RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 PRC1O43663 620 aa21.97■■□□□ 1.11
ERCC1-207ENST00000588738 GJB1P08034 283 aa21.97■■□□□ 1.11
ERCC1-207ENST00000588738 TRIM32Q13049 653 aa21.97■■□□□ 1.11
ERCC1-207ENST00000588738 KRT32Q14532 448 aa21.97■■□□□ 1.11
ERCC1-207ENST00000588738 MFSD14CQ5VZR4 134 aa21.97■■□□□ 1.11
ERCC1-207ENST00000588738 DDX11Q96FC9 970 aa21.97■■□□□ 1.11
ERCC1-207ENST00000588738 TMEM87BQ96K49 555 aa21.97■■□□□ 1.11
ERCC1-207ENST00000588738 HMX1Q9NP08 348 aaPredicted RBP21.97■■□□□ 1.11
ERCC1-207ENST00000588738 RPTORQ8N122 1335 aa21.97■■□□□ 1.11
ERCC1-207ENST00000588738 BRCA2P51587 3418 aa21.97■■□□□ 1.11
ERCC1-207ENST00000588738 ICAM1P05362 532 aa21.96■■□□□ 1.11
ERCC1-207ENST00000588738 ALAS1P13196 640 aa21.96■■□□□ 1.11
ERCC1-207ENST00000588738 PRKAR2AP13861 404 aaKnown RBP21.96■■□□□ 1.11
ERCC1-207ENST00000588738 OLFML2BQ68BL8 750 aa21.96■■□□□ 1.11
ERCC1-207ENST00000588738 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.96■■□□□ 1.11
ERCC1-207ENST00000588738 ANKRD35Q8N283 1001 aa21.96■■□□□ 1.11
ERCC1-207ENST00000588738 TMTC2Q8N394 836 aa21.96■■□□□ 1.11
ERCC1-207ENST00000588738 NEK1Q96PY6 1258 aa21.96■■□□□ 1.11
ERCC1-207ENST00000588738 UBA5Q9GZZ9 404 aa21.96■■□□□ 1.11
ERCC1-207ENST00000588738 HOMER2Q9NSB8 354 aa21.96■■□□□ 1.11
ERCC1-207ENST00000588738 FLRT1Q9NZU1 646 aa21.96■■□□□ 1.11
ERCC1-207ENST00000588738 PNMA2Q9UL42 364 aa21.96■■□□□ 1.11
ERCC1-207ENST00000588738 CCPG1Q9ULG6 757 aa21.96■■□□□ 1.11
ERCC1-207ENST00000588738 PGK2P07205 417 aa21.95■■□□□ 1.1
ERCC1-207ENST00000588738 EN2P19622 333 aaPredicted RBP21.95■■□□□ 1.1
ERCC1-207ENST00000588738 CACNB2Q08289 660 aaPredicted RBP21.95■■□□□ 1.1
ERCC1-207ENST00000588738 MAP3K21Q5TCX8 1036 aa21.95■■□□□ 1.1
ERCC1-207ENST00000588738 CATIPQ7Z7H3 387 aa21.95■■□□□ 1.1
ERCC1-207ENST00000588738 RASEFQ8IZ41 740 aa21.95■■□□□ 1.1
ERCC1-207ENST00000588738 TRERF1Q96PN7 1200 aa21.95■■□□□ 1.1
ERCC1-207ENST00000588738 ACAD9Q9H845 621 aa21.95■■□□□ 1.1
ERCC1-207ENST00000588738 SENP2Q9HC62 589 aa21.95■■□□□ 1.1
ERCC1-207ENST00000588738 RNF146Q9NTX7 359 aa21.95■■□□□ 1.1
ERCC1-207ENST00000588738 DIS3Q9Y2L1 958 aaKnown RBP21.95■■□□□ 1.1
ERCC1-207ENST00000588738 EPB41L2O43491 1005 aaKnown RBP21.94■■□□□ 1.1
ERCC1-207ENST00000588738 HSPA4P34932 840 aa21.94■■□□□ 1.1
ERCC1-207ENST00000588738 GJA8P48165 433 aa21.94■■□□□ 1.1
ERCC1-207ENST00000588738 MAML3Q96JK9 1138 aa21.94■■□□□ 1.1
ERCC1-207ENST00000588738 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.94■■□□□ 1.1
ERCC1-207ENST00000588738 LY9Q9HBG7 655 aa21.94■■□□□ 1.1
ERCC1-207ENST00000588738 PAK6Q9NQU5 681 aaPredicted RBP21.94■■□□□ 1.1
ERCC1-207ENST00000588738 SMCHD1A6NHR9 2005 aa21.93■■□□□ 1.1
ERCC1-207ENST00000588738 DHX16O60231 1041 aaKnown RBP21.93■■□□□ 1.1
ERCC1-207ENST00000588738 MLLT1Q03111 559 aaPredicted RBP21.93■■□□□ 1.1
ERCC1-207ENST00000588738 ZNF792Q3KQV3 632 aa21.93■■□□□ 1.1
ERCC1-207ENST00000588738 ADGRF4Q8IZF3 695 aa21.93■■□□□ 1.1
ERCC1-207ENST00000588738 KCNB2Q92953 911 aa21.93■■□□□ 1.1
ERCC1-207ENST00000588738 DEFB118Q96PH6 123 aa21.93■■□□□ 1.1
ERCC1-207ENST00000588738 CPVLQ9H3G5 476 aa21.93■■□□□ 1.1
ERCC1-207ENST00000588738 MYH6P13533 1939 aa21.92■■□□□ 1.1
ERCC1-207ENST00000588738 DNAJC25-GNG10A0A024R161 153 aa21.92■■□□□ 1.1
ERCC1-207ENST00000588738 PALM3A6NDB9 673 aaPredicted RBP21.92■■□□□ 1.1
ERCC1-207ENST00000588738 KLRF2D3W0D1 207 aa21.92■■□□□ 1.1
ERCC1-207ENST00000588738 SGPL1O95470 568 aa21.92■■□□□ 1.1
ERCC1-207ENST00000588738 IGHA2P01877 340 aa21.92■■□□□ 1.1
ERCC1-207ENST00000588738 HMGB1P09429 215 aaKnown RBP21.92■■□□□ 1.1
ERCC1-207ENST00000588738 CAPN2P17655 700 aa21.92■■□□□ 1.1
ERCC1-207ENST00000588738 CYP2C19P33261 490 aa21.92■■□□□ 1.1
ERCC1-207ENST00000588738 LIFRP42702 1097 aa21.92■■□□□ 1.1
ERCC1-207ENST00000588738 TROAPQ12815 778 aa21.92■■□□□ 1.1
ERCC1-207ENST00000588738 GRM4Q14833 912 aa21.92■■□□□ 1.1
ERCC1-207ENST00000588738 NFXL1Q6ZNB6 911 aa21.92■■□□□ 1.1
ERCC1-207ENST00000588738 STAG2Q8N3U4 1231 aa21.92■■□□□ 1.1
ERCC1-207ENST00000588738 U2AF1L4Q8WU68 220 aaKnown RBP21.92■■□□□ 1.1
ERCC1-207ENST00000588738 GPHNQ9NQX3 736 aaPredicted RBP21.92■■□□□ 1.1
ERCC1-207ENST00000588738 MAD2L2Q9UI95 211 aa21.92■■□□□ 1.1
ERCC1-207ENST00000588738 PFASO15067 1338 aa21.91■■□□□ 1.1
ERCC1-207ENST00000588738 WDR19Q8NEZ3 1342 aa21.91■■□□□ 1.1
ERCC1-207ENST00000588738 CCDC69A6NI79 296 aa21.91■■□□□ 1.1
ERCC1-207ENST00000588738 SH2B2O14492 632 aaPredicted RBP21.91■■□□□ 1.1
ERCC1-207ENST00000588738 COL9A3Q14050 684 aaPredicted RBP21.91■■□□□ 1.1
ERCC1-207ENST00000588738 ADCK5Q3MIX3 580 aa21.91■■□□□ 1.1
ERCC1-207ENST00000588738 DHX32Q7L7V1 743 aaKnown RBP21.91■■□□□ 1.1
ERCC1-207ENST00000588738 ZNF654Q8IZM8 581 aa21.91■■□□□ 1.1
ERCC1-207ENST00000588738 VAT1LQ9HCJ6 419 aa21.91■■□□□ 1.1
ERCC1-207ENST00000588738 TFRCP02786 760 aaKnown RBP21.9■■□□□ 1.1
ERCC1-207ENST00000588738 CDC37Q16543 378 aaPredicted RBP21.9■■□□□ 1.1
ERCC1-207ENST00000588738 MUM1L1Q5H9M0 696 aa21.9■■□□□ 1.1
ERCC1-207ENST00000588738 NUP133Q8WUM0 1156 aa21.9■■□□□ 1.1
ERCC1-207ENST00000588738 MAP3K14Q99558 947 aa21.9■■□□□ 1.1
ERCC1-207ENST00000588738 LRRC2Q9BYS8 371 aa21.9■■□□□ 1.1
ERCC1-207ENST00000588738 JMJD4Q9H9V9 463 aa21.9■■□□□ 1.1
ERCC1-207ENST00000588738 A1CFQ9NQ94 594 aaKnown RBP21.9■■□□□ 1.1
ERCC1-207ENST00000588738 SNX14Q9Y5W7 946 aa21.9■■□□□ 1.1
ERCC1-207ENST00000588738 DDAH1O94760 285 aa21.89■■□□□ 1.09
ERCC1-207ENST00000588738 CCND3P30281 292 aaPredicted RBP21.89■■□□□ 1.09
ERCC1-207ENST00000588738 EXOSC10Q01780 885 aaKnown RBP21.89■■□□□ 1.09
ERCC1-207ENST00000588738 MSL3Q8N5Y2 521 aaKnown RBP21.89■■□□□ 1.09
ERCC1-207ENST00000588738 TINF2Q9BSI4 451 aa21.89■■□□□ 1.09
ERCC1-207ENST00000588738 USP26Q9BXU7 913 aa21.89■■□□□ 1.09
ERCC1-207ENST00000588738 POTEB2H3BUK9 544 aa21.88■■□□□ 1.09
ERCC1-207ENST00000588738 CALM1P0DP23 149 aa21.88■■□□□ 1.09
ERCC1-207ENST00000588738 CALM2P0DP24 149 aa21.88■■□□□ 1.09
ERCC1-207ENST00000588738 CALM3P0DP25 149 aa21.88■■□□□ 1.09
ERCC1-207ENST00000588738 CNGA1P29973 690 aa21.88■■□□□ 1.09
ERCC1-207ENST00000588738 KIF5BP33176 963 aa21.88■■□□□ 1.09
ERCC1-207ENST00000588738 NSMFQ6X4W1 530 aa21.88■■□□□ 1.09
ERCC1-207ENST00000588738 ZNF467Q7Z7K2 595 aaPredicted RBP21.88■■□□□ 1.09
ERCC1-207ENST00000588738 CTCFLQ8NI51 663 aaPredicted RBP21.88■■□□□ 1.09
ERCC1-207ENST00000588738 SHISA4Q96DD7 197 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms