RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W MF(ALPHA)1P01149 165 aa5.01□□□□□ -1.61
CKS1YBR135W KRS1P15180 591 aaKnown RBP5.01□□□□□ -1.61
CKS1YBR135W CKA1P15790 372 aa5.01□□□□□ -1.61
CKS1YBR135W TKL1P23254 680 aaKnown RBP5.01□□□□□ -1.61
CKS1YBR135W CLB2P24869 491 aa5.01□□□□□ -1.61
CKS1YBR135W REG2P38232 338 aa5.01□□□□□ -1.61
CKS1YBR135W ELO1P39540 310 aa5.01□□□□□ -1.61
CKS1YBR135W YGR066CP53242 292 aa5.01□□□□□ -1.61
CKS1YBR135W EFM6P53970 246 aa5.01□□□□□ -1.61
CKS1YBR135W YMR178WQ03219 274 aaKnown RBP5.01□□□□□ -1.61
CKS1YBR135W SPC19Q03954 165 aa5.01□□□□□ -1.61
CKS1YBR135W UTP21Q06078 939 aaPredicted RBP5.01□□□□□ -1.61
CKS1YBR135W LUC7Q07508 261 aaPredicted RBP5.01□□□□□ -1.61
CKS1YBR135W RTT109Q07794 436 aa5.01□□□□□ -1.61
CKS1YBR135W BUD7Q08754 746 aa5.01□□□□□ -1.61
CKS1YBR135W PFA4Q12006 378 aa5.01□□□□□ -1.61
CKS1YBR135W HSH49Q99181 213 aaPredicted RBP5.01□□□□□ -1.61
CKS1YBR135W SRB8P25648 1427 aa5□□□□□ -1.61
CKS1YBR135W PGK1P00560 416 aaKnown RBP5□□□□□ -1.61
CKS1YBR135W APN1P22936 367 aa5□□□□□ -1.61
CKS1YBR135W COQ3P27680 312 aa5□□□□□ -1.61
CKS1YBR135W SAC1P32368 623 aaKnown RBP5□□□□□ -1.61
CKS1YBR135W PEX2P32800 271 aa5□□□□□ -1.61
CKS1YBR135W NPL6P32832 435 aa5□□□□□ -1.61
CKS1YBR135W YEL057CP39983 233 aa5□□□□□ -1.61
CKS1YBR135W SNO3P43544 222 aa5□□□□□ -1.61
CKS1YBR135W NNF2P53253 936 aa5□□□□□ -1.61
CKS1YBR135W YTP1P53584 459 aa5□□□□□ -1.61
CKS1YBR135W IDP3P53982 420 aaKnown RBP5□□□□□ -1.61
CKS1YBR135W ASI1P54074 624 aa5□□□□□ -1.61
CKS1YBR135W RSC9Q03124 581 aa5□□□□□ -1.61
CKS1YBR135W YLR287CQ05881 355 aa5□□□□□ -1.61
CKS1YBR135W FMP40Q08968 688 aaPredicted RBP5□□□□□ -1.61
CKS1YBR135W LEU9Q12166 604 aaKnown RBP5□□□□□ -1.61
CKS1YBR135W NDJ1Q12366 352 aa5□□□□□ -1.61
CKS1YBR135W MET17P06106 444 aa4.99□□□□□ -1.61
CKS1YBR135W DFR1P07807 211 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
CKS1YBR135W NUP1P20676 1076 aa4.99□□□□□ -1.61
CKS1YBR135W SPE2P21182 396 aa4.99□□□□□ -1.61
CKS1YBR135W ROX1P25042 368 aa4.99□□□□□ -1.61
CKS1YBR135W PUP3P25451 205 aaKnown RBP4.99□□□□□ -1.61
CKS1YBR135W SSE2P32590 693 aaKnown RBP4.99□□□□□ -1.61
CKS1YBR135W CUE2P36075 443 aaKnown RBP4.99□□□□□ -1.61
CKS1YBR135W VPS41P38959 992 aa4.99□□□□□ -1.61
CKS1YBR135W ATF1P40353 525 aa4.99□□□□□ -1.61
CKS1YBR135W SGN1P40561 250 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
CKS1YBR135W MET28P40573 187 aa4.99□□□□□ -1.61
CKS1YBR135W FAR3P46671 204 aa4.99□□□□□ -1.61
CKS1YBR135W IRC8P47046 822 aa4.99□□□□□ -1.61
CKS1YBR135W APT1P49435 187 aaKnown RBP4.99□□□□□ -1.61
CKS1YBR135W GIR2Q03768 265 aaPredicted RBP4.99□□□□□ -1.61
CKS1YBR135W SWF1Q04629 336 aa4.99□□□□□ -1.61
CKS1YBR135W COQ11Q05892 277 aa4.99□□□□□ -1.61
CKS1YBR135W ETT1Q08421 412 aaKnown RBP4.99□□□□□ -1.61
CKS1YBR135W APL4Q12028 832 aa4.99□□□□□ -1.61
CKS1YBR135W PGA3Q12746 312 aaKnown RBP4.99□□□□□ -1.61
CKS1YBR135W GAL4P04386 881 aa4.98□□□□□ -1.61
CKS1YBR135W YMR085WP0CF18 432 aa4.98□□□□□ -1.61
CKS1YBR135W RED1P14291 827 aa4.98□□□□□ -1.61
CKS1YBR135W KGD1P20967 1014 aaKnown RBP4.98□□□□□ -1.61
CKS1YBR135W LCB1P25045 558 aaKnown RBP4.98□□□□□ -1.61
CKS1YBR135W SYN8P31377 255 aa4.98□□□□□ -1.61
CKS1YBR135W TSC10P38342 320 aa4.98□□□□□ -1.61
CKS1YBR135W AFG3P39925 761 aa4.98□□□□□ -1.61
CKS1YBR135W VID30P53076 958 aa4.98□□□□□ -1.61
CKS1YBR135W DPB4Q04603 196 aaKnown RBP4.98□□□□□ -1.61
CKS1YBR135W FRE3Q08905 711 aa4.98□□□□□ -1.61
CKS1YBR135W YNL162W-AQ3E7A8 72 aa4.98□□□□□ -1.61
CKS1YBR135W CNA1P23287 553 aa4.97□□□□□ -1.61
CKS1YBR135W ERG3P32353 365 aa4.97□□□□□ -1.61
CKS1YBR135W TIF3P34167 436 aaKnown RBP4.97□□□□□ -1.61
CKS1YBR135W MET18P40469 1032 aa4.97□□□□□ -1.61
CKS1YBR135W VTC2P43585 828 aa4.97□□□□□ -1.61
CKS1YBR135W ROK1P45818 564 aaPredicted RBP4.97□□□□□ -1.61
CKS1YBR135W LYS20P48570 428 aaKnown RBP4.97□□□□□ -1.61
CKS1YBR135W UBP8P50102 471 aa4.97□□□□□ -1.61
CKS1YBR135W YGR127WP53275 312 aa4.97□□□□□ -1.61
CKS1YBR135W COP1P53622 1201 aaKnown RBP4.97□□□□□ -1.61
CKS1YBR135W SYF1Q04048 859 aaPredicted RBP4.97□□□□□ -1.61
CKS1YBR135W SEG1Q04279 960 aa4.97□□□□□ -1.61
CKS1YBR135W GRX6Q12438 231 aa4.97□□□□□ -1.61
CKS1YBR135W EST1P17214 699 aaPredicted RBP4.96□□□□□ -1.62
CKS1YBR135W YBR144CP34215 104 aa4.96□□□□□ -1.62
CKS1YBR135W YBL055CP34220 418 aaPredicted RBP4.96□□□□□ -1.62
CKS1YBR135W SEF1P34228 1148 aa4.96□□□□□ -1.62
CKS1YBR135W MIA40P36046 403 aa4.96□□□□□ -1.62
CKS1YBR135W NUP133P36161 1157 aa4.96□□□□□ -1.62
CKS1YBR135W RKM3P38222 552 aa4.96□□□□□ -1.62
CKS1YBR135W ARP1P38696 384 aa4.96□□□□□ -1.62
CKS1YBR135W MAF1P41910 395 aa4.96□□□□□ -1.62
CKS1YBR135W JJJ1P53863 590 aa4.96□□□□□ -1.62
CKS1YBR135W ERG13P54839 491 aaKnown RBP4.96□□□□□ -1.62
CKS1YBR135W VPS38Q05919 439 aa4.96□□□□□ -1.62
CKS1YBR135W THI7Q05998 598 aa4.96□□□□□ -1.62
CKS1YBR135W GRC3Q07845 632 aa4.96□□□□□ -1.62
CKS1YBR135W RRI1Q12468 440 aa4.96□□□□□ -1.62
CKS1YBR135W AVL9Q12500 764 aa4.96□□□□□ -1.62
CKS1YBR135W TAD3Q9URQ3 322 aa4.96□□□□□ -1.62
CKS1YBR135W FUR1P18562 216 aaKnown RBP4.95□□□□□ -1.62
CKS1YBR135W IMG1P25626 169 aa4.95□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms