RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 ANKRD35Q8N283 1001 aa17.36■□□□□ 0.37
ATG4D-207ENST00000587256 CHST13Q8NET6 341 aa17.36■□□□□ 0.37
ATG4D-207ENST00000587256 ANKS1AQ92625 1134 aa17.36■□□□□ 0.37
ATG4D-207ENST00000587256 MAML3Q96JK9 1138 aa17.36■□□□□ 0.37
ATG4D-207ENST00000587256 AGBL1Q96MI9 1066 aa17.36■□□□□ 0.37
ATG4D-207ENST00000587256 ACAD9Q9H845 621 aa17.36■□□□□ 0.37
ATG4D-207ENST00000587256 RNF146Q9NTX7 359 aa17.36■□□□□ 0.37
ATG4D-207ENST00000587256 CCPG1Q9ULG6 757 aa17.36■□□□□ 0.37
ATG4D-207ENST00000587256 IFIT3O14879 490 aaKnown RBP17.35■□□□□ 0.37
ATG4D-207ENST00000587256 ALAS1P13196 640 aa17.35■□□□□ 0.37
ATG4D-207ENST00000587256 CCND3P30281 292 aaPredicted RBP17.35■□□□□ 0.37
ATG4D-207ENST00000587256 RANBP17Q9H2T7 1088 aaKnown RBP17.35■□□□□ 0.37
ATG4D-207ENST00000587256 ZNF536O15090 1300 aa17.35■□□□□ 0.37
ATG4D-207ENST00000587256 SLC27A2O14975 620 aa17.34■□□□□ 0.37
ATG4D-207ENST00000587256 ICAM1P05362 532 aa17.34■□□□□ 0.37
ATG4D-207ENST00000587256 CNGA1P29973 690 aa17.34■□□□□ 0.37
ATG4D-207ENST00000587256 TKFCQ3LXA3 575 aa17.34■□□□□ 0.37
ATG4D-207ENST00000587256 ASPRV1Q53RT3 343 aa17.34■□□□□ 0.37
ATG4D-207ENST00000587256 CREB3L3Q68CJ9 461 aa17.34■□□□□ 0.37
ATG4D-207ENST00000587256 PDE4DIPQ5VU43 2346 aa17.33■□□□□ 0.37
ATG4D-207ENST00000587256 PLXNA1Q9UIW2 1896 aa17.33■□□□□ 0.37
ATG4D-207ENST00000587256 DHX16O60231 1041 aaKnown RBP17.33■□□□□ 0.36
ATG4D-207ENST00000587256 PARP1P09874 1014 aaKnown RBP17.33■□□□□ 0.36
ATG4D-207ENST00000587256 CYBAP13498 195 aa17.33■□□□□ 0.36
ATG4D-207ENST00000587256 CAPN2P17655 700 aa17.33■□□□□ 0.36
ATG4D-207ENST00000587256 WTAPQ15007 396 aa17.33■□□□□ 0.36
ATG4D-207ENST00000587256 SEC23AQ15436 765 aa17.33■□□□□ 0.36
ATG4D-207ENST00000587256 ZNF792Q3KQV3 632 aa17.33■□□□□ 0.36
ATG4D-207ENST00000587256 TMEM67Q5HYA8 995 aa17.33■□□□□ 0.36
ATG4D-207ENST00000587256 RNF20Q5VTR2 975 aa17.33■□□□□ 0.36
ATG4D-207ENST00000587256 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.33■□□□□ 0.36
ATG4D-207ENST00000587256 CHST3Q7LGC8 479 aa17.33■□□□□ 0.36
ATG4D-207ENST00000587256 MB21D2Q8IYB1 491 aaPredicted RBP17.33■□□□□ 0.36
ATG4D-207ENST00000587256 TRERF1Q96PN7 1200 aa17.33■□□□□ 0.36
ATG4D-207ENST00000587256 CRISPLD2Q9H0B8 497 aa17.33■□□□□ 0.36
ATG4D-207ENST00000587256 DIS3Q9Y2L1 958 aaKnown RBP17.33■□□□□ 0.36
ATG4D-207ENST00000587256 TAL1P17542 331 aaPredicted RBP17.32■□□□□ 0.36
ATG4D-207ENST00000587256 UBA5Q9GZZ9 404 aa17.32■□□□□ 0.36
ATG4D-207ENST00000587256 CPVLQ9H3G5 476 aa17.32■□□□□ 0.36
ATG4D-207ENST00000587256 TNRC18O15417 2968 aaPredicted RBP17.31■□□□□ 0.36
ATG4D-207ENST00000587256 PFASO15067 1338 aa17.31■□□□□ 0.36
ATG4D-207ENST00000587256 PRC1O43663 620 aa17.31■□□□□ 0.36
ATG4D-207ENST00000587256 MSCO60682 206 aa17.31■□□□□ 0.36
ATG4D-207ENST00000587256 ANTXR2P58335 489 aa17.31■□□□□ 0.36
ATG4D-207ENST00000587256 NSMFQ6X4W1 530 aa17.31■□□□□ 0.36
ATG4D-207ENST00000587256 ANKLE1Q8NAG6 615 aa17.31■□□□□ 0.36
ATG4D-207ENST00000587256 TRPV1Q8NER1 839 aa17.31■□□□□ 0.36
ATG4D-207ENST00000587256 TINF2Q9BSI4 451 aa17.31■□□□□ 0.36
ATG4D-207ENST00000587256 A1CFQ9NQ94 594 aaKnown RBP17.31■□□□□ 0.36
ATG4D-207ENST00000587256 DDX20Q9UHI6 824 aaKnown RBP17.31■□□□□ 0.36
ATG4D-207ENST00000587256 PNMA2Q9UL42 364 aa17.31■□□□□ 0.36
ATG4D-207ENST00000587256 CNPY2Q9Y2B0 182 aa17.31■□□□□ 0.36
ATG4D-207ENST00000587256 ZNFX1Q9P2E3 1918 aaKnown RBP17.31■□□□□ 0.36
ATG4D-207ENST00000587256 WDR19Q8NEZ3 1342 aa17.3■□□□□ 0.36
ATG4D-207ENST00000587256 DNAJC25-GNG10A0A024R161 153 aa17.3■□□□□ 0.36
ATG4D-207ENST00000587256 POTEB2H3BUK9 544 aa17.3■□□□□ 0.36
ATG4D-207ENST00000587256 IGHA2P01877 340 aa17.3■□□□□ 0.36
ATG4D-207ENST00000587256 MCM5P33992 734 aa17.3■□□□□ 0.36
ATG4D-207ENST00000587256 NECTIN1Q15223 517 aa17.3■□□□□ 0.36
ATG4D-207ENST00000587256 CDC37Q16543 378 aaPredicted RBP17.3■□□□□ 0.36
ATG4D-207ENST00000587256 MUM1L1Q5H9M0 696 aa17.3■□□□□ 0.36
ATG4D-207ENST00000587256 OGDHLQ9ULD0 1010 aa17.3■□□□□ 0.36
ATG4D-207ENST00000587256 FRMPD3Q5JV73 1810 aa17.29■□□□□ 0.36
ATG4D-207ENST00000587256 USH1GQ495M9 461 aa17.29■□□□□ 0.36
ATG4D-207ENST00000587256 PRAMEF19Q5SWL8 479 aa17.29■□□□□ 0.36
ATG4D-207ENST00000587256 UBE2Q1Q7Z7E8 422 aa17.29■□□□□ 0.36
ATG4D-207ENST00000587256 CATIPQ7Z7H3 387 aa17.29■□□□□ 0.36
ATG4D-207ENST00000587256 MSL3Q8N5Y2 521 aaKnown RBP17.29■□□□□ 0.36
ATG4D-207ENST00000587256 DIS3LQ8TF46 1054 aaKnown RBP17.29■□□□□ 0.36
ATG4D-207ENST00000587256 HTATIP2Q9BUP3 242 aa17.29■□□□□ 0.36
ATG4D-207ENST00000587256 SENP2Q9HC62 589 aa17.29■□□□□ 0.36
ATG4D-207ENST00000587256 NRBP1Q9UHY1 535 aa17.29■□□□□ 0.36
ATG4D-207ENST00000587256 SYNGAP1Q96PV0 1343 aa17.28■□□□□ 0.36
ATG4D-207ENST00000587256 SEPT4O43236 478 aa17.28■□□□□ 0.36
ATG4D-207ENST00000587256 LHX8Q68G74 356 aa17.28■□□□□ 0.36
ATG4D-207ENST00000587256 NFXL1Q6ZNB6 911 aa17.28■□□□□ 0.36
ATG4D-207ENST00000587256 NECAB2Q7Z6G3 386 aa17.28■□□□□ 0.36
ATG4D-207ENST00000587256 ZNF467Q7Z7K2 595 aaPredicted RBP17.28■□□□□ 0.36
ATG4D-207ENST00000587256 ADGRF4Q8IZF3 695 aa17.28■□□□□ 0.36
ATG4D-207ENST00000587256 PAWRQ96IZ0 340 aaKnown RBP17.28■□□□□ 0.36
ATG4D-207ENST00000587256 ZHX1Q9UKY1 873 aaPredicted RBP17.28■□□□□ 0.36
ATG4D-207ENST00000587256 MKI67P46013 3256 aaKnown RBP17.28■□□□□ 0.36
ATG4D-207ENST00000587256 PTPDC1A2A3K4 754 aa17.27■□□□□ 0.36
ATG4D-207ENST00000587256 KLRF2D3W0D1 207 aa17.27■□□□□ 0.36
ATG4D-207ENST00000587256 NFIBO00712 420 aa17.27■□□□□ 0.36
ATG4D-207ENST00000587256 REC8O95072 547 aa17.27■□□□□ 0.36
ATG4D-207ENST00000587256 CNTN2Q02246 1040 aa17.27■□□□□ 0.36
ATG4D-207ENST00000587256 GRM4Q14833 912 aa17.27■□□□□ 0.36
ATG4D-207ENST00000587256 ANO1Q5XXA6 986 aa17.27■□□□□ 0.36
ATG4D-207ENST00000587256 STAG2Q8N3U4 1231 aa17.27■□□□□ 0.36
ATG4D-207ENST00000587256 FAM133AQ8N9E0 248 aa17.27■□□□□ 0.36
ATG4D-207ENST00000587256 NUP133Q8WUM0 1156 aa17.27■□□□□ 0.36
ATG4D-207ENST00000587256 TMEM87BQ96K49 555 aa17.27■□□□□ 0.36
ATG4D-207ENST00000587256 MTA3Q9BTC8 594 aa17.27■□□□□ 0.36
ATG4D-207ENST00000587256 LY9Q9HBG7 655 aa17.27■□□□□ 0.36
ATG4D-207ENST00000587256 VAT1LQ9HCJ6 419 aa17.27■□□□□ 0.36
ATG4D-207ENST00000587256 CYP39A1Q9NYL5 469 aa17.27■□□□□ 0.36
ATG4D-207ENST00000587256 MAD2L2Q9UI95 211 aa17.27■□□□□ 0.36
ATG4D-207ENST00000587256 CCDC69A6NI79 296 aa17.26■□□□□ 0.35
ATG4D-207ENST00000587256 SH2B2O14492 632 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms