RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 FDX1P10109 184 aa19.58■□□□□ 0.73
CBWD3-211ENST00000615061 CYP2C19P33261 490 aa19.58■□□□□ 0.73
CBWD3-211ENST00000615061 CACNB2Q08289 660 aaPredicted RBP19.58■□□□□ 0.73
CBWD3-211ENST00000615061 KCTD2Q14681 263 aa19.58■□□□□ 0.73
CBWD3-211ENST00000615061 MAP3K21Q5TCX8 1036 aa19.58■□□□□ 0.73
CBWD3-211ENST00000615061 IGDCC4Q8TDY8 1250 aa19.58■□□□□ 0.73
CBWD3-211ENST00000615061 SHISA4Q96DD7 197 aa19.58■□□□□ 0.73
CBWD3-211ENST00000615061 MCM3APO60318 1980 aa19.58■□□□□ 0.72
CBWD3-211ENST00000615061 COPB2P35606 906 aa19.57■□□□□ 0.72
CBWD3-211ENST00000615061 TMEM67Q5HYA8 995 aa19.57■□□□□ 0.72
CBWD3-211ENST00000615061 GPATCH4Q5T3I0 446 aaKnown RBP19.57■□□□□ 0.72
CBWD3-211ENST00000615061 STAG2Q8N3U4 1231 aa19.57■□□□□ 0.72
CBWD3-211ENST00000615061 DEFB118Q96PH6 123 aa19.57■□□□□ 0.72
CBWD3-211ENST00000615061 DNAH12Q6ZR08 3092 aa19.57■□□□□ 0.72
CBWD3-211ENST00000615061 ERICH2A1L162 156 aa19.57■□□□□ 0.72
CBWD3-211ENST00000615061 PRC1O43663 620 aa19.57■□□□□ 0.72
CBWD3-211ENST00000615061 GJB1P08034 283 aa19.57■□□□□ 0.72
CBWD3-211ENST00000615061 ALAS1P13196 640 aa19.57■□□□□ 0.72
CBWD3-211ENST00000615061 WTAPQ15007 396 aa19.57■□□□□ 0.72
CBWD3-211ENST00000615061 ADCK5Q3MIX3 580 aa19.57■□□□□ 0.72
CBWD3-211ENST00000615061 TRMT44Q8IYL2 757 aaKnown RBP19.57■□□□□ 0.72
CBWD3-211ENST00000615061 LRRC2Q9BYS8 371 aa19.57■□□□□ 0.72
CBWD3-211ENST00000615061 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.57■□□□□ 0.72
CBWD3-211ENST00000615061 PAK6Q9NQU5 681 aaPredicted RBP19.57■□□□□ 0.72
CBWD3-211ENST00000615061 RPTORQ8N122 1335 aa19.56■□□□□ 0.72
CBWD3-211ENST00000615061 IGHA2P01877 340 aa19.56■□□□□ 0.72
CBWD3-211ENST00000615061 PARP1P09874 1014 aaKnown RBP19.56■□□□□ 0.72
CBWD3-211ENST00000615061 CCND3P30281 292 aaPredicted RBP19.56■□□□□ 0.72
CBWD3-211ENST00000615061 SART3Q15020 963 aaKnown RBP19.56■□□□□ 0.72
CBWD3-211ENST00000615061 RNF20Q5VTR2 975 aa19.56■□□□□ 0.72
CBWD3-211ENST00000615061 U2AF1L4Q8WU68 220 aaKnown RBP19.56■□□□□ 0.72
CBWD3-211ENST00000615061 MAML3Q96JK9 1138 aa19.56■□□□□ 0.72
CBWD3-211ENST00000615061 RNF146Q9NTX7 359 aa19.56■□□□□ 0.72
CBWD3-211ENST00000615061 CCPG1Q9ULG6 757 aa19.56■□□□□ 0.72
CBWD3-211ENST00000615061 ICAM1P05362 532 aa19.55■□□□□ 0.72
CBWD3-211ENST00000615061 MCM5P33992 734 aa19.55■□□□□ 0.72
CBWD3-211ENST00000615061 GJA8P48165 433 aa19.55■□□□□ 0.72
CBWD3-211ENST00000615061 MUM1L1Q5H9M0 696 aa19.55■□□□□ 0.72
CBWD3-211ENST00000615061 CHST13Q8NET6 341 aa19.55■□□□□ 0.72
CBWD3-211ENST00000615061 TRERF1Q96PN7 1200 aa19.55■□□□□ 0.72
CBWD3-211ENST00000615061 LY9Q9HBG7 655 aa19.55■□□□□ 0.72
CBWD3-211ENST00000615061 HMX1Q9NP08 348 aaPredicted RBP19.55■□□□□ 0.72
CBWD3-211ENST00000615061 MLLT1Q03111 559 aaPredicted RBP19.55■□□□□ 0.72
CBWD3-211ENST00000615061 ZNF792Q3KQV3 632 aa19.55■□□□□ 0.72
CBWD3-211ENST00000615061 ASPRV1Q53RT3 343 aa19.55■□□□□ 0.72
CBWD3-211ENST00000615061 ANKRD35Q8N283 1001 aa19.55■□□□□ 0.72
CBWD3-211ENST00000615061 DDX11Q96FC9 970 aa19.55■□□□□ 0.72
CBWD3-211ENST00000615061 TCEANC2Q96MN5 208 aa19.55■□□□□ 0.72
CBWD3-211ENST00000615061 ACAD9Q9H845 621 aa19.55■□□□□ 0.72
CBWD3-211ENST00000615061 MAD2L2Q9UI95 211 aa19.55■□□□□ 0.72
CBWD3-211ENST00000615061 TROAPQ12815 778 aa19.54■□□□□ 0.72
CBWD3-211ENST00000615061 MFSD14CQ5VZR4 134 aa19.54■□□□□ 0.72
CBWD3-211ENST00000615061 OLFML2BQ68BL8 750 aa19.54■□□□□ 0.72
CBWD3-211ENST00000615061 ADGRF4Q8IZF3 695 aa19.54■□□□□ 0.72
CBWD3-211ENST00000615061 TRPV1Q8NER1 839 aa19.54■□□□□ 0.72
CBWD3-211ENST00000615061 MYL10Q9BUA6 226 aa19.54■□□□□ 0.72
CBWD3-211ENST00000615061 SLC5A4Q9NY91 659 aa19.54■□□□□ 0.72
CBWD3-211ENST00000615061 FBXO40Q9UH90 709 aa19.54■□□□□ 0.72
CBWD3-211ENST00000615061 LCTP09848 1927 aa19.53■□□□□ 0.72
CBWD3-211ENST00000615061 DNAJC25-GNG10A0A024R161 153 aa19.53■□□□□ 0.72
CBWD3-211ENST00000615061 SH2B2O14492 632 aaPredicted RBP19.53■□□□□ 0.72
CBWD3-211ENST00000615061 SGPL1O95470 568 aa19.53■□□□□ 0.72
CBWD3-211ENST00000615061 NEK1Q96PY6 1258 aa19.53■□□□□ 0.72
CBWD3-211ENST00000615061 VAT1LQ9HCJ6 419 aa19.53■□□□□ 0.72
CBWD3-211ENST00000615061 A1CFQ9NQ94 594 aaKnown RBP19.53■□□□□ 0.72
CBWD3-211ENST00000615061 HSPA4P34932 840 aa19.52■□□□□ 0.72
CBWD3-211ENST00000615061 SLC35G1Q2M3R5 365 aa19.52■□□□□ 0.72
CBWD3-211ENST00000615061 TSGA10IPQ3SY00 556 aa19.52■□□□□ 0.72
CBWD3-211ENST00000615061 PRAMEF19Q5SWL8 479 aa19.52■□□□□ 0.72
CBWD3-211ENST00000615061 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.52■□□□□ 0.72
CBWD3-211ENST00000615061 FGD4Q96M96 766 aa19.52■□□□□ 0.72
CBWD3-211ENST00000615061 PALM3A6NDB9 673 aaPredicted RBP19.52■□□□□ 0.71
CBWD3-211ENST00000615061 KLRF2D3W0D1 207 aa19.52■□□□□ 0.71
CBWD3-211ENST00000615061 DHX16O60231 1041 aaKnown RBP19.52■□□□□ 0.71
CBWD3-211ENST00000615061 REC8O95072 547 aa19.52■□□□□ 0.71
CBWD3-211ENST00000615061 CNTN2Q02246 1040 aa19.52■□□□□ 0.71
CBWD3-211ENST00000615061 GRM4Q14833 912 aa19.52■□□□□ 0.71
CBWD3-211ENST00000615061 CDC37Q16543 378 aaPredicted RBP19.52■□□□□ 0.71
CBWD3-211ENST00000615061 TKFCQ3LXA3 575 aa19.52■□□□□ 0.71
CBWD3-211ENST00000615061 NUP133Q8WUM0 1156 aa19.52■□□□□ 0.71
CBWD3-211ENST00000615061 JMJD4Q9H9V9 463 aa19.52■□□□□ 0.71
CBWD3-211ENST00000615061 FRMPD3Q5JV73 1810 aa19.52■□□□□ 0.71
CBWD3-211ENST00000615061 NFIBO00712 420 aa19.51■□□□□ 0.71
CBWD3-211ENST00000615061 CYBAP13498 195 aa19.51■□□□□ 0.71
CBWD3-211ENST00000615061 CPA1P15085 419 aa19.51■□□□□ 0.71
CBWD3-211ENST00000615061 USH1GQ495M9 461 aa19.51■□□□□ 0.71
CBWD3-211ENST00000615061 CATIPQ7Z7H3 387 aa19.51■□□□□ 0.71
CBWD3-211ENST00000615061 KCNB2Q92953 911 aa19.51■□□□□ 0.71
CBWD3-211ENST00000615061 TMEM87BQ96K49 555 aa19.51■□□□□ 0.71
CBWD3-211ENST00000615061 TINF2Q9BSI4 451 aa19.51■□□□□ 0.71
CBWD3-211ENST00000615061 DIS3Q9Y2L1 958 aaKnown RBP19.51■□□□□ 0.71
CBWD3-211ENST00000615061 SNX14Q9Y5W7 946 aa19.51■□□□□ 0.71
CBWD3-211ENST00000615061 TFRCP02786 760 aaKnown RBP19.5■□□□□ 0.71
CBWD3-211ENST00000615061 RXRAP19793 462 aa19.5■□□□□ 0.71
CBWD3-211ENST00000615061 CNGA1P29973 690 aa19.5■□□□□ 0.71
CBWD3-211ENST00000615061 NSMFQ6X4W1 530 aa19.5■□□□□ 0.71
CBWD3-211ENST00000615061 RAB11FIP4Q86YS3 637 aa19.5■□□□□ 0.71
CBWD3-211ENST00000615061 ZNF654Q8IZM8 581 aa19.5■□□□□ 0.71
CBWD3-211ENST00000615061 PURBQ96QR8 312 aaKnown RBP19.5■□□□□ 0.71
CBWD3-211ENST00000615061 CRISPLD2Q9H0B8 497 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms