RNA–Protein interactions for RNA: ENST00000624071.1

LINC01006-208, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

Gene LINC01006, Length 651 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-208ENST00000624071 MAP3K21Q5TCX8 1036 aa22.28■■□□□ 1.16
LINC01006-208ENST00000624071 SHISA4Q96DD7 197 aa22.28■■□□□ 1.16
LINC01006-208ENST00000624071 DDX11Q96FC9 970 aa22.28■■□□□ 1.16
LINC01006-208ENST00000624071 RANBP17Q9H2T7 1088 aaKnown RBP22.28■■□□□ 1.16
LINC01006-208ENST00000624071 GPHNQ9NQX3 736 aaPredicted RBP22.28■■□□□ 1.16
LINC01006-208ENST00000624071 RNF146Q9NTX7 359 aa22.28■■□□□ 1.16
LINC01006-208ENST00000624071 SLC5A4Q9NY91 659 aa22.28■■□□□ 1.16
LINC01006-208ENST00000624071 CCPG1Q9ULG6 757 aa22.28■■□□□ 1.16
LINC01006-208ENST00000624071 PRC1O43663 620 aa22.27■■□□□ 1.16
LINC01006-208ENST00000624071 CCND3P30281 292 aaPredicted RBP22.27■■□□□ 1.16
LINC01006-208ENST00000624071 GJA8P48165 433 aa22.27■■□□□ 1.16
LINC01006-208ENST00000624071 SART3Q15020 963 aaKnown RBP22.27■■□□□ 1.16
LINC01006-208ENST00000624071 GPATCH4Q5T3I0 446 aaKnown RBP22.27■■□□□ 1.16
LINC01006-208ENST00000624071 RNF20Q5VTR2 975 aa22.27■■□□□ 1.16
LINC01006-208ENST00000624071 CHST13Q8NET6 341 aa22.27■■□□□ 1.16
LINC01006-208ENST00000624071 PAK6Q9NQU5 681 aaPredicted RBP22.27■■□□□ 1.16
LINC01006-208ENST00000624071 CENPFP49454 3210 aa22.27■■□□□ 1.15
LINC01006-208ENST00000624071 COL11A1P12107 1806 aaPredicted RBP22.27■■□□□ 1.15
LINC01006-208ENST00000624071 SGPL1O95470 568 aa22.26■■□□□ 1.15
LINC01006-208ENST00000624071 PARP1P09874 1014 aaKnown RBP22.26■■□□□ 1.15
LINC01006-208ENST00000624071 ZNF792Q3KQV3 632 aa22.26■■□□□ 1.15
LINC01006-208ENST00000624071 ANKRD35Q8N283 1001 aa22.26■■□□□ 1.15
LINC01006-208ENST00000624071 MAML3Q96JK9 1138 aa22.26■■□□□ 1.15
LINC01006-208ENST00000624071 TRERF1Q96PN7 1200 aa22.26■■□□□ 1.15
LINC01006-208ENST00000624071 FBXO40Q9UH90 709 aa22.26■■□□□ 1.15
LINC01006-208ENST00000624071 TFRCP02786 760 aaKnown RBP22.25■■□□□ 1.15
LINC01006-208ENST00000624071 ICAM1P05362 532 aa22.25■■□□□ 1.15
LINC01006-208ENST00000624071 ASPRV1Q53RT3 343 aa22.25■■□□□ 1.15
LINC01006-208ENST00000624071 MUM1L1Q5H9M0 696 aa22.25■■□□□ 1.15
LINC01006-208ENST00000624071 OLFML2BQ68BL8 750 aa22.25■■□□□ 1.15
LINC01006-208ENST00000624071 RASEFQ8IZ41 740 aa22.25■■□□□ 1.15
LINC01006-208ENST00000624071 STAG2Q8N3U4 1231 aa22.25■■□□□ 1.15
LINC01006-208ENST00000624071 IGDCC4Q8TDY8 1250 aa22.25■■□□□ 1.15
LINC01006-208ENST00000624071 ACAD9Q9H845 621 aa22.25■■□□□ 1.15
LINC01006-208ENST00000624071 VAT1LQ9HCJ6 419 aa22.25■■□□□ 1.15
LINC01006-208ENST00000624071 DHX16O60231 1041 aaKnown RBP22.24■■□□□ 1.15
LINC01006-208ENST00000624071 CNGA1P29973 690 aa22.24■■□□□ 1.15
LINC01006-208ENST00000624071 MCM5P33992 734 aa22.24■■□□□ 1.15
LINC01006-208ENST00000624071 TKFCQ3LXA3 575 aa22.24■■□□□ 1.15
LINC01006-208ENST00000624071 PRAMEF19Q5SWL8 479 aa22.24■■□□□ 1.15
LINC01006-208ENST00000624071 LRRC2Q9BYS8 371 aa22.24■■□□□ 1.15
LINC01006-208ENST00000624071 KIAA0100Q14667 2235 aaKnown RBP22.24■■□□□ 1.15
LINC01006-208ENST00000624071 IGHA2P01877 340 aa22.23■■□□□ 1.15
LINC01006-208ENST00000624071 ADGRF4Q8IZF3 695 aa22.23■■□□□ 1.15
LINC01006-208ENST00000624071 TRPV1Q8NER1 839 aa22.23■■□□□ 1.15
LINC01006-208ENST00000624071 DNAJC25-GNG10A0A024R161 153 aa22.22■■□□□ 1.15
LINC01006-208ENST00000624071 NEK1Q96PY6 1258 aa22.22■■□□□ 1.15
LINC01006-208ENST00000624071 MYL10Q9BUA6 226 aa22.22■■□□□ 1.15
LINC01006-208ENST00000624071 LY9Q9HBG7 655 aa22.22■■□□□ 1.15
LINC01006-208ENST00000624071 A1CFQ9NQ94 594 aaKnown RBP22.22■■□□□ 1.15
LINC01006-208ENST00000624071 DIS3Q9Y2L1 958 aaKnown RBP22.22■■□□□ 1.15
LINC01006-208ENST00000624071 KLRF2D3W0D1 207 aa22.21■■□□□ 1.15
LINC01006-208ENST00000624071 SH2B2O14492 632 aaPredicted RBP22.21■■□□□ 1.15
LINC01006-208ENST00000624071 CNTN2Q02246 1040 aa22.21■■□□□ 1.15
LINC01006-208ENST00000624071 CDC37Q16543 378 aaPredicted RBP22.21■■□□□ 1.15
LINC01006-208ENST00000624071 ADCK5Q3MIX3 580 aa22.21■■□□□ 1.15
LINC01006-208ENST00000624071 NSMFQ6X4W1 530 aa22.21■■□□□ 1.15
LINC01006-208ENST00000624071 NFXL1Q6ZNB6 911 aa22.21■■□□□ 1.15
LINC01006-208ENST00000624071 CATIPQ7Z7H3 387 aa22.21■■□□□ 1.15
LINC01006-208ENST00000624071 NUP133Q8WUM0 1156 aa22.21■■□□□ 1.15
LINC01006-208ENST00000624071 TCEANC2Q96MN5 208 aa22.21■■□□□ 1.15
LINC01006-208ENST00000624071 TINF2Q9BSI4 451 aa22.21■■□□□ 1.15
LINC01006-208ENST00000624071 CRISPLD2Q9H0B8 497 aa22.21■■□□□ 1.15
LINC01006-208ENST00000624071 MAD2L2Q9UI95 211 aa22.21■■□□□ 1.15
LINC01006-208ENST00000624071 ZNF236Q9UL36 1845 aa22.21■■□□□ 1.15
LINC01006-208ENST00000624071 POTEB2H3BUK9 544 aa22.2■■□□□ 1.14
LINC01006-208ENST00000624071 REC8O95072 547 aa22.2■■□□□ 1.14
LINC01006-208ENST00000624071 CYBAP13498 195 aa22.2■■□□□ 1.14
LINC01006-208ENST00000624071 TROAPQ12815 778 aa22.2■■□□□ 1.14
LINC01006-208ENST00000624071 GRM4Q14833 912 aa22.2■■□□□ 1.14
LINC01006-208ENST00000624071 USH1GQ495M9 461 aa22.2■■□□□ 1.14
LINC01006-208ENST00000624071 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.2■■□□□ 1.14
LINC01006-208ENST00000624071 TMEM87BQ96K49 555 aa22.2■■□□□ 1.14
LINC01006-208ENST00000624071 JMJD4Q9H9V9 463 aa22.2■■□□□ 1.14
LINC01006-208ENST00000624071 PALM3A6NDB9 673 aaPredicted RBP22.19■■□□□ 1.14
LINC01006-208ENST00000624071 NFIBO00712 420 aa22.19■■□□□ 1.14
LINC01006-208ENST00000624071 FARP2O94887 1054 aaPredicted RBP22.19■■□□□ 1.14
LINC01006-208ENST00000624071 ANO1Q5XXA6 986 aa22.19■■□□□ 1.14
LINC01006-208ENST00000624071 RAB11FIP4Q86YS3 637 aa22.19■■□□□ 1.14
LINC01006-208ENST00000624071 ZNF654Q8IZM8 581 aa22.19■■□□□ 1.14
LINC01006-208ENST00000624071 FGD4Q96M96 766 aa22.19■■□□□ 1.14
LINC01006-208ENST00000624071 WDR19Q8NEZ3 1342 aa22.18■■□□□ 1.14
LINC01006-208ENST00000624071 CCDC69A6NI79 296 aa22.18■■□□□ 1.14
LINC01006-208ENST00000624071 HSPA4P34932 840 aa22.18■■□□□ 1.14
LINC01006-208ENST00000624071 QRICH1Q2TAL8 776 aa22.18■■□□□ 1.14
LINC01006-208ENST00000624071 TSGA10IPQ3SY00 556 aa22.18■■□□□ 1.14
LINC01006-208ENST00000624071 LHX8Q68G74 356 aa22.18■■□□□ 1.14
LINC01006-208ENST00000624071 CLEC4DQ8WXI8 215 aa22.18■■□□□ 1.14
LINC01006-208ENST00000624071 PURBQ96QR8 312 aaKnown RBP22.18■■□□□ 1.14
LINC01006-208ENST00000624071 MTA3Q9BTC8 594 aa22.18■■□□□ 1.14
LINC01006-208ENST00000624071 CYP39A1Q9NYL5 469 aa22.18■■□□□ 1.14
LINC01006-208ENST00000624071 DDX20Q9UHI6 824 aaKnown RBP22.18■■□□□ 1.14
LINC01006-208ENST00000624071 PFASO15067 1338 aa22.17■■□□□ 1.14
LINC01006-208ENST00000624071 SOWAHBA6NEL2 793 aa22.17■■□□□ 1.14
LINC01006-208ENST00000624071 CPA1P15085 419 aa22.17■■□□□ 1.14
LINC01006-208ENST00000624071 BAATQ14032 418 aaPredicted RBP22.17■■□□□ 1.14
LINC01006-208ENST00000624071 KRT32Q14532 448 aa22.17■■□□□ 1.14
LINC01006-208ENST00000624071 SLC35G1Q2M3R5 365 aa22.17■■□□□ 1.14
LINC01006-208ENST00000624071 FAM133AQ8N9E0 248 aa22.17■■□□□ 1.14
LINC01006-208ENST00000624071 SNX14Q9Y5W7 946 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms