1YBR263W YHR078WP38799 552 aa5.62□□□□□ -1.51
SHM1YBR263W LRP1P38801 184 aaKnown RBP5.62□□□□□ -1.51
SHM1YBR263W SHU2P38957 223 aa5.62□□□□□ -1.51
SHM1YBR263W TIM17P39515 158 aa5.62□□□□□ -1.51
SHM1YBR263W PEX8P53248 589 aa5.62□□□□□ -1.51
SHM1YBR263W FRE4P53746 719 aa5.62□□□□□ -1.51
SHM1YBR263W MRPL22P53881 309 aa5.62□□□□□ -1.51
SHM1YBR263W YNL143CP53908 130 aa5.62□□□□□ -1.51
SHM1YBR263W KTR5P53966 522 aaPredicted RBP5.62□□□□□ -1.51
SHM1YBR263W PET117Q02771 107 aa5.62□□□□□ -1.51
SHM1YBR263W TFB2Q02939 513 aa5.62□□□□□ -1.51
SHM1YBR263W RPN9Q04062 393 aaKnown RBP5.62□□□□□ -1.51
SHM1YBR263W SFH1Q06168 426 aa5.62□□□□□ -1.51
SHM1YBR263W MSB2P32334 1306 aa5.61□□□□□ -1.51
SHM1YBR263W NSP1P14907 823 aaKnown RBP5.61□□□□□ -1.51
SHM1YBR263W CCR4P31384 837 aaKnown RBP5.61□□□□□ -1.51
SHM1YBR263W RML2P32611 393 aa5.61□□□□□ -1.51
SHM1YBR263W BEM3P32873 1128 aa5.61□□□□□ -1.51
SHM1YBR263W YAR028WP39548 234 aa5.61□□□□□ -1.51
SHM1YBR263W RPH1P39956 796 aa5.61□□□□□ -1.51
SHM1YBR263W ALG8P40351 577 aa5.61□□□□□ -1.51
SHM1YBR263W RTS3P53289 263 aa5.61□□□□□ -1.51
SHM1YBR263W BUD32P53323 261 aa5.61□□□□□ -1.51
SHM1YBR263W NOG1Q02892 647 aaKnown RBP5.61□□□□□ -1.51
SHM1YBR263W YML053CQ04978 212 aa5.61□□□□□ -1.51
SHM1YBR263W HEL2Q05580 639 aaKnown RBP5.61□□□□□ -1.51
SHM1YBR263W NUT2Q06213 157 aa5.61□□□□□ -1.51
SHM1YBR263W ADY3Q07732 790 aa5.61□□□□□ -1.51
SHM1YBR263W SAM4Q08985 325 aaKnown RBP5.61□□□□□ -1.51
SHM1YBR263W GNT1Q12096 491 aa5.61□□□□□ -1.51
SHM1YBR263W NOP58Q12499 511 aaKnown RBP5.61□□□□□ -1.51
SHM1YBR263W SPS1P08458 490 aa5.6□□□□□ -1.51
SHM1YBR263W SSC1P0CS90 654 aaKnown RBP5.6□□□□□ -1.51
SHM1YBR263W UBA1P22515 1024 aaKnown RBP5.6□□□□□ -1.51
SHM1YBR263W SEC14P24280 304 aaKnown RBP5.6□□□□□ -1.51
SHM1YBR263W YCR099CP25657 155 aa5.6□□□□□ -1.51
SHM1YBR263W SPS19P32573 292 aaKnown RBP5.6□□□□□ -1.51
SHM1YBR263W LTV1P34078 463 aa5.6□□□□□ -1.51
SHM1YBR263W SET3P36124 751 aa5.6□□□□□ -1.51
SHM1YBR263W MAK5P38112 773 aaPredicted RBP5.6□□□□□ -1.51
SHM1YBR263W WSC4P38739 605 aa5.6□□□□□ -1.51
SHM1YBR263W MNN1P39106 762 aa5.6□□□□□ -1.51
SHM1YBR263W NBP35P52920 328 aa5.6□□□□□ -1.51
SHM1YBR263W LSC1P53598 329 aaKnown RBP5.6□□□□□ -1.51
SHM1YBR263W YDR109CQ04585 715 aa5.6□□□□□ -1.51
SHM1YBR263W JIP5Q06214 492 aaPredicted RBP5.6□□□□□ -1.51
SHM1YBR263W ATG10Q07879 167 aa5.6□□□□□ -1.51
SHM1YBR263W HRK1Q08732 759 aaKnown RBP5.6□□□□□ -1.51
SHM1YBR263W YBL113CQ7M4S9 792 aa5.6□□□□□ -1.51
SHM1YBR263W UBR1P19812 1950 aa5.6□□□□□ -1.51
SHM1YBR263W STE2D6VTK4 431 aa5.59□□□□□ -1.51
SHM1YBR263W SAM35P14693 329 aa5.59□□□□□ -1.51
SHM1YBR263W APA1P16550 321 aaKnown RBP5.59□□□□□ -1.51
SHM1YBR263W PHO3P24031 467 aa5.59□□□□□ -1.51
SHM1YBR263W HRR25P29295 494 aaKnown RBP5.59□□□□□ -1.51
SHM1YBR263W CDC3P32457 520 aaKnown RBP5.59□□□□□ -1.51
SHM1YBR263W CYM1P32898 989 aa5.59□□□□□ -1.51
SHM1YBR263W TOM20P35180 183 aa5.59□□□□□ -1.51
SHM1YBR263W OAF3P36023 863 aa5.59□□□□□ -1.51
SHM1YBR263W TAE1P38340 232 aa5.59□□□□□ -1.51
SHM1YBR263W SRP72P38688 640 aaKnown RBP5.59□□□□□ -1.51
SHM1YBR263W YJR061WP40355 935 aa5.59□□□□□ -1.51
SHM1YBR263W YJL107CP42947 387 aa5.59□□□□□ -1.51
SHM1YBR263W SAM37P50110 327 aa5.59□□□□□ -1.51
SHM1YBR263W SWC4P53201 476 aa5.59□□□□□ -1.51
SHM1YBR263W BIO4P53630 237 aa5.59□□□□□ -1.51
SHM1YBR263W CIA1Q05583 330 aa5.59□□□□□ -1.51
SHM1YBR263W TDA5Q06417 326 aaKnown RBP5.59□□□□□ -1.51
SHM1YBR263W HBT1Q07653 1046 aaKnown RBP5.59□□□□□ -1.51
SHM1YBR263W OPI10Q08202 246 aa5.59□□□□□ -1.51
SHM1YBR263W SMF3Q12078 473 aaPredicted RBP5.59□□□□□ -1.51
SHM1YBR263W YMR030W-AQ3E760 96 aa5.59□□□□□ -1.51
SHM1YBR263W NAG1Q8TGN9 163 aa5.59□□□□□ -1.51
SHM1YBR263W EPT1P22140 391 aa5.58□□□□□ -1.52
SHM1YBR263W RIM1P32445 135 aaKnown RBP5.58□□□□□ -1.52
SHM1YBR263W YSW1P38280 609 aa5.58□□□□□ -1.52
SHM1YBR263W BAT1P38891 393 aaKnown RBP5.58□□□□□ -1.52
SHM1YBR263W STN1P38960 494 aa5.58□□□□□ -1.52
SHM1YBR263W SSP120P39931 234 aaKnown RBP5.58□□□□□ -1.52
SHM1YBR263W IRR1P40541 1150 aa5.58□□□□□ -1.52
SHM1YBR263W IME4P41833 600 aa5.58□□□□□ -1.52
SHM1YBR263W CTK3P46963 296 aaPredicted RBP5.58□□□□□ -1.52
SHM1YBR263W COQ5P49017 307 aa5.58□□□□□ -1.52
SHM1YBR263W SNO2P53823 222 aa5.58□□□□□ -1.52
SHM1YBR263W ARP4P80428 489 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms