RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 ZNF536O15090 1300 aa19.59■□□□□ 0.73
UBE3D-208ENST00000626828 TFRCP02786 760 aaKnown RBP19.59■□□□□ 0.73
UBE3D-208ENST00000626828 CCDC174Q6PII3 467 aa19.59■□□□□ 0.73
UBE3D-208ENST00000626828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.59■□□□□ 0.73
UBE3D-208ENST00000626828 AGBL1Q96MI9 1066 aa19.59■□□□□ 0.73
UBE3D-208ENST00000626828 DEFB118Q96PH6 123 aa19.59■□□□□ 0.73
UBE3D-208ENST00000626828 RANBP17Q9H2T7 1088 aaKnown RBP19.59■□□□□ 0.73
UBE3D-208ENST00000626828 FLRT1Q9NZU1 646 aa19.59■□□□□ 0.73
UBE3D-208ENST00000626828 PDE4DIPQ5VU43 2346 aa19.59■□□□□ 0.73
UBE3D-208ENST00000626828 RBBP6Q7Z6E9 1792 aaKnown RBP19.59■□□□□ 0.73
UBE3D-208ENST00000626828 IGHA2P01877 340 aa19.58■□□□□ 0.72
UBE3D-208ENST00000626828 PARP1P09874 1014 aaKnown RBP19.58■□□□□ 0.72
UBE3D-208ENST00000626828 SNAP25P60880 206 aa19.58■□□□□ 0.72
UBE3D-208ENST00000626828 WTAPQ15007 396 aa19.58■□□□□ 0.72
UBE3D-208ENST00000626828 ZNF792Q3KQV3 632 aa19.58■□□□□ 0.72
UBE3D-208ENST00000626828 ASPRV1Q53RT3 343 aa19.58■□□□□ 0.72
UBE3D-208ENST00000626828 MB21D2Q8IYB1 491 aaPredicted RBP19.58■□□□□ 0.72
UBE3D-208ENST00000626828 ANKRD35Q8N283 1001 aa19.58■□□□□ 0.72
UBE3D-208ENST00000626828 TRERF1Q96PN7 1200 aa19.58■□□□□ 0.72
UBE3D-208ENST00000626828 ICAM1P05362 532 aa19.57■□□□□ 0.72
UBE3D-208ENST00000626828 PGK2P07205 417 aa19.57■□□□□ 0.72
UBE3D-208ENST00000626828 GOLGA8HP0CJ92 632 aa19.57■□□□□ 0.72
UBE3D-208ENST00000626828 ALAS1P13196 640 aa19.57■□□□□ 0.72
UBE3D-208ENST00000626828 MCM5P33992 734 aa19.57■□□□□ 0.72
UBE3D-208ENST00000626828 CHST3Q7LGC8 479 aa19.57■□□□□ 0.72
UBE3D-208ENST00000626828 TMTC2Q8N394 836 aa19.57■□□□□ 0.72
UBE3D-208ENST00000626828 IGDCC4Q8TDY8 1250 aa19.57■□□□□ 0.72
UBE3D-208ENST00000626828 MAML3Q96JK9 1138 aa19.57■□□□□ 0.72
UBE3D-208ENST00000626828 UBA5Q9GZZ9 404 aa19.57■□□□□ 0.72
UBE3D-208ENST00000626828 ACAD9Q9H845 621 aa19.57■□□□□ 0.72
UBE3D-208ENST00000626828 SMCHD1A6NHR9 2005 aa19.57■□□□□ 0.72
UBE3D-208ENST00000626828 CYP2C19P33261 490 aa19.56■□□□□ 0.72
UBE3D-208ENST00000626828 TSGA10IPQ3SY00 556 aa19.56■□□□□ 0.72
UBE3D-208ENST00000626828 TMEM67Q5HYA8 995 aa19.56■□□□□ 0.72
UBE3D-208ENST00000626828 CRISPLD2Q9H0B8 497 aa19.56■□□□□ 0.72
UBE3D-208ENST00000626828 HOMER2Q9NSB8 354 aa19.56■□□□□ 0.72
UBE3D-208ENST00000626828 RNF146Q9NTX7 359 aa19.56■□□□□ 0.72
UBE3D-208ENST00000626828 CCPG1Q9ULG6 757 aa19.56■□□□□ 0.72
UBE3D-208ENST00000626828 DNAJC25-GNG10A0A024R161 153 aa19.55■□□□□ 0.72
UBE3D-208ENST00000626828 REC8O95072 547 aa19.55■□□□□ 0.72
UBE3D-208ENST00000626828 ANTXR2P58335 489 aa19.55■□□□□ 0.72
UBE3D-208ENST00000626828 MSL3Q8N5Y2 521 aaKnown RBP19.55■□□□□ 0.72
UBE3D-208ENST00000626828 TMEM87BQ96K49 555 aa19.55■□□□□ 0.72
UBE3D-208ENST00000626828 ZNF236Q9UL36 1845 aa19.55■□□□□ 0.72
UBE3D-208ENST00000626828 PRC1O43663 620 aa19.54■□□□□ 0.72
UBE3D-208ENST00000626828 CCND3P30281 292 aaPredicted RBP19.54■□□□□ 0.72
UBE3D-208ENST00000626828 KRT32Q14532 448 aa19.54■□□□□ 0.72
UBE3D-208ENST00000626828 CATIPQ7Z7H3 387 aa19.54■□□□□ 0.72
UBE3D-208ENST00000626828 ADGRF4Q8IZF3 695 aa19.54■□□□□ 0.72
UBE3D-208ENST00000626828 SHISA4Q96DD7 197 aa19.54■□□□□ 0.72
UBE3D-208ENST00000626828 TINF2Q9BSI4 451 aa19.54■□□□□ 0.72
UBE3D-208ENST00000626828 KLRF2D3W0D1 207 aa19.53■□□□□ 0.72
UBE3D-208ENST00000626828 MSCO60682 206 aa19.53■□□□□ 0.72
UBE3D-208ENST00000626828 CNGA1P29973 690 aa19.53■□□□□ 0.72
UBE3D-208ENST00000626828 ZNF467Q7Z7K2 595 aaPredicted RBP19.53■□□□□ 0.72
UBE3D-208ENST00000626828 NEK1Q96PY6 1258 aa19.53■□□□□ 0.72
UBE3D-208ENST00000626828 VAT1LQ9HCJ6 419 aa19.53■□□□□ 0.72
UBE3D-208ENST00000626828 NRBP1Q9UHY1 535 aa19.53■□□□□ 0.72
UBE3D-208ENST00000626828 WDR19Q8NEZ3 1342 aa19.52■□□□□ 0.72
UBE3D-208ENST00000626828 PLXNA1Q9UIW2 1896 aa19.52■□□□□ 0.72
UBE3D-208ENST00000626828 PALM3A6NDB9 673 aaPredicted RBP19.52■□□□□ 0.72
UBE3D-208ENST00000626828 POTEB2H3BUK9 544 aa19.52■□□□□ 0.72
UBE3D-208ENST00000626828 EPB41L2O43491 1005 aaKnown RBP19.52■□□□□ 0.72
UBE3D-208ENST00000626828 LIFRP42702 1097 aa19.52■□□□□ 0.72
UBE3D-208ENST00000626828 TROAPQ12815 778 aa19.52■□□□□ 0.72
UBE3D-208ENST00000626828 STAG2Q8N3U4 1231 aa19.52■□□□□ 0.72
UBE3D-208ENST00000626828 ANKLE1Q8NAG6 615 aa19.52■□□□□ 0.72
UBE3D-208ENST00000626828 MAP3K14Q99558 947 aa19.52■□□□□ 0.72
UBE3D-208ENST00000626828 CPVLQ9H3G5 476 aa19.52■□□□□ 0.72
UBE3D-208ENST00000626828 SENP2Q9HC62 589 aa19.52■□□□□ 0.72
UBE3D-208ENST00000626828 A1CFQ9NQ94 594 aaKnown RBP19.52■□□□□ 0.72
UBE3D-208ENST00000626828 MAD2L2Q9UI95 211 aa19.52■□□□□ 0.72
UBE3D-208ENST00000626828 OGDHLQ9ULD0 1010 aa19.52■□□□□ 0.72
UBE3D-208ENST00000626828 BAZ2BQ9UIF8 2168 aaKnown RBP19.51■□□□□ 0.71
UBE3D-208ENST00000626828 PFASO15067 1338 aa19.51■□□□□ 0.71
UBE3D-208ENST00000626828 DHX16O60231 1041 aaKnown RBP19.51■□□□□ 0.71
UBE3D-208ENST00000626828 CYBAP13498 195 aa19.51■□□□□ 0.71
UBE3D-208ENST00000626828 GRM4Q14833 912 aa19.51■□□□□ 0.71
UBE3D-208ENST00000626828 MUM1L1Q5H9M0 696 aa19.51■□□□□ 0.71
UBE3D-208ENST00000626828 PRAMEF19Q5SWL8 479 aa19.51■□□□□ 0.71
UBE3D-208ENST00000626828 LHX8Q68G74 356 aa19.51■□□□□ 0.71
UBE3D-208ENST00000626828 MAMDC4Q6UXC1 1216 aa19.51■□□□□ 0.71
UBE3D-208ENST00000626828 RASEFQ8IZ41 740 aa19.51■□□□□ 0.71
UBE3D-208ENST00000626828 TRPV1Q8NER1 839 aa19.51■□□□□ 0.71
UBE3D-208ENST00000626828 KCNB2Q92953 911 aa19.51■□□□□ 0.71
UBE3D-208ENST00000626828 LY9Q9HBG7 655 aa19.51■□□□□ 0.71
UBE3D-208ENST00000626828 HMGB1P09429 215 aaKnown RBP19.5■□□□□ 0.71
UBE3D-208ENST00000626828 HSPA4P34932 840 aa19.5■□□□□ 0.71
UBE3D-208ENST00000626828 NSMFQ6X4W1 530 aa19.5■□□□□ 0.71
UBE3D-208ENST00000626828 NFXL1Q6ZNB6 911 aa19.5■□□□□ 0.71
UBE3D-208ENST00000626828 DHX32Q7L7V1 743 aaKnown RBP19.5■□□□□ 0.71
UBE3D-208ENST00000626828 FAM133AQ8N9E0 248 aa19.5■□□□□ 0.71
UBE3D-208ENST00000626828 MAF1Q9H063 256 aa19.5■□□□□ 0.71
UBE3D-208ENST00000626828 JMJD4Q9H9V9 463 aa19.5■□□□□ 0.71
UBE3D-208ENST00000626828 CYP39A1Q9NYL5 469 aa19.5■□□□□ 0.71
UBE3D-208ENST00000626828 DDX20Q9UHI6 824 aaKnown RBP19.5■□□□□ 0.71
UBE3D-208ENST00000626828 CNPY2Q9Y2B0 182 aa19.5■□□□□ 0.71
UBE3D-208ENST00000626828 SYNGAP1Q96PV0 1343 aa19.5■□□□□ 0.71
UBE3D-208ENST00000626828 CCDC69A6NI79 296 aa19.49■□□□□ 0.71
UBE3D-208ENST00000626828 SH2B2O14492 632 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms