RNA–Protein interactions for RNA: ENST00000587098.1

CCDC130-207, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 617 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-207ENST00000587098 DEFB118Q96PH6 123 aa17.16■□□□□ 0.34
CCDC130-207ENST00000587098 UBA5Q9GZZ9 404 aa17.16■□□□□ 0.34
CCDC130-207ENST00000587098 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.16■□□□□ 0.34
CCDC130-207ENST00000587098 RANBP17Q9H2T7 1088 aaKnown RBP17.16■□□□□ 0.34
CCDC130-207ENST00000587098 SENP2Q9HC62 589 aa17.16■□□□□ 0.34
CCDC130-207ENST00000587098 SLC5A4Q9NY91 659 aa17.16■□□□□ 0.34
CCDC130-207ENST00000587098 SMCHD1A6NHR9 2005 aa17.16■□□□□ 0.34
CCDC130-207ENST00000587098 RBBP6Q7Z6E9 1792 aaKnown RBP17.15■□□□□ 0.34
CCDC130-207ENST00000587098 CYP2C19P33261 490 aa17.15■□□□□ 0.34
CCDC130-207ENST00000587098 ZNF792Q3KQV3 632 aa17.15■□□□□ 0.34
CCDC130-207ENST00000587098 OLFML2BQ68BL8 750 aa17.15■□□□□ 0.34
CCDC130-207ENST00000587098 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.15■□□□□ 0.34
CCDC130-207ENST00000587098 IGDCC4Q8TDY8 1250 aa17.15■□□□□ 0.34
CCDC130-207ENST00000587098 SHISA4Q96DD7 197 aa17.15■□□□□ 0.34
CCDC130-207ENST00000587098 CPVLQ9H3G5 476 aa17.15■□□□□ 0.34
CCDC130-207ENST00000587098 HOMER2Q9NSB8 354 aa17.15■□□□□ 0.34
CCDC130-207ENST00000587098 ERICH2A1L162 156 aa17.14■□□□□ 0.33
CCDC130-207ENST00000587098 ALAS1P13196 640 aa17.14■□□□□ 0.33
CCDC130-207ENST00000587098 TAL1P17542 331 aaPredicted RBP17.14■□□□□ 0.33
CCDC130-207ENST00000587098 CCND3P30281 292 aaPredicted RBP17.14■□□□□ 0.33
CCDC130-207ENST00000587098 TKFCQ3LXA3 575 aa17.14■□□□□ 0.33
CCDC130-207ENST00000587098 DDX11Q96FC9 970 aa17.14■□□□□ 0.33
CCDC130-207ENST00000587098 MAML3Q96JK9 1138 aa17.14■□□□□ 0.33
CCDC130-207ENST00000587098 TRERF1Q96PN7 1200 aa17.14■□□□□ 0.33
CCDC130-207ENST00000587098 FBXO40Q9UH90 709 aa17.14■□□□□ 0.33
CCDC130-207ENST00000587098 ZNF236Q9UL36 1845 aa17.14■□□□□ 0.33
CCDC130-207ENST00000587098 DNAJC25-GNG10A0A024R161 153 aa17.13■□□□□ 0.33
CCDC130-207ENST00000587098 TFRCP02786 760 aaKnown RBP17.13■□□□□ 0.33
CCDC130-207ENST00000587098 ICAM1P05362 532 aa17.13■□□□□ 0.33
CCDC130-207ENST00000587098 PARP1P09874 1014 aaKnown RBP17.13■□□□□ 0.33
CCDC130-207ENST00000587098 WTAPQ15007 396 aa17.13■□□□□ 0.33
CCDC130-207ENST00000587098 SART3Q15020 963 aaKnown RBP17.13■□□□□ 0.33
CCDC130-207ENST00000587098 ASPRV1Q53RT3 343 aa17.13■□□□□ 0.33
CCDC130-207ENST00000587098 TMEM67Q5HYA8 995 aa17.13■□□□□ 0.33
CCDC130-207ENST00000587098 RNF20Q5VTR2 975 aa17.13■□□□□ 0.33
CCDC130-207ENST00000587098 RASEFQ8IZ41 740 aa17.13■□□□□ 0.33
CCDC130-207ENST00000587098 ANKRD35Q8N283 1001 aa17.13■□□□□ 0.33
CCDC130-207ENST00000587098 STAG2Q8N3U4 1231 aa17.13■□□□□ 0.33
CCDC130-207ENST00000587098 CRISPLD2Q9H0B8 497 aa17.13■□□□□ 0.33
CCDC130-207ENST00000587098 ACAD9Q9H845 621 aa17.13■□□□□ 0.33
CCDC130-207ENST00000587098 GPHNQ9NQX3 736 aaPredicted RBP17.13■□□□□ 0.33
CCDC130-207ENST00000587098 RNF146Q9NTX7 359 aa17.13■□□□□ 0.33
CCDC130-207ENST00000587098 CCPG1Q9ULG6 757 aa17.13■□□□□ 0.33
CCDC130-207ENST00000587098 DIS3Q9Y2L1 958 aaKnown RBP17.13■□□□□ 0.33
CCDC130-207ENST00000587098 PRC1O43663 620 aa17.12■□□□□ 0.33
CCDC130-207ENST00000587098 MCM5P33992 734 aa17.12■□□□□ 0.33
CCDC130-207ENST00000587098 TSGA10IPQ3SY00 556 aa17.12■□□□□ 0.33
CCDC130-207ENST00000587098 MUM1L1Q5H9M0 696 aa17.12■□□□□ 0.33
CCDC130-207ENST00000587098 PRAMEF19Q5SWL8 479 aa17.12■□□□□ 0.33
CCDC130-207ENST00000587098 TRPV1Q8NER1 839 aa17.12■□□□□ 0.33
CCDC130-207ENST00000587098 ADGRF4Q8IZF3 695 aa17.11■□□□□ 0.33
CCDC130-207ENST00000587098 TINF2Q9BSI4 451 aa17.11■□□□□ 0.33
CCDC130-207ENST00000587098 MTA3Q9BTC8 594 aa17.11■□□□□ 0.33
CCDC130-207ENST00000587098 LY9Q9HBG7 655 aa17.11■□□□□ 0.33
CCDC130-207ENST00000587098 VAT1LQ9HCJ6 419 aa17.11■□□□□ 0.33
CCDC130-207ENST00000587098 A1CFQ9NQ94 594 aaKnown RBP17.11■□□□□ 0.33
CCDC130-207ENST00000587098 MAD2L2Q9UI95 211 aa17.11■□□□□ 0.33
CCDC130-207ENST00000587098 PALM3A6NDB9 673 aaPredicted RBP17.1■□□□□ 0.33
CCDC130-207ENST00000587098 KLRF2D3W0D1 207 aa17.1■□□□□ 0.33
CCDC130-207ENST00000587098 CYBAP13498 195 aa17.1■□□□□ 0.33
CCDC130-207ENST00000587098 TROAPQ12815 778 aa17.1■□□□□ 0.33
CCDC130-207ENST00000587098 GRM4Q14833 912 aa17.1■□□□□ 0.33
CCDC130-207ENST00000587098 ADCK5Q3MIX3 580 aa17.1■□□□□ 0.33
CCDC130-207ENST00000587098 LHX8Q68G74 356 aa17.1■□□□□ 0.33
CCDC130-207ENST00000587098 TMEM87BQ96K49 555 aa17.1■□□□□ 0.33
CCDC130-207ENST00000587098 NEK1Q96PY6 1258 aa17.1■□□□□ 0.33
CCDC130-207ENST00000587098 LRRC2Q9BYS8 371 aa17.1■□□□□ 0.33
CCDC130-207ENST00000587098 PLXNA1Q9UIW2 1896 aa17.1■□□□□ 0.33
CCDC130-207ENST00000587098 MKI67P46013 3256 aaKnown RBP17.09■□□□□ 0.33
CCDC130-207ENST00000587098 SH2B2O14492 632 aaPredicted RBP17.09■□□□□ 0.33
CCDC130-207ENST00000587098 CAPN2P17655 700 aa17.09■□□□□ 0.33
CCDC130-207ENST00000587098 CNGA1P29973 690 aa17.09■□□□□ 0.33
CCDC130-207ENST00000587098 CNTN2Q02246 1040 aa17.09■□□□□ 0.33
CCDC130-207ENST00000587098 UBE2Q1Q7Z7E8 422 aa17.09■□□□□ 0.33
CCDC130-207ENST00000587098 CATIPQ7Z7H3 387 aa17.09■□□□□ 0.33
CCDC130-207ENST00000587098 KCNB2Q92953 911 aa17.09■□□□□ 0.33
CCDC130-207ENST00000587098 FGD4Q96M96 766 aa17.09■□□□□ 0.33
CCDC130-207ENST00000587098 JMJD4Q9H9V9 463 aa17.09■□□□□ 0.33
CCDC130-207ENST00000587098 OGDHLQ9ULD0 1010 aa17.09■□□□□ 0.33
CCDC130-207ENST00000587098 BAZ2BQ9UIF8 2168 aaKnown RBP17.08■□□□□ 0.33
CCDC130-207ENST00000587098 WDR19Q8NEZ3 1342 aa17.08■□□□□ 0.32
CCDC130-207ENST00000587098 POTEB2H3BUK9 544 aa17.08■□□□□ 0.32
CCDC130-207ENST00000587098 REC8O95072 547 aa17.08■□□□□ 0.32
CCDC130-207ENST00000587098 HSPA4P34932 840 aa17.08■□□□□ 0.32
CCDC130-207ENST00000587098 EXOSC10Q01780 885 aaKnown RBP17.08■□□□□ 0.32
CCDC130-207ENST00000587098 CDC37Q16543 378 aaPredicted RBP17.08■□□□□ 0.32
CCDC130-207ENST00000587098 SLC35G1Q2M3R5 365 aa17.08■□□□□ 0.32
CCDC130-207ENST00000587098 NSMFQ6X4W1 530 aa17.08■□□□□ 0.32
CCDC130-207ENST00000587098 TMTC2Q8N394 836 aa17.08■□□□□ 0.32
CCDC130-207ENST00000587098 FAM133AQ8N9E0 248 aa17.08■□□□□ 0.32
CCDC130-207ENST00000587098 NUP133Q8WUM0 1156 aa17.08■□□□□ 0.32
CCDC130-207ENST00000587098 CLEC4DQ8WXI8 215 aa17.08■□□□□ 0.32
CCDC130-207ENST00000587098 PNMA2Q9UL42 364 aa17.08■□□□□ 0.32
CCDC130-207ENST00000587098 SOWAHBA6NEL2 793 aa17.07■□□□□ 0.32
CCDC130-207ENST00000587098 NFIBO00712 420 aa17.07■□□□□ 0.32
CCDC130-207ENST00000587098 DHX16O60231 1041 aaKnown RBP17.07■□□□□ 0.32
CCDC130-207ENST00000587098 FARP2O94887 1054 aaPredicted RBP17.07■□□□□ 0.32
CCDC130-207ENST00000587098 SNAI1O95863 264 aaPredicted RBP17.07■□□□□ 0.32
CCDC130-207ENST00000587098 LIFRP42702 1097 aa17.07■□□□□ 0.32
CCDC130-207ENST00000587098 KRT32Q14532 448 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms