RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 C2orf69Q8N8R5 385 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 SAMD15Q9P1V8 674 aa16.28■□□□□ 0.2
SNPH-203ENST00000614659 MKRN1Q9UHC7 482 aaKnown RBP16.28■□□□□ 0.2
SNPH-203ENST00000614659 H0YCG3 227 aa16.27■□□□□ 0.2
SNPH-203ENST00000614659 KIAA1524Q8TCG1 905 aa16.27■□□□□ 0.2
SNPH-203ENST00000614659 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.27■□□□□ 0.2
SNPH-203ENST00000614659 PTPRUQ92729 1446 aa16.27■□□□□ 0.2
SNPH-203ENST00000614659 TMEM110-MUSTN1A8MSY1 372 aa16.27■□□□□ 0.2
SNPH-203ENST00000614659 RPN1P04843 607 aaKnown RBP16.27■□□□□ 0.2
SNPH-203ENST00000614659 BCAMP50895 628 aa16.27■□□□□ 0.2
SNPH-203ENST00000614659 SCNN1DP51172 638 aa16.27■□□□□ 0.2
SNPH-203ENST00000614659 LIN9Q5TKA1 542 aa16.27■□□□□ 0.2
SNPH-203ENST00000614659 MAIP1Q8WWC4 291 aa16.27■□□□□ 0.2
SNPH-203ENST00000614659 SLF1Q9BQI6 1058 aa16.27■□□□□ 0.2
SNPH-203ENST00000614659 NEXMIFQ5QGS0 1516 aa16.27■□□□□ 0.2
SNPH-203ENST00000614659 IQCA1LA6NCM1 817 aa16.27■□□□□ 0.2
SNPH-203ENST00000614659 ARHGEF16Q5VV41 709 aa16.27■□□□□ 0.2
SNPH-203ENST00000614659 BARGINQ6ZT62 677 aa16.27■□□□□ 0.2
SNPH-203ENST00000614659 PNMA1Q8ND90 353 aa16.27■□□□□ 0.2
SNPH-203ENST00000614659 GOLGA5Q8TBA6 731 aa16.27■□□□□ 0.2
SNPH-203ENST00000614659 BLZF1Q9H2G9 400 aa16.27■□□□□ 0.2
SNPH-203ENST00000614659 COL15A1P39059 1388 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 USP42Q9H9J4 1324 aaKnown RBP16.27■□□□□ 0.19
SNPH-203ENST00000614659 POLR2MP0CAP2 368 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 EEF2P13639 858 aaKnown RBP16.27■□□□□ 0.19
SNPH-203ENST00000614659 IFNAR1P17181 557 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 ADORA1P30542 326 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 PHKA1P46020 1223 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 KLHL30Q0D2K2 578 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 TXNRD1Q16881 649 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 NCAPH2Q6IBW4 605 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 SARM1Q6SZW1 724 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 GBP6Q6ZN66 633 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 POTEDQ86YR6 584 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 CCDC50Q8IVM0 306 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 IWS1Q96ST2 819 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 SELENOSQ9BQE4 189 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 MTA3Q9BTC8 594 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 IFIH1Q9BYX4 1025 aaKnown RBP16.27■□□□□ 0.19
SNPH-203ENST00000614659 GOLGA6CA6NDK9 693 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 GOLGA6DP0CG33 693 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 BCRP11274 1271 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 MYOCDQ8IZQ8 938 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 NBPF3Q9H094 633 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 GOLGA6AQ9NYA3 693 aa16.27■□□□□ 0.19
SNPH-203ENST00000614659 BTBD18B2RXH4 712 aa16.26■□□□□ 0.19
SNPH-203ENST00000614659 RCAN1P53805 252 aa16.26■□□□□ 0.19
SNPH-203ENST00000614659 FAM47AQ5JRC9 791 aa16.26■□□□□ 0.19
SNPH-203ENST00000614659 MAPK8IP1Q9UQF2 711 aa16.26■□□□□ 0.19
SNPH-203ENST00000614659 RABGAP1Q9Y3P9 1069 aa16.26■□□□□ 0.19
SNPH-203ENST00000614659 CFBP00751 764 aa16.26■□□□□ 0.19
SNPH-203ENST00000614659 CPLX4Q7Z7G2 160 aa16.26■□□□□ 0.19
SNPH-203ENST00000614659 RETREG2Q8NC44 543 aa16.26■□□□□ 0.19
SNPH-203ENST00000614659 CCDC97Q96F63 343 aaPredicted RBP16.26■□□□□ 0.19
SNPH-203ENST00000614659 PLCB1Q9NQ66 1216 aa16.26■□□□□ 0.19
SNPH-203ENST00000614659 FANCLQ9NW38 375 aa16.26■□□□□ 0.19
SNPH-203ENST00000614659 GOLGA6BA6NDN3 693 aa16.26■□□□□ 0.19
SNPH-203ENST00000614659 EEF1GP26641 437 aaKnown RBP16.26■□□□□ 0.19
SNPH-203ENST00000614659 FAM182BQ5T319 152 aa16.26■□□□□ 0.19
SNPH-203ENST00000614659 FAM212AQ96EL1 285 aa16.26■□□□□ 0.19
SNPH-203ENST00000614659 CCDC114Q96M63 670 aa16.26■□□□□ 0.19
SNPH-203ENST00000614659 MLXIPQ9HAP2 919 aa16.26■□□□□ 0.19
SNPH-203ENST00000614659 FOSP01100 380 aaPredicted RBP16.26■□□□□ 0.19
SNPH-203ENST00000614659 MMP1P03956 469 aa16.26■□□□□ 0.19
SNPH-203ENST00000614659 UBLCP1Q8WVY7 318 aaPredicted RBP16.26■□□□□ 0.19
SNPH-203ENST00000614659 PUS3Q9BZE2 481 aaKnown RBP16.26■□□□□ 0.19
SNPH-203ENST00000614659 ADD3Q9UEY8 706 aaKnown RBP16.26■□□□□ 0.19
SNPH-203ENST00000614659 ABT1Q9ULW3 272 aaKnown RBP16.26■□□□□ 0.19
SNPH-203ENST00000614659 GPATCH4Q5T3I0 446 aaKnown RBP16.25■□□□□ 0.19
SNPH-203ENST00000614659 CCDC125Q86Z20 511 aa16.25■□□□□ 0.19
SNPH-203ENST00000614659 ANKRD35Q8N283 1001 aa16.25■□□□□ 0.19
SNPH-203ENST00000614659 SYMPKQ92797 1274 aaKnown RBP16.25■□□□□ 0.19
SNPH-203ENST00000614659 SSX2IPQ9Y2D8 614 aa16.25■□□□□ 0.19
SNPH-203ENST00000614659 HYOU1Q9Y4L1 999 aa16.25■□□□□ 0.19
SNPH-203ENST00000614659 STK36Q9NRP7 1315 aa16.25■□□□□ 0.19
SNPH-203ENST00000614659 RPS6KA1Q15418 735 aa16.25■□□□□ 0.19
SNPH-203ENST00000614659 DHTKD1Q96HY7 919 aaPredicted RBP16.25■□□□□ 0.19
SNPH-203ENST00000614659 ADKP55263 362 aaKnown RBP16.25■□□□□ 0.19
SNPH-203ENST00000614659 PPP1R14CQ8TAE6 165 aa16.25■□□□□ 0.19
SNPH-203ENST00000614659 RSRC1Q96IZ7 334 aaKnown RBP16.25■□□□□ 0.19
SNPH-203ENST00000614659 PPP1R13BQ96KQ4 1090 aa16.25■□□□□ 0.19
SNPH-203ENST00000614659 CSRNP1Q96S65 589 aa16.25■□□□□ 0.19
SNPH-203ENST00000614659 PARP2Q9UGN5 583 aa16.25■□□□□ 0.19
SNPH-203ENST00000614659 ECM2O94769 699 aaPredicted RBP16.25■□□□□ 0.19
SNPH-203ENST00000614659 PCDHA4Q9UN74 947 aa16.25■□□□□ 0.19
SNPH-203ENST00000614659 RC3H1Q5TC82 1133 aaKnown RBP16.24■□□□□ 0.19
SNPH-203ENST00000614659 PYCARDQ9ULZ3 195 aa16.24■□□□□ 0.19
SNPH-203ENST00000614659 PRPF3O43395 683 aaKnown RBP16.24■□□□□ 0.19
SNPH-203ENST00000614659 N4BP1O75113 896 aaKnown RBP16.24■□□□□ 0.19
SNPH-203ENST00000614659 TCP1P17987 556 aaKnown RBP16.24■□□□□ 0.19
SNPH-203ENST00000614659 EXOC8Q8IYI6 725 aa16.24■□□□□ 0.19
SNPH-203ENST00000614659 ENOX1Q8TC92 643 aaKnown RBP16.24■□□□□ 0.19
SNPH-203ENST00000614659 RABGGTAQ92696 567 aa16.24■□□□□ 0.19
SNPH-203ENST00000614659 PKD2L1Q9P0L9 805 aa16.24■□□□□ 0.19
SNPH-203ENST00000614659 SPOPO43791 374 aa16.24■□□□□ 0.19
SNPH-203ENST00000614659 OAS2P29728 719 aaKnown RBP16.24■□□□□ 0.19
SNPH-203ENST00000614659 LRMPQ12912 555 aa16.24■□□□□ 0.19
SNPH-203ENST00000614659 FAM160B1Q5W0V3 765 aa16.24■□□□□ 0.19
SNPH-203ENST00000614659 FBXO11Q86XK2 927 aa16.24■□□□□ 0.19
SNPH-203ENST00000614659 BPIFA3Q9BQP9 254 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms