RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 CHST13Q8NET6 341 aa16.34■□□□□ 0.21
PCDHGC3-208ENST00000622836 FLRT1Q9NZU1 646 aa16.34■□□□□ 0.21
PCDHGC3-208ENST00000622836 CCPG1Q9ULG6 757 aa16.34■□□□□ 0.21
PCDHGC3-208ENST00000622836 PRC1O43663 620 aa16.33■□□□□ 0.2
PCDHGC3-208ENST00000622836 REC8O95072 547 aa16.33■□□□□ 0.2
PCDHGC3-208ENST00000622836 TFRCP02786 760 aaKnown RBP16.33■□□□□ 0.2
PCDHGC3-208ENST00000622836 MCM5P33992 734 aa16.33■□□□□ 0.2
PCDHGC3-208ENST00000622836 GJA8P48165 433 aa16.33■□□□□ 0.2
PCDHGC3-208ENST00000622836 CACNB2Q08289 660 aaPredicted RBP16.33■□□□□ 0.2
PCDHGC3-208ENST00000622836 TKFCQ3LXA3 575 aa16.33■□□□□ 0.2
PCDHGC3-208ENST00000622836 ASPRV1Q53RT3 343 aa16.33■□□□□ 0.2
PCDHGC3-208ENST00000622836 MB21D2Q8IYB1 491 aaPredicted RBP16.33■□□□□ 0.2
PCDHGC3-208ENST00000622836 U2AF1L4Q8WU68 220 aaKnown RBP16.33■□□□□ 0.2
PCDHGC3-208ENST00000622836 TRERF1Q96PN7 1200 aa16.33■□□□□ 0.2
PCDHGC3-208ENST00000622836 UBA5Q9GZZ9 404 aa16.33■□□□□ 0.2
PCDHGC3-208ENST00000622836 RANBP17Q9H2T7 1088 aaKnown RBP16.33■□□□□ 0.2
PCDHGC3-208ENST00000622836 ACAD9Q9H845 621 aa16.33■□□□□ 0.2
PCDHGC3-208ENST00000622836 RNF146Q9NTX7 359 aa16.33■□□□□ 0.2
PCDHGC3-208ENST00000622836 RBBP6Q7Z6E9 1792 aaKnown RBP16.33■□□□□ 0.2
PCDHGC3-208ENST00000622836 ZNF236Q9UL36 1845 aa16.33■□□□□ 0.2
PCDHGC3-208ENST00000622836 ZNF536O15090 1300 aa16.32■□□□□ 0.2
PCDHGC3-208ENST00000622836 ICAM1P05362 532 aa16.32■□□□□ 0.2
PCDHGC3-208ENST00000622836 CNGA1P29973 690 aa16.32■□□□□ 0.2
PCDHGC3-208ENST00000622836 CYP2C19P33261 490 aa16.32■□□□□ 0.2
PCDHGC3-208ENST00000622836 MAP3K21Q5TCX8 1036 aa16.32■□□□□ 0.2
PCDHGC3-208ENST00000622836 OLFML2BQ68BL8 750 aa16.32■□□□□ 0.2
PCDHGC3-208ENST00000622836 NFXL1Q6ZNB6 911 aa16.32■□□□□ 0.2
PCDHGC3-208ENST00000622836 MAML3Q96JK9 1138 aa16.32■□□□□ 0.2
PCDHGC3-208ENST00000622836 PAK6Q9NQU5 681 aaPredicted RBP16.32■□□□□ 0.2
PCDHGC3-208ENST00000622836 SGPL1O95470 568 aa16.31■□□□□ 0.2
PCDHGC3-208ENST00000622836 ANTXR2P58335 489 aa16.31■□□□□ 0.2
PCDHGC3-208ENST00000622836 CATIPQ7Z7H3 387 aa16.31■□□□□ 0.2
PCDHGC3-208ENST00000622836 CPVLQ9H3G5 476 aa16.31■□□□□ 0.2
PCDHGC3-208ENST00000622836 PNMA2Q9UL42 364 aa16.31■□□□□ 0.2
PCDHGC3-208ENST00000622836 ZNFX1Q9P2E3 1918 aaKnown RBP16.3■□□□□ 0.2
PCDHGC3-208ENST00000622836 CCND3P30281 292 aaPredicted RBP16.3■□□□□ 0.2
PCDHGC3-208ENST00000622836 KRT32Q14532 448 aa16.3■□□□□ 0.2
PCDHGC3-208ENST00000622836 ZNF792Q3KQV3 632 aa16.3■□□□□ 0.2
PCDHGC3-208ENST00000622836 NSMFQ6X4W1 530 aa16.3■□□□□ 0.2
PCDHGC3-208ENST00000622836 IGDCC4Q8TDY8 1250 aa16.3■□□□□ 0.2
PCDHGC3-208ENST00000622836 NUP133Q8WUM0 1156 aa16.3■□□□□ 0.2
PCDHGC3-208ENST00000622836 TMEM87BQ96K49 555 aa16.3■□□□□ 0.2
PCDHGC3-208ENST00000622836 NEK1Q96PY6 1258 aa16.3■□□□□ 0.2
PCDHGC3-208ENST00000622836 SENP2Q9HC62 589 aa16.3■□□□□ 0.2
PCDHGC3-208ENST00000622836 VAT1LQ9HCJ6 419 aa16.3■□□□□ 0.2
PCDHGC3-208ENST00000622836 DIS3Q9Y2L1 958 aaKnown RBP16.3■□□□□ 0.2
PCDHGC3-208ENST00000622836 PFASO15067 1338 aa16.29■□□□□ 0.2
PCDHGC3-208ENST00000622836 CCDC69A6NI79 296 aa16.29■□□□□ 0.2
PCDHGC3-208ENST00000622836 KLRF2D3W0D1 207 aa16.29■□□□□ 0.2
PCDHGC3-208ENST00000622836 TAL1P17542 331 aaPredicted RBP16.29■□□□□ 0.2
PCDHGC3-208ENST00000622836 CDC37Q16543 378 aaPredicted RBP16.29■□□□□ 0.2
PCDHGC3-208ENST00000622836 USH1GQ495M9 461 aa16.29■□□□□ 0.2
PCDHGC3-208ENST00000622836 ADGRF4Q8IZF3 695 aa16.29■□□□□ 0.2
PCDHGC3-208ENST00000622836 SHISA4Q96DD7 197 aa16.29■□□□□ 0.2
PCDHGC3-208ENST00000622836 A1CFQ9NQ94 594 aaKnown RBP16.29■□□□□ 0.2
PCDHGC3-208ENST00000622836 BRCA2P51587 3418 aa16.28■□□□□ 0.2
PCDHGC3-208ENST00000622836 POTEB2H3BUK9 544 aa16.28■□□□□ 0.2
PCDHGC3-208ENST00000622836 GRM4Q14833 912 aa16.28■□□□□ 0.2
PCDHGC3-208ENST00000622836 MUM1L1Q5H9M0 696 aa16.28■□□□□ 0.2
PCDHGC3-208ENST00000622836 TMTC2Q8N394 836 aa16.28■□□□□ 0.2
PCDHGC3-208ENST00000622836 STAG2Q8N3U4 1231 aa16.28■□□□□ 0.2
PCDHGC3-208ENST00000622836 TINF2Q9BSI4 451 aa16.28■□□□□ 0.2
PCDHGC3-208ENST00000622836 MTA3Q9BTC8 594 aa16.28■□□□□ 0.2
PCDHGC3-208ENST00000622836 LY9Q9HBG7 655 aa16.28■□□□□ 0.2
PCDHGC3-208ENST00000622836 WDR19Q8NEZ3 1342 aa16.27■□□□□ 0.2
PCDHGC3-208ENST00000622836 DNAJC25-GNG10A0A024R161 153 aa16.27■□□□□ 0.2
PCDHGC3-208ENST00000622836 PTPDC1A2A3K4 754 aa16.27■□□□□ 0.2
PCDHGC3-208ENST00000622836 SH2B2O14492 632 aaPredicted RBP16.27■□□□□ 0.2
PCDHGC3-208ENST00000622836 MSCO60682 206 aa16.27■□□□□ 0.2
PCDHGC3-208ENST00000622836 FARP2O94887 1054 aaPredicted RBP16.27■□□□□ 0.2
PCDHGC3-208ENST00000622836 CYBAP13498 195 aa16.27■□□□□ 0.2
PCDHGC3-208ENST00000622836 CAPN2P17655 700 aa16.27■□□□□ 0.2
PCDHGC3-208ENST00000622836 PRAMEF19Q5SWL8 479 aa16.27■□□□□ 0.2
PCDHGC3-208ENST00000622836 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.27■□□□□ 0.2
PCDHGC3-208ENST00000622836 RASEFQ8IZ41 740 aa16.27■□□□□ 0.2
PCDHGC3-208ENST00000622836 ZNF654Q8IZM8 581 aa16.27■□□□□ 0.2
PCDHGC3-208ENST00000622836 CTCFLQ8NI51 663 aaPredicted RBP16.27■□□□□ 0.2
PCDHGC3-208ENST00000622836 LRRC2Q9BYS8 371 aa16.27■□□□□ 0.2
PCDHGC3-208ENST00000622836 GPHNQ9NQX3 736 aaPredicted RBP16.27■□□□□ 0.2
PCDHGC3-208ENST00000622836 MAD2L2Q9UI95 211 aa16.27■□□□□ 0.2
PCDHGC3-208ENST00000622836 CNPY2Q9Y2B0 182 aa16.27■□□□□ 0.2
PCDHGC3-208ENST00000622836 PLXNA1Q9UIW2 1896 aa16.27■□□□□ 0.19
PCDHGC3-208ENST00000622836 DDAH1O94760 285 aa16.26■□□□□ 0.19
PCDHGC3-208ENST00000622836 HMGB1P09429 215 aaKnown RBP16.26■□□□□ 0.19
PCDHGC3-208ENST00000622836 KIF5BP33176 963 aa16.26■□□□□ 0.19
PCDHGC3-208ENST00000622836 HSPA4P34932 840 aa16.26■□□□□ 0.19
PCDHGC3-208ENST00000622836 FGD1P98174 961 aa16.26■□□□□ 0.19
PCDHGC3-208ENST00000622836 ADCK5Q3MIX3 580 aa16.26■□□□□ 0.19
PCDHGC3-208ENST00000622836 TSGA10IPQ3SY00 556 aa16.26■□□□□ 0.19
PCDHGC3-208ENST00000622836 DHX32Q7L7V1 743 aaKnown RBP16.26■□□□□ 0.19
PCDHGC3-208ENST00000622836 MYL10Q9BUA6 226 aa16.26■□□□□ 0.19
PCDHGC3-208ENST00000622836 CRISPLD2Q9H0B8 497 aa16.26■□□□□ 0.19
PCDHGC3-208ENST00000622836 JMJD4Q9H9V9 463 aa16.26■□□□□ 0.19
PCDHGC3-208ENST00000622836 CYP39A1Q9NYL5 469 aa16.26■□□□□ 0.19
PCDHGC3-208ENST00000622836 DDX20Q9UHI6 824 aaKnown RBP16.26■□□□□ 0.19
PCDHGC3-208ENST00000622836 SLC12A7Q9Y666 1083 aa16.26■□□□□ 0.19
PCDHGC3-208ENST00000622836 PALM3A6NDB9 673 aaPredicted RBP16.25■□□□□ 0.19
PCDHGC3-208ENST00000622836 NFIBO00712 420 aa16.25■□□□□ 0.19
PCDHGC3-208ENST00000622836 CNTN2Q02246 1040 aa16.25■□□□□ 0.19
PCDHGC3-208ENST00000622836 TROAPQ12815 778 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms