RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.6■□□□□ 0.731e-5■■■□□ 18
SSBP4-213ENST00000602088 RANBP17Q9H2T7 1088 aaKnown RBP19.6■□□□□ 0.73
SSBP4-213ENST00000602088 IFIT3O14879 490 aaKnown RBP19.59■□□□□ 0.73
SSBP4-213ENST00000602088 SGPL1O95470 568 aa19.59■□□□□ 0.73
SSBP4-213ENST00000602088 GOLGA8HP0CJ92 632 aa19.59■□□□□ 0.73
SSBP4-213ENST00000602088 ANTXR2P58335 489 aa19.59■□□□□ 0.73
SSBP4-213ENST00000602088 CHST3Q7LGC8 479 aa19.59■□□□□ 0.73
SSBP4-213ENST00000602088 DEFB118Q96PH6 123 aa19.59■□□□□ 0.73
SSBP4-213ENST00000602088 FBXO40Q9UH90 709 aa19.59■□□□□ 0.73
SSBP4-213ENST00000602088 ERICH2A1L162 156 aa19.58■□□□□ 0.72
SSBP4-213ENST00000602088 PGK2P07205 417 aa19.58■□□□□ 0.72
SSBP4-213ENST00000602088 CYP2C19P33261 490 aa19.58■□□□□ 0.72
SSBP4-213ENST00000602088 ZNF792Q3KQV3 632 aa19.58■□□□□ 0.72
SSBP4-213ENST00000602088 TKFCQ3LXA3 575 aa19.58■□□□□ 0.72
SSBP4-213ENST00000602088 CCDC174Q6PII3 467 aa19.58■□□□□ 0.72
SSBP4-213ENST00000602088 IGDCC4Q8TDY8 1250 aa19.58■□□□□ 0.72
SSBP4-213ENST00000602088 MAML3Q96JK9 1138 aa19.58■□□□□ 0.72
SSBP4-213ENST00000602088 DIS3Q9Y2L1 958 aaKnown RBP19.58■□□□□ 0.72
SSBP4-213ENST00000602088 DNAJC25-GNG10A0A024R161 153 aa19.57■□□□□ 0.72
SSBP4-213ENST00000602088 ICAM1P05362 532 aa19.57■□□□□ 0.72
SSBP4-213ENST00000602088 CAPN2P17655 700 aa19.57■□□□□ 0.72
SSBP4-213ENST00000602088 SART3Q15020 963 aaKnown RBP19.57■□□□□ 0.72
SSBP4-213ENST00000602088 ASPRV1Q53RT3 343 aa19.57■□□□□ 0.72
SSBP4-213ENST00000602088 RNF20Q5VTR2 975 aa19.57■□□□□ 0.72
SSBP4-213ENST00000602088 DDX11Q96FC9 970 aa19.57■□□□□ 0.72
SSBP4-213ENST00000602088 UBA5Q9GZZ9 404 aa19.57■□□□□ 0.72
SSBP4-213ENST00000602088 CRISPLD2Q9H0B8 497 aa19.57■□□□□ 0.72
SSBP4-213ENST00000602088 HOMER2Q9NSB8 354 aa19.57■□□□□ 0.72
SSBP4-213ENST00000602088 ALAS1P13196 640 aa19.56■□□□□ 0.72
SSBP4-213ENST00000602088 CCND3P30281 292 aaPredicted RBP19.56■□□□□ 0.72
SSBP4-213ENST00000602088 COL9A3Q14050 684 aaPredicted RBP19.56■□□□□ 0.72
SSBP4-213ENST00000602088 WTAPQ15007 396 aa19.56■□□□□ 0.72
SSBP4-213ENST00000602088 TMEM67Q5HYA8 995 aa19.56■□□□□ 0.72
SSBP4-213ENST00000602088 ANKRD35Q8N283 1001 aa19.56■□□□□ 0.72
SSBP4-213ENST00000602088 TRERF1Q96PN7 1200 aa19.56■□□□□ 0.72
SSBP4-213ENST00000602088 MTA3Q9BTC8 594 aa19.56■□□□□ 0.72
SSBP4-213ENST00000602088 CPVLQ9H3G5 476 aa19.56■□□□□ 0.72
SSBP4-213ENST00000602088 ACAD9Q9H845 621 aa19.56■□□□□ 0.72
SSBP4-213ENST00000602088 SENP2Q9HC62 589 aa19.56■□□□□ 0.72
SSBP4-213ENST00000602088 RNF146Q9NTX7 359 aa19.56■□□□□ 0.72
SSBP4-213ENST00000602088 CCPG1Q9ULG6 757 aa19.56■□□□□ 0.72
SSBP4-213ENST00000602088 PLXNA1Q9UIW2 1896 aa19.56■□□□□ 0.72
SSBP4-213ENST00000602088 PRC1O43663 620 aa19.55■□□□□ 0.72
SSBP4-213ENST00000602088 TFRCP02786 760 aaKnown RBP19.55■□□□□ 0.72
SSBP4-213ENST00000602088 PARP1P09874 1014 aaKnown RBP19.55■□□□□ 0.72
SSBP4-213ENST00000602088 MCM5P33992 734 aa19.55■□□□□ 0.72
SSBP4-213ENST00000602088 SMCHD1A6NHR9 2005 aa19.54■□□□□ 0.72
SSBP4-213ENST00000602088 CYBAP13498 195 aa19.54■□□□□ 0.72
SSBP4-213ENST00000602088 TSGA10IPQ3SY00 556 aa19.54■□□□□ 0.72
SSBP4-213ENST00000602088 MUM1L1Q5H9M0 696 aa19.54■□□□□ 0.72
SSBP4-213ENST00000602088 RASEFQ8IZ41 740 aa19.54■□□□□ 0.72
SSBP4-213ENST00000602088 ADGRF4Q8IZF3 695 aa19.54■□□□□ 0.72
SSBP4-213ENST00000602088 STAG2Q8N3U4 1231 aa19.54■□□□□ 0.72
SSBP4-213ENST00000602088 TINF2Q9BSI4 451 aa19.54■□□□□ 0.72
SSBP4-213ENST00000602088 MAD2L2Q9UI95 211 aa19.54■□□□□ 0.72
SSBP4-213ENST00000602088 PNMA2Q9UL42 364 aa19.54■□□□□ 0.72
SSBP4-213ENST00000602088 TROAPQ12815 778 aa19.53■□□□□ 0.72
SSBP4-213ENST00000602088 LHX8Q68G74 356 aa19.53■□□□□ 0.72
SSBP4-213ENST00000602088 UBE2Q1Q7Z7E8 422 aa19.53■□□□□ 0.72
SSBP4-213ENST00000602088 TRPV1Q8NER1 839 aa19.53■□□□□ 0.72
SSBP4-213ENST00000602088 TMEM87BQ96K49 555 aa19.53■□□□□ 0.72
SSBP4-213ENST00000602088 LY9Q9HBG7 655 aa19.53■□□□□ 0.72
SSBP4-213ENST00000602088 A1CFQ9NQ94 594 aaKnown RBP19.53■□□□□ 0.72
SSBP4-213ENST00000602088 WDR19Q8NEZ3 1342 aa19.52■□□□□ 0.72
SSBP4-213ENST00000602088 PALM3A6NDB9 673 aaPredicted RBP19.52■□□□□ 0.72
SSBP4-213ENST00000602088 TAL1P17542 331 aaPredicted RBP19.52■□□□□ 0.72
SSBP4-213ENST00000602088 ZNF467Q7Z7K2 595 aaPredicted RBP19.52■□□□□ 0.72
SSBP4-213ENST00000602088 MSL3Q8N5Y2 521 aaKnown RBP19.52■□□□□ 0.72
SSBP4-213ENST00000602088 NEK1Q96PY6 1258 aa19.52■□□□□ 0.72
SSBP4-213ENST00000602088 JMJD4Q9H9V9 463 aa19.52■□□□□ 0.72
SSBP4-213ENST00000602088 GPHNQ9NQX3 736 aaPredicted RBP19.52■□□□□ 0.72
SSBP4-213ENST00000602088 OGDHLQ9ULD0 1010 aa19.52■□□□□ 0.72
SSBP4-213ENST00000602088 PDE4DIPQ5VU43 2346 aa19.52■□□□□ 0.71
SSBP4-213ENST00000602088 PFASO15067 1338 aa19.51■□□□□ 0.71
SSBP4-213ENST00000602088 KLRF2D3W0D1 207 aa19.51■□□□□ 0.71
SSBP4-213ENST00000602088 SH2B2O14492 632 aaPredicted RBP19.51■□□□□ 0.71
SSBP4-213ENST00000602088 REC8O95072 547 aa19.51■□□□□ 0.71
SSBP4-213ENST00000602088 CNGA1P29973 690 aa19.51■□□□□ 0.71
SSBP4-213ENST00000602088 CNTN2Q02246 1040 aa19.51■□□□□ 0.71
SSBP4-213ENST00000602088 GRM4Q14833 912 aa19.51■□□□□ 0.71
SSBP4-213ENST00000602088 PRAMEF19Q5SWL8 479 aa19.51■□□□□ 0.71
SSBP4-213ENST00000602088 MAMDC4Q6UXC1 1216 aa19.51■□□□□ 0.71
SSBP4-213ENST00000602088 CATIPQ7Z7H3 387 aa19.51■□□□□ 0.71
SSBP4-213ENST00000602088 TMTC2Q8N394 836 aa19.51■□□□□ 0.71
SSBP4-213ENST00000602088 FAM133AQ8N9E0 248 aa19.51■□□□□ 0.71
SSBP4-213ENST00000602088 KCNB2Q92953 911 aa19.51■□□□□ 0.71
SSBP4-213ENST00000602088 FGD4Q96M96 766 aa19.51■□□□□ 0.71
SSBP4-213ENST00000602088 NRBP1Q9UHY1 535 aa19.51■□□□□ 0.71
SSBP4-213ENST00000602088 POTEB2H3BUK9 544 aa19.5■□□□□ 0.71
SSBP4-213ENST00000602088 LIFRP42702 1097 aa19.5■□□□□ 0.71
SSBP4-213ENST00000602088 KRT32Q14532 448 aa19.5■□□□□ 0.71
SSBP4-213ENST00000602088 CDC37Q16543 378 aaPredicted RBP19.5■□□□□ 0.71
SSBP4-213ENST00000602088 ADCK5Q3MIX3 580 aa19.5■□□□□ 0.71
SSBP4-213ENST00000602088 ANKLE1Q8NAG6 615 aa19.5■□□□□ 0.71
SSBP4-213ENST00000602088 VAT1LQ9HCJ6 419 aa19.5■□□□□ 0.71
SSBP4-213ENST00000602088 CYP39A1Q9NYL5 469 aa19.5■□□□□ 0.71
SSBP4-213ENST00000602088 DDX20Q9UHI6 824 aaKnown RBP19.5■□□□□ 0.71
SSBP4-213ENST00000602088 SYNGAP1Q96PV0 1343 aa19.5■□□□□ 0.71
SSBP4-213ENST00000602088 NFIBO00712 420 aa19.49■□□□□ 0.71
SSBP4-213ENST00000602088 SEPT4O43236 478 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms