RNA–Protein interactions for RNA: ENST00000636483.1

SPTAN1-232, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-232ENST00000636483 AEBP2Q6ZN18 517 aaPredicted RBP9.64□□□□□ -0.87
SPTAN1-232ENST00000636483 CHIC1Q5VXU3 224 aa9.56□□□□□ -0.88
SPTAN1-232ENST00000636483 PHF23Q9BUL5 403 aaPredicted RBP8.52□□□□□ -1.05
SPTAN1-232ENST00000636483 SENP3Q9H4L4 574 aaPredicted RBP8.03□□□□□ -1.12
SPTAN1-232ENST00000636483 PLPPR3Q6T4P5 718 aa7.84□□□□□ -1.15
SPTAN1-232ENST00000636483 FOXD1Q16676 465 aa7.52□□□□□ -1.21
SPTAN1-232ENST00000636483 ADRA2BP18089 450 aa7.48□□□□□ -1.21
SPTAN1-232ENST00000636483 PPP6R1Q9UPN7 881 aa7.48□□□□□ -1.21
SPTAN1-232ENST00000636483 KCNA4P22459 653 aa7.12□□□□□ -1.27
SPTAN1-232ENST00000636483 PIAS4Q8N2W9 510 aaPredicted RBP7.11□□□□□ -1.27
SPTAN1-232ENST00000636483 PPP4R3CPQ6ZMV5 832 aa6.99□□□□□ -1.29
SPTAN1-232ENST00000636483 EHMT2Q96KQ7 1210 aa6.91□□□□□ -1.3
SPTAN1-232ENST00000636483 NCBP3Q53F19 620 aaKnown RBP6.8□□□□□ -1.32
SPTAN1-232ENST00000636483 NPM3O75607 178 aaKnown RBP6.78□□□□□ -1.32
SPTAN1-232ENST00000636483 SLC4A1APQ9BWU0 796 aaKnown RBP6.78□□□□□ -1.32
SPTAN1-232ENST00000636483 MAPK8IP2Q13387 824 aaPredicted RBP6.75□□□□□ -1.33
SPTAN1-232ENST00000636483 MSH5O43196 834 aa6.74□□□□□ -1.33
SPTAN1-232ENST00000636483 CSRNP3Q8WYN3 585 aa6.72□□□□□ -1.33
SPTAN1-232ENST00000636483 CNKSR2Q8WXI2 1034 aa6.7□□□□□ -1.34
SPTAN1-232ENST00000636483 SCAF1Q9H7N4 1312 aaKnown RBP6.7□□□□□ -1.34
SPTAN1-232ENST00000636483 ZBTB22O15209 634 aa6.57□□□□□ -1.36
SPTAN1-232ENST00000636483 RNF216Q9NWF9 866 aaPredicted RBP6.5□□□□□ -1.37
SPTAN1-232ENST00000636483 DMRT2Q9Y5R5 561 aa6.47□□□□□ -1.37
SPTAN1-232ENST00000636483 HOXD11P31277 338 aaPredicted RBP6.42□□□□□ -1.38
SPTAN1-232ENST00000636483 DNAJC5BQ9UF47 199 aa6.42□□□□□ -1.38
SPTAN1-232ENST00000636483 FOXD4L1Q9NU39 408 aa6.41□□□□□ -1.38
SPTAN1-232ENST00000636483 SLC4A2P04920 1241 aa6.37□□□□□ -1.39
SPTAN1-232ENST00000636483 DCAF8L1A6NGE4 600 aa6.26□□□□□ -1.41
SPTAN1-232ENST00000636483 MYCNP04198 464 aaPredicted RBP6.19□□□□□ -1.42
SPTAN1-232ENST00000636483 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.16□□□□□ -1.422e-8■■□□□ 12.8
SPTAN1-232ENST00000636483 ATF5Q9Y2D1 282 aaPredicted RBP6.14□□□□□ -1.43
SPTAN1-232ENST00000636483 ATXN8OSP0DMR3 200 aa6.12□□□□□ -1.43
SPTAN1-232ENST00000636483 U3KPZ7 1027 aaPredicted RBP6.08□□□□□ -1.44
SPTAN1-232ENST00000636483 FKBP8Q14318 412 aa6.04□□□□□ -1.44
SPTAN1-232ENST00000636483 SAMD1Q6SPF0 538 aaPredicted RBP6□□□□□ -1.45
SPTAN1-232ENST00000636483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.98□□□□□ -1.45
SPTAN1-232ENST00000636483 HNRNPUL2Q1KMD3 747 aaKnown RBP5.98□□□□□ -1.45
SPTAN1-232ENST00000636483 ZNF219Q9P2Y4 722 aaPredicted RBP5.95□□□□□ -1.46
SPTAN1-232ENST00000636483 RTN4Q9NQC3 1192 aaKnown RBP5.92□□□□□ -1.46
SPTAN1-232ENST00000636483 SPINK5Q9NQ38 1064 aaPredicted RBP5.89□□□□□ -1.47
SPTAN1-232ENST00000636483 TRHP20396 242 aaPredicted RBP5.88□□□□□ -1.47
SPTAN1-232ENST00000636483 MKRN4PQ13434 485 aaPredicted RBP5.85□□□□□ -1.47
SPTAN1-232ENST00000636483 RNF39Q9H2S5 420 aa5.84□□□□□ -1.47
SPTAN1-232ENST00000636483 CAPN15O75808 1086 aa5.83□□□□□ -1.48
SPTAN1-232ENST00000636483 APLP2Q06481 763 aa5.83□□□□□ -1.48
SPTAN1-232ENST00000636483 POLA2Q14181 598 aa5.83□□□□□ -1.48
SPTAN1-232ENST00000636483 AMER1Q5JTC6 1135 aaPredicted RBP5.82□□□□□ -1.48
SPTAN1-232ENST00000636483 POTEDQ86YR6 584 aa5.82□□□□□ -1.48
SPTAN1-232ENST00000636483 SPDYE4A6NLX3 237 aa5.79□□□□□ -1.48
SPTAN1-232ENST00000636483 ABCB7O75027 752 aa5.77□□□□□ -1.49
SPTAN1-232ENST00000636483 C1QBPQ07021 282 aaKnown RBP5.75□□□□□ -1.49
SPTAN1-232ENST00000636483 FBLN2P98095 1184 aa5.74□□□□□ -1.49
SPTAN1-232ENST00000636483 PROM2Q8N271 834 aa5.68□□□□□ -1.5
SPTAN1-232ENST00000636483 FBXO3Q9UK99 471 aa5.68□□□□□ -1.5
SPTAN1-232ENST00000636483 DSG3P32926 999 aa5.67□□□□□ -1.5
SPTAN1-232ENST00000636483 SLC24A1O60721 1099 aa5.66□□□□□ -1.5
SPTAN1-232ENST00000636483 VASPP50552 380 aaPredicted RBP5.63□□□□□ -1.51
SPTAN1-232ENST00000636483 IFNLR1Q8IU57 520 aaPredicted RBP5.63□□□□□ -1.51
SPTAN1-232ENST00000636483 ZNF692Q9BU19 519 aaPredicted RBP5.61□□□□□ -1.51
SPTAN1-232ENST00000636483 ZBTB12Q9Y330 459 aaPredicted RBP5.61□□□□□ -1.51
SPTAN1-232ENST00000636483 OSCARQ8IYS5 282 aa5.59□□□□□ -1.51
SPTAN1-232ENST00000636483 CACNB1Q02641 598 aaPredicted RBP5.56□□□□□ -1.52
SPTAN1-232ENST00000636483 PABPN1Q86U42 306 aaKnown RBP eCLIP5.55□□□□□ -1.52
SPTAN1-232ENST00000636483 KLHL34Q8N239 644 aa5.53□□□□□ -1.52
SPTAN1-232ENST00000636483 SPDYE2BA6NHP3 402 aa5.52□□□□□ -1.53
SPTAN1-232ENST00000636483 SPDYE6P0CI01 402 aa5.52□□□□□ -1.53
SPTAN1-232ENST00000636483 PKD2Q13563 968 aa5.52□□□□□ -1.53
SPTAN1-232ENST00000636483 SPDYE2Q495Y8 402 aa5.52□□□□□ -1.53
SPTAN1-232ENST00000636483 SSUH2Q9Y2M2 353 aa5.52□□□□□ -1.53
SPTAN1-232ENST00000636483 DCAF8L2P0C7V8 631 aa5.51□□□□□ -1.53
SPTAN1-232ENST00000636483 MIER1Q8N108 512 aa5.5□□□□□ -1.53
SPTAN1-232ENST00000636483 PLCD3Q8N3E9 789 aa5.49□□□□□ -1.53
SPTAN1-232ENST00000636483 STAG3Q9UJ98 1225 aa5.48□□□□□ -1.53
SPTAN1-232ENST00000636483 SPOCK2Q92563 424 aa5.47□□□□□ -1.53
SPTAN1-232ENST00000636483 ECM2O94769 699 aaPredicted RBP5.43□□□□□ -1.54
SPTAN1-232ENST00000636483 PLCB2Q00722 1185 aa5.42□□□□□ -1.54
SPTAN1-232ENST00000636483 NPM1P06748 294 aaKnown RBP eCLIP5.41□□□□□ -1.54
SPTAN1-232ENST00000636483 CIZ1Q9ULV3 898 aaPredicted RBP5.4□□□□□ -1.54
SPTAN1-232ENST00000636483 RGL2O15211 777 aa5.39□□□□□ -1.55
SPTAN1-232ENST00000636483 HAP1P54257 671 aaPredicted RBP5.39□□□□□ -1.55
SPTAN1-232ENST00000636483 CLEC11AQ9Y240 323 aa5.37□□□□□ -1.55
SPTAN1-232ENST00000636483 PLEKHG5O94827 1062 aa5.35□□□□□ -1.55
SPTAN1-232ENST00000636483 CFAP44Q96MT7 982 aa5.34□□□□□ -1.55
SPTAN1-232ENST00000636483 PAXIP1Q6ZW49 1069 aaPredicted RBP5.33□□□□□ -1.56
SPTAN1-232ENST00000636483 BBXQ8WY36 941 aaPredicted RBP5.33□□□□□ -1.56
SPTAN1-232ENST00000636483 AKT1S1Q96B36 256 aa5.33□□□□□ -1.56
SPTAN1-232ENST00000636483 PRR29P0C7W0 189 aa5.32□□□□□ -1.56
SPTAN1-232ENST00000636483 REM2Q8IYK8 340 aaPredicted RBP5.32□□□□□ -1.56
SPTAN1-232ENST00000636483 ZBTB47Q9UFB7 747 aaPredicted RBP5.32□□□□□ -1.56
SPTAN1-232ENST00000636483 CHGAP10645 457 aaKnown RBP5.31□□□□□ -1.56
SPTAN1-232ENST00000636483 NUBP1P53384 320 aa5.31□□□□□ -1.56
SPTAN1-232ENST00000636483 DCAF8Q5TAQ9 597 aa5.31□□□□□ -1.56
SPTAN1-232ENST00000636483 SPDYE1Q8NFV5 336 aaPredicted RBP5.31□□□□□ -1.56
SPTAN1-232ENST00000636483 CREBZFQ9NS37 354 aa5.31□□□□□ -1.56
SPTAN1-232ENST00000636483 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.3□□□□□ -1.56
SPTAN1-232ENST00000636483 RBM42Q9BTD8 480 aaKnown RBP5.29□□□□□ -1.56
SPTAN1-232ENST00000636483 KDM2AQ9Y2K7 1162 aa5.29□□□□□ -1.56
SPTAN1-232ENST00000636483 MNX1P50219 401 aaPredicted RBP5.28□□□□□ -1.56
SPTAN1-232ENST00000636483 SPRYD3Q8NCJ5 442 aa5.27□□□□□ -1.57
SPTAN1-232ENST00000636483 RNF25Q96BH1 459 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms