RNA–Protein interactions for RNA: ENST00000636483.1

SPTAN1-232, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-232ENST00000636483 CYP27C1Q4G0S4 372 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 FNDC3BQ53EP0 1204 aaKnown RBP3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 TM4SF20Q53R12 229 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 ZC3H12BQ5HYM0 836 aaKnown RBP3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 DUSP27Q5VZP5 1158 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 RNF43Q68DV7 783 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 POMZP3Q6PJE2 187 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 ZPBP2Q6X784 338 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 USP53Q70EK8 1073 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 STRA8Q7Z7C7 330 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 SHKBP1Q8TBC3 707 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 TCTN2Q96GX1 697 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 C1orf159Q96HA4 380 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 SCLYQ96I15 445 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 HSPA12BQ96MM6 686 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 TARS2Q9BW92 718 aaKnown RBP3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 HDAC8Q9BY41 377 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 ASCC2Q9H1I8 757 aaPredicted RBP3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 NKX2-4Q9H2Z4 354 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 SLC52A2Q9HAB3 445 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 TRIM39Q9HCM9 518 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 GTF2IRD1Q9UHL9 959 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 PRKAB1Q9Y478 270 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 PCDHA9Q9Y5H5 950 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 PCDHA8Q9Y5H6 950 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 ST14Q9Y5Y6 855 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 CAPN6Q9Y6Q1 641 aa3.17□□□□□ -1.9
SPTAN1-232ENST00000636483 H3BS24 57 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 IGF2BP3O00425 579 aaKnown RBP eCLIP3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 MSCO60682 206 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 DNAJC8O75937 253 aaPredicted RBP3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 RASGRP1O95267 797 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 THBDP07204 575 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 SYPP08247 313 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 GSTM1P09488 218 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 ZNF865P0CJ78 1059 aaPredicted RBP3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 VAV1P15498 845 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 KCNA6P17658 529 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 TPP2P29144 1249 aaPredicted RBP3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 KIR3DL1P43629 444 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 NEK4P51957 841 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 SUMO1P63165 101 aaKnown RBP3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 NFKB2Q00653 900 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 POU4F1Q01851 419 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 RASSF7Q02833 373 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 NFIAQ12857 509 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 ZNF460Q14592 562 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 SLC35F1Q5T1Q4 408 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 CWF19L1Q69YN2 538 aaKnown RBP3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 LRRTM3Q86VH5 581 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 THNSL2Q86YJ6 484 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 CPNE8Q86YQ8 564 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 RPUSD2Q8IZ73 545 aaKnown RBP3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 SYNPOQ8N3V7 929 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 MFSD4AQ8N468 514 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 FRS2Q8WU20 508 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 LEO1Q8WVC0 666 aaPredicted RBP3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 STAG1Q8WVM7 1258 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 KCTD13Q8WZ19 329 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 DDX1Q92499 740 aaKnown RBP3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 COPS5Q92905 334 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 MFSD3Q96ES6 412 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 SLC12A9Q9BXP2 914 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 GPR62Q9BZJ7 368 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 MTFR1LQ9H019 292 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 CLEC1BQ9P126 229 aa3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 SF3B6Q9Y3B4 125 aaKnown RBP3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 TNPO3Q9Y5L0 923 aaKnown RBP3.16□□□□□ -1.9
SPTAN1-232ENST00000636483 DNAJC25-GNG10A0A024R161 153 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 GNAT3A8MTJ3 354 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 AURKAO14965 403 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 OPA1O60313 960 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 FKTNO75072 461 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 CRTAMO95727 393 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 SCG5P05408 212 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 GSNP06396 782 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 PLS3P13797 630 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 HOXA10P31260 410 aaPredicted RBP3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 NOP2P46087 812 aaKnown RBP3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 CDKN1CP49918 316 aaPredicted RBP3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 GABREP78334 506 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 BNIP3Q12983 259 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 FAM50AQ14320 339 aaKnown RBP3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 PLA2G4EQ3MJ16 856 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 RTP2Q5QGT7 225 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 ABHD17CQ6PCB6 329 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 ARHGAP27Q6ZUM4 889 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 KRT26Q7Z3Y9 468 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 BRAPQ7Z569 592 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 RNF180Q86T96 592 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 ALYREFQ86V81 257 aaKnown RBP3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 DDX42Q86XP3 938 aaKnown RBP eCLIP3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 CCDC103Q8IW40 242 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 SPACA3Q8IXA5 215 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 PLD6Q8N2A8 252 aaKnown RBP3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 CRACR2BQ8N4Y2 399 aaPredicted RBP3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 ZNF655Q8N720 491 aaPredicted RBP3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 PRPF38AQ8NAV1 312 aaKnown RBP3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 DAGLBQ8NCG7 672 aa3.15□□□□□ -1.91
SPTAN1-232ENST00000636483 ZCRB1Q8TBF4 217 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms