RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSA1	YAL005C	RIF2	Q06208	395 aa		13.21	□□□□□ -0.29
SSA1	YAL005C	HDA3	Q06623	655 aa		13.21	□□□□□ -0.29
SSA1	YAL005C	VAM6	Q07468	1049 aa		13.21	□□□□□ -0.29
SSA1	YAL005C	NKP1	Q12493	238 aa		13.21	□□□□□ -0.29
SSA1	YAL005C	TUB1	P09733	447 aa	Known RBP	13.21	□□□□□ -0.3
SSA1	YAL005C	KAR1	P11927	433 aa		13.21	□□□□□ -0.3
SSA1	YAL005C	SEC15	P22224	910 aa		13.21	□□□□□ -0.3
SSA1	YAL005C	PHO84	P25297	587 aa	Known RBP	13.21	□□□□□ -0.3
SSA1	YAL005C	CIN8	P27895	1000 aa		13.21	□□□□□ -0.3
SSA1	YAL005C	SLX5	P32828	619 aa	Known RBP	13.21	□□□□□ -0.3
SSA1	YAL005C	PTH2	P34222	208 aa		13.21	□□□□□ -0.3
SSA1	YAL005C	YKL151C	P36059	337 aa		13.21	□□□□□ -0.3
SSA1	YAL005C	YHR045W	P38775	560 aa		13.21	□□□□□ -0.3
SSA1	YAL005C	LSM5	P40089	93 aa	Known RBP	13.21	□□□□□ -0.3
SSA1	YAL005C	LSM3	P57743	89 aa	Known RBP	13.21	□□□□□ -0.3
SSA1	YAL005C	VPS16	Q03308	798 aa		13.21	□□□□□ -0.3
SSA1	YAL005C	HEM2	P05373	342 aa		13.2	□□□□□ -0.3
SSA1	YAL005C	SPT15	P13393	240 aa	Known RBP	13.2	□□□□□ -0.3
SSA1	YAL005C	VPS34	P22543	875 aa		13.2	□□□□□ -0.3
SSA1	YAL005C	NPP1	P25353	742 aa		13.2	□□□□□ -0.3
SSA1	YAL005C	RSC6	P25632	483 aa		13.2	□□□□□ -0.3
SSA1	YAL005C	EAP1	P36041	632 aa	Known RBP	13.2	□□□□□ -0.3
SSA1	YAL005C	WSC4	P38739	605 aa		13.2	□□□□□ -0.3
SSA1	YAL005C	UBP6	P43593	499 aa	Known RBP	13.2	□□□□□ -0.3
SSA1	YAL005C	NNF1	P47149	201 aa		13.2	□□□□□ -0.3
SSA1	YAL005C	HST3	P53687	447 aa		13.2	□□□□□ -0.3
SSA1	YAL005C	IBD2	P53892	351 aa		13.2	□□□□□ -0.3
SSA1	YAL005C	FUM1	P08417	488 aa	Known RBP	13.19	□□□□□ -0.3
SSA1	YAL005C	YAR066W	P0CX18	203 aa		13.19	□□□□□ -0.3
SSA1	YAL005C	YHR214W	P0CX19	203 aa		13.19	□□□□□ -0.3
SSA1	YAL005C	MRE11	P32829	692 aa		13.19	□□□□□ -0.3
SSA1	YAL005C	BAT1	P38891	393 aa	Known RBP	13.19	□□□□□ -0.3
SSA1	YAL005C	UTP18	P40362	594 aa	Predicted RBP	13.19	□□□□□ -0.3
SSA1	YAL005C	YRB1	P41920	201 aa	Known RBP	13.19	□□□□□ -0.3
SSA1	YAL005C	CCE1	Q03702	353 aa		13.19	□□□□□ -0.3
SSA1	YAL005C	MSB2	P32334	1306 aa		13.19	□□□□□ -0.3
SSA1	YAL005C	YSR3	P23501	404 aa		13.19	□□□□□ -0.3
SSA1	YAL005C	SNT1	P25357	1226 aa		13.19	□□□□□ -0.3
SSA1	YAL005C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	13.19	□□□□□ -0.3	not detected
SSA1	YAL005C	SHU2	P38957	223 aa		13.19	□□□□□ -0.3
SSA1	YAL005C	DHH1	P39517	506 aa	Known RBP	13.19	□□□□□ -0.3
SSA1	YAL005C	MEP1	P40260	492 aa		13.19	□□□□□ -0.3
SSA1	YAL005C	YFR018C	P43599	363 aa		13.19	□□□□□ -0.3
SSA1	YAL005C	MRM2	P53123	320 aa		13.19	□□□□□ -0.3
SSA1	YAL005C	TGL2	P54857	326 aa		13.19	□□□□□ -0.3
SSA1	YAL005C	YPL113C	Q02961	396 aa		13.19	□□□□□ -0.3
SSA1	YAL005C	PST1	Q12355	444 aa		13.19	□□□□□ -0.3
SSA1	YAL005C	INH1	P01097	85 aa		13.18	□□□□□ -0.3
SSA1	YAL005C	CDC21	P06785	304 aa		13.18	□□□□□ -0.3
SSA1	YAL005C	NMT1	P14743	455 aa		13.18	□□□□□ -0.3
SSA1	YAL005C	ATP11	P32453	318 aa		13.18	□□□□□ -0.3
SSA1	YAL005C	CTP1	P38152	299 aa		13.18	□□□□□ -0.3
SSA1	YAL005C	RIM11	P38615	370 aa		13.18	□□□□□ -0.3
SSA1	YAL005C	STB2	P46679	850 aa		13.18	□□□□□ -0.3
SSA1	YAL005C	RNR4	P49723	345 aa	Known RBP	13.18	□□□□□ -0.3
SSA1	YAL005C	EFM5	P53200	248 aa	Known RBP	13.18	□□□□□ -0.3
SSA1	YAL005C	VPS68	Q12016	184 aa		13.18	□□□□□ -0.3
SSA1	YAL005C	GUK1	P15454	187 aa	Known RBP	13.17	□□□□□ -0.3
SSA1	YAL005C	SRX1	P36077	127 aa		13.17	□□□□□ -0.3
SSA1	YAL005C	YJL070C	P40361	888 aa		13.17	□□□□□ -0.3
SSA1	YAL005C	PRP3	Q03338	469 aa	Predicted RBP	13.17	□□□□□ -0.3
SSA1	YAL005C	GAS3	Q03655	524 aa		13.17	□□□□□ -0.3
SSA1	YAL005C	YML053C	Q04978	212 aa		13.17	□□□□□ -0.3
SSA1	YAL005C	SWI5	P08153	709 aa		13.17	□□□□□ -0.3
SSA1	YAL005C	TIF34	P40217	347 aa	Known RBP	13.17	□□□□□ -0.3
SSA1	YAL005C	YJR154W	P47181	346 aa		13.17	□□□□□ -0.3
SSA1	YAL005C	CAF120	P53836	1060 aa		13.17	□□□□□ -0.3
SSA1	YAL005C	ECM9	Q02202	377 aa		13.17	□□□□□ -0.3
SSA1	YAL005C	YOL019W	Q08157	551 aa		13.17	□□□□□ -0.3
SSA1	YAL005C	POL30	P15873	258 aa	Known RBP	13.16	□□□□□ -0.3
SSA1	YAL005C	YPT52	P36018	234 aa	Known RBP	13.16	□□□□□ -0.3
SSA1	YAL005C	ERP5	P38819	212 aa		13.16	□□□□□ -0.3
SSA1	YAL005C	PFS1	P38872	237 aa		13.16	□□□□□ -0.3
SSA1	YAL005C	CCT6	P39079	546 aa		13.16	□□□□□ -0.3
SSA1	YAL005C	NPT1	P39683	429 aa	Known RBP	13.16	□□□□□ -0.3
SSA1	YAL005C	YEL073C	P39974	107 aa		13.16	□□□□□ -0.3
SSA1	YAL005C	SLM2	P53955	656 aa		13.16	□□□□□ -0.3
SSA1	YAL005C	RPL5	P26321	297 aa	Known RBP	13.15	□□□□□ -0.3
SSA1	YAL005C	RPF2	P36160	344 aa	Known RBP	13.15	□□□□□ -0.3
SSA1	YAL005C	RRP3	P38712	501 aa	Known RBP	13.15	□□□□□ -0.3
SSA1	YAL005C	SHY1	P53266	389 aa		13.15	□□□□□ -0.3
SSA1	YAL005C	PRP16	P15938	1071 aa	Predicted RBP	13.15	□□□□□ -0.3
SSA1	YAL005C	PRP4	P20053	465 aa	Known RBP	13.15	□□□□□ -0.3
SSA1	YAL005C	SDH3	P33421	198 aa		13.15	□□□□□ -0.3
SSA1	YAL005C	SOL2	P37262	315 aa		13.15	□□□□□ -0.3
SSA1	YAL005C	BZZ1	P38822	633 aa		13.15	□□□□□ -0.3
SSA1	YAL005C	GPI8	P49018	411 aa		13.15	□□□□□ -0.3
SSA1	YAL005C	AAT1	Q01802	451 aa		13.15	□□□□□ -0.3
SSA1	YAL005C	SVL3	Q03088	825 aa	Known RBP	13.15	□□□□□ -0.3
SSA1	YAL005C	MET8	P15807	274 aa		13.14	□□□□□ -0.31
SSA1	YAL005C	MLS1	P30952	554 aa		13.14	□□□□□ -0.31
SSA1	YAL005C	MNN10	P50108	393 aa	Known RBP	13.14	□□□□□ -0.31
SSA1	YAL005C	ZRG17	P53735	605 aa		13.14	□□□□□ -0.31
SSA1	YAL005C	BNI4	P53858	892 aa		13.14	□□□□□ -0.31
SSA1	YAL005C	GPB1	Q08886	897 aa		13.14	□□□□□ -0.31
SSA1	YAL005C	AHA1	Q12449	350 aa	Known RBP	13.14	□□□□□ -0.31
SSA1	YAL005C	EXO70	P19658	623 aa		13.13	□□□□□ -0.31
SSA1	YAL005C	YCK2	P23292	546 aa	Known RBP	13.13	□□□□□ -0.31
SSA1	YAL005C	RFC3	P38629	340 aa		13.13	□□□□□ -0.31
SSA1	YAL005C	UBA4	P38820	440 aa		13.13	□□□□□ -0.31

Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms