RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	RER1	P25560	188 aa		4.57	□□□□□ -1.68
UBS1	YBR165W	YJL068C	P40363	299 aa		4.57	□□□□□ -1.68
UBS1	YBR165W	RTS3	P53289	263 aa		4.57	□□□□□ -1.68
UBS1	YBR165W	TDA7	P53882	636 aa	Predicted RBP	4.57	□□□□□ -1.68
UBS1	YBR165W	RPM2	Q02773	1202 aa		4.57	□□□□□ -1.68
UBS1	YBR165W	SSK1	Q07084	712 aa		4.57	□□□□□ -1.68
UBS1	YBR165W	ENT4	Q07872	247 aa		4.57	□□□□□ -1.68
UBS1	YBR165W	BUD5	P25300	642 aa	Predicted RBP	4.56	□□□□□ -1.68
UBS1	YBR165W	CMK1	P27466	446 aa	Known RBP	4.56	□□□□□ -1.68
UBS1	YBR165W	AGP2	P38090	596 aa		4.56	□□□□□ -1.68
UBS1	YBR165W	LAG1	P38703	411 aa		4.56	□□□□□ -1.68
UBS1	YBR165W	RRP3	P38712	501 aa	Known RBP	4.56	□□□□□ -1.68
UBS1	YBR165W	BSC5	P53755	489 aa		4.56	□□□□□ -1.68
UBS1	YBR165W	FMP45	Q07651	309 aa		4.56	□□□□□ -1.68
UBS1	YBR165W	GRC3	Q07845	632 aa		4.56	□□□□□ -1.68
UBS1	YBR165W	YPL272C	Q08984	517 aa		4.56	□□□□□ -1.68
UBS1	YBR165W	CDC24	P11433	854 aa	Predicted RBP	4.55	□□□□□ -1.68
UBS1	YBR165W	RPS2	P25443	254 aa	Known RBP	4.55	□□□□□ -1.68
UBS1	YBR165W	LOS1	P33418	1100 aa	Predicted RBP	4.55	□□□□□ -1.68
UBS1	YBR165W	ROT2	P38138	954 aa		4.55	□□□□□ -1.68
UBS1	YBR165W	RTS1	P38903	757 aa		4.55	□□□□□ -1.68
UBS1	YBR165W	AXL1	P40851	1208 aa		4.55	□□□□□ -1.68
UBS1	YBR165W	LYS4	P49367	693 aa	Predicted RBP	4.55	□□□□□ -1.68
UBS1	YBR165W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
UBS1	YBR165W	EFM6	P53970	246 aa		4.55	□□□□□ -1.68
UBS1	YBR165W	YVH1	Q02256	364 aa	Known RBP	4.55	□□□□□ -1.68
UBS1	YBR165W	YMR160W	Q03823	816 aa		4.55	□□□□□ -1.68
UBS1	YBR165W	THI20	Q08224	551 aa		4.55	□□□□□ -1.68
UBS1	YBR165W	TCO89	Q08921	799 aa		4.55	□□□□□ -1.68
UBS1	YBR165W	PDH1	Q12428	516 aa	Known RBP	4.55	□□□□□ -1.68
UBS1	YBR165W	SYN8	P31377	255 aa		4.54	□□□□□ -1.68
UBS1	YBR165W	MTR2	P34232	184 aa	Known RBP	4.54	□□□□□ -1.68
UBS1	YBR165W	DPH1	P40487	425 aa	Known RBP	4.54	□□□□□ -1.68
UBS1	YBR165W	IMP4	P53941	290 aa	Known RBP	4.54	□□□□□ -1.68
UBS1	YBR165W	RHO4	Q00246	291 aa		4.54	□□□□□ -1.68
UBS1	YBR165W	RSM23	Q01163	450 aa		4.54	□□□□□ -1.68
UBS1	YBR165W	RAD30	Q04049	632 aa		4.54	□□□□□ -1.68
UBS1	YBR165W	RBA50	Q04418	439 aa		4.54	□□□□□ -1.68
UBS1	YBR165W	DIC1	Q06143	298 aa		4.54	□□□□□ -1.68
UBS1	YBR165W	ECM30	Q06673	1274 aa		4.54	□□□□□ -1.68
UBS1	YBR165W	VIP1	Q06685	1146 aa	Known RBP	4.54	□□□□□ -1.68
UBS1	YBR165W	OPY2	Q06810	360 aa		4.54	□□□□□ -1.68
UBS1	YBR165W	TEN1	Q07921	160 aa		4.54	□□□□□ -1.68
UBS1	YBR165W	SKM1	Q12469	655 aa		4.54	□□□□□ -1.68
UBS1	YBR165W	RPL19A	P0CX82	189 aa	Known RBP	4.53	□□□□□ -1.68
UBS1	YBR165W	RPL19B	P0CX83	189 aa	Predicted RBP	4.53	□□□□□ -1.68
UBS1	YBR165W	TRX2	P22803	104 aa	Known RBP	4.53	□□□□□ -1.68
UBS1	YBR165W	PRO3	P32263	286 aa	Known RBP	4.53	□□□□□ -1.68
UBS1	YBR165W	YKL100C	P34248	587 aa		4.53	□□□□□ -1.68
UBS1	YBR165W	SAM50	P53969	484 aa		4.53	□□□□□ -1.68
UBS1	YBR165W	YSA1	Q01976	231 aa		4.53	□□□□□ -1.68
UBS1	YBR165W	PRE8	P23639	250 aa		4.52	□□□□□ -1.69
UBS1	YBR165W	PUP3	P25451	205 aa	Known RBP	4.52	□□□□□ -1.69
UBS1	YBR165W	VPS17	P32913	551 aa		4.52	□□□□□ -1.69
UBS1	YBR165W	ECM15	P35195	104 aa		4.52	□□□□□ -1.69
UBS1	YBR165W	MAL33	P38157	468 aa		4.52	□□□□□ -1.69
UBS1	YBR165W	MDM31	P38880	579 aa		4.52	□□□□□ -1.69
UBS1	YBR165W	FAR3	P46671	204 aa		4.52	□□□□□ -1.69
UBS1	YBR165W	DPB4	Q04603	196 aa	Known RBP	4.52	□□□□□ -1.69
UBS1	YBR165W	PPT2	Q12036	173 aa		4.52	□□□□□ -1.69
UBS1	YBR165W	PRP16	P15938	1071 aa	Predicted RBP	4.51	□□□□□ -1.69
UBS1	YBR165W	DPB3	P27344	201 aa		4.51	□□□□□ -1.69
UBS1	YBR165W	AUR1	P36107	401 aa	Predicted RBP	4.51	□□□□□ -1.69
UBS1	YBR165W	NUP133	P36161	1157 aa		4.51	□□□□□ -1.69
UBS1	YBR165W	IKS1	P47042	667 aa		4.51	□□□□□ -1.69
UBS1	YBR165W	APT1	P49435	187 aa	Known RBP	4.51	□□□□□ -1.69
UBS1	YBR165W	YGL082W	P53155	381 aa		4.51	□□□□□ -1.69
UBS1	YBR165W	YGR127W	P53275	312 aa		4.51	□□□□□ -1.69
UBS1	YBR165W	YPL014W	Q02606	381 aa		4.51	□□□□□ -1.69
UBS1	YBR165W	YKU80	Q04437	629 aa		4.51	□□□□□ -1.69
UBS1	YBR165W	RPL15A	P05748	204 aa	Known RBP	4.5	□□□□□ -1.69
UBS1	YBR165W	KGD1	P20967	1014 aa	Known RBP	4.5	□□□□□ -1.69
UBS1	YBR165W	BOS1	P25385	244 aa		4.5	□□□□□ -1.69
UBS1	YBR165W	YBL055C	P34220	418 aa	Predicted RBP	4.5	□□□□□ -1.69
UBS1	YBR165W	KRE9	P39005	276 aa		4.5	□□□□□ -1.69
UBS1	YBR165W	SMM1	P53720	384 aa	Known RBP	4.5	□□□□□ -1.69
UBS1	YBR165W	MSC1	Q03104	513 aa		4.5	□□□□□ -1.69
UBS1	YBR165W	YMR087W	Q04299	284 aa		4.5	□□□□□ -1.69
UBS1	YBR165W	ERP1	Q05359	219 aa	Known RBP	4.5	□□□□□ -1.69
UBS1	YBR165W	CDC45	Q08032	650 aa		4.5	□□□□□ -1.69
UBS1	YBR165W	SDH5	Q08230	162 aa		4.5	□□□□□ -1.69
UBS1	YBR165W	ARD1	P07347	238 aa	Predicted RBP	4.49	□□□□□ -1.69
UBS1	YBR165W	KAR3	P17119	729 aa		4.49	□□□□□ -1.69
UBS1	YBR165W	BUD14	P27637	709 aa		4.49	□□□□□ -1.69
UBS1	YBR165W	YNK1	P36010	153 aa	Known RBP	4.49	□□□□□ -1.69
UBS1	YBR165W	CSM2	P40465	213 aa		4.49	□□□□□ -1.69
UBS1	YBR165W	PTR3	P43606	678 aa		4.49	□□□□□ -1.69
UBS1	YBR165W	ROK1	P45818	564 aa	Predicted RBP	4.49	□□□□□ -1.69
UBS1	YBR165W	MEP3	P53390	489 aa		4.49	□□□□□ -1.69
UBS1	YBR165W	MF(ALPHA)1	P01149	165 aa		4.48	□□□□□ -1.69
UBS1	YBR165W	SEC62	P21825	274 aa		4.48	□□□□□ -1.69
UBS1	YBR165W	SGV1	P23293	657 aa	Known RBP	4.48	□□□□□ -1.69
UBS1	YBR165W	SSE2	P32590	693 aa	Known RBP	4.48	□□□□□ -1.69
UBS1	YBR165W	SIP2	P34164	415 aa	Known RBP	4.48	□□□□□ -1.69
UBS1	YBR165W	RTT101	P47050	842 aa		4.48	□□□□□ -1.69
UBS1	YBR165W	YDL186W	P48568	277 aa		4.48	□□□□□ -1.69
UBS1	YBR165W	COS10	P52924	374 aa		4.48	□□□□□ -1.69
UBS1	YBR165W	NCE102	Q12207	173 aa	RIP-Chip data	4.48	□□□□□ -1.69	not detected
UBS1	YBR165W	PEP5	P12868	1029 aa		4.47	□□□□□ -1.69
UBS1	YBR165W	IMG1	P25626	169 aa		4.47	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms