RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 TOP1P11387 765 aaKnown RBP13.36□□□□□ -0.27
RPAIN-214ENST00000574003 ALAS1P13196 640 aa13.36□□□□□ -0.27
RPAIN-214ENST00000574003 LRRC41Q15345 812 aa13.36□□□□□ -0.27
RPAIN-214ENST00000574003 MUM1L1Q5H9M0 696 aa13.36□□□□□ -0.27
RPAIN-214ENST00000574003 FAM160B2Q86V87 743 aa13.36□□□□□ -0.27
RPAIN-214ENST00000574003 ANKRD35Q8N283 1001 aa13.36□□□□□ -0.27
RPAIN-214ENST00000574003 CHURC1Q8WUH1 139 aa13.36□□□□□ -0.27
RPAIN-214ENST00000574003 CPVLQ9H3G5 476 aa13.36□□□□□ -0.27
RPAIN-214ENST00000574003 ZHX1Q9UKY1 873 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-214ENST00000574003 DIS3Q9Y2L1 958 aaKnown RBP13.36□□□□□ -0.27
RPAIN-214ENST00000574003 DNAH12Q6ZR08 3092 aa13.36□□□□□ -0.27
RPAIN-214ENST00000574003 B4E1Z4 1266 aa13.35□□□□□ -0.27
RPAIN-214ENST00000574003 SOX1O00570 391 aaPredicted RBP13.35□□□□□ -0.27
RPAIN-214ENST00000574003 ZNF213O14771 459 aa13.35□□□□□ -0.27
RPAIN-214ENST00000574003 ADCY6O43306 1168 aa13.35□□□□□ -0.27
RPAIN-214ENST00000574003 GOLGA8HP0CJ92 632 aa13.35□□□□□ -0.27
RPAIN-214ENST00000574003 PTGS1P23219 599 aa13.35□□□□□ -0.27
RPAIN-214ENST00000574003 ADCYAP1R1P41586 468 aa13.35□□□□□ -0.27
RPAIN-214ENST00000574003 MAGEA10P43363 369 aaPredicted RBP13.35□□□□□ -0.27
RPAIN-214ENST00000574003 OAZ1P54368 228 aa13.35□□□□□ -0.27
RPAIN-214ENST00000574003 TICAM2Q86XR7 235 aa13.35□□□□□ -0.27
RPAIN-214ENST00000574003 CHST13Q8NET6 341 aa13.35□□□□□ -0.27
RPAIN-214ENST00000574003 DCAF4Q8WV16 495 aa13.35□□□□□ -0.27
RPAIN-214ENST00000574003 TRERF1Q96PN7 1200 aa13.35□□□□□ -0.27
RPAIN-214ENST00000574003 GDF15Q99988 308 aa13.35□□□□□ -0.27
RPAIN-214ENST00000574003 A1CFQ9NQ94 594 aaKnown RBP13.35□□□□□ -0.27
RPAIN-214ENST00000574003 TCP11L1Q9NUJ3 509 aa13.35□□□□□ -0.27
RPAIN-214ENST00000574003 SZT2Q5T011 3432 aa13.35□□□□□ -0.27
RPAIN-214ENST00000574003 LAMA4Q16363 1823 aa13.34□□□□□ -0.27
RPAIN-214ENST00000574003 MYADML2A6NDP7 307 aa13.34□□□□□ -0.27
RPAIN-214ENST00000574003 SOWAHBA6NEL2 793 aa13.34□□□□□ -0.27
RPAIN-214ENST00000574003 PLA2G6O60733 806 aa13.34□□□□□ -0.27
RPAIN-214ENST00000574003 KDM4AO75164 1064 aa13.34□□□□□ -0.27
RPAIN-214ENST00000574003 PDHBP11177 359 aa13.34□□□□□ -0.27
RPAIN-214ENST00000574003 MFAP1P55081 439 aaKnown RBP13.34□□□□□ -0.27
RPAIN-214ENST00000574003 RTP1P59025 263 aa13.34□□□□□ -0.27
RPAIN-214ENST00000574003 MDM2Q00987 491 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-214ENST00000574003 PPP4R3BQ5MIZ7 849 aa13.34□□□□□ -0.27
RPAIN-214ENST00000574003 SYDE2Q5VT97 1194 aa13.34□□□□□ -0.27
RPAIN-214ENST00000574003 ARRDC4Q8NCT1 418 aa13.34□□□□□ -0.27
RPAIN-214ENST00000574003 ACAD9Q9H845 621 aa13.34□□□□□ -0.27
RPAIN-214ENST00000574003 XPNPEP3Q9NQH7 507 aa13.34□□□□□ -0.27
RPAIN-214ENST00000574003 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-214ENST00000574003 CCPG1Q9ULG6 757 aa13.34□□□□□ -0.27
RPAIN-214ENST00000574003 CNPY2Q9Y2B0 182 aa13.34□□□□□ -0.27
RPAIN-214ENST00000574003 ATP11BQ9Y2G3 1177 aa13.34□□□□□ -0.27
RPAIN-214ENST00000574003 ASTN1O14525 1302 aa13.34□□□□□ -0.27
RPAIN-214ENST00000574003 LCTP09848 1927 aa13.33□□□□□ -0.28
RPAIN-214ENST00000574003 KBTBD13C9JR72 458 aa13.33□□□□□ -0.28
RPAIN-214ENST00000574003 POTEB2H3BUK9 544 aa13.33□□□□□ -0.28
RPAIN-214ENST00000574003 HIP1O00291 1037 aa13.33□□□□□ -0.28
RPAIN-214ENST00000574003 RARBP10826 455 aa13.33□□□□□ -0.28
RPAIN-214ENST00000574003 AKR1A1P14550 325 aa13.33□□□□□ -0.28
RPAIN-214ENST00000574003 PTH1RQ03431 593 aa13.33□□□□□ -0.28
RPAIN-214ENST00000574003 TRIM60Q495X7 471 aa13.33□□□□□ -0.28
RPAIN-214ENST00000574003 MAMDC4Q6UXC1 1216 aa13.33□□□□□ -0.28
RPAIN-214ENST00000574003 SLC39A5Q6ZMH5 540 aa13.33□□□□□ -0.28
RPAIN-214ENST00000574003 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.33□□□□□ -0.28
RPAIN-214ENST00000574003 ARMCX2Q7L311 632 aa13.33□□□□□ -0.28
RPAIN-214ENST00000574003 CCDC144CPQ8IYA2 1237 aa13.33□□□□□ -0.28
RPAIN-214ENST00000574003 FAM133AQ8N9E0 248 aa13.33□□□□□ -0.28
RPAIN-214ENST00000574003 DSCC1Q9BVC3 393 aa13.33□□□□□ -0.28
RPAIN-214ENST00000574003 RANBP17Q9H2T7 1088 aaKnown RBP13.33□□□□□ -0.28
RPAIN-214ENST00000574003 RNF41Q9H4P4 317 aaPredicted RBP13.33□□□□□ -0.28
RPAIN-214ENST00000574003 FBXO40Q9UH90 709 aa13.33□□□□□ -0.28
RPAIN-214ENST00000574003 LAMA3Q16787 3333 aa13.33□□□□□ -0.28
RPAIN-214ENST00000574003 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-214ENST00000574003 CHMLP26374 656 aa13.32□□□□□ -0.28
RPAIN-214ENST00000574003 ZNF543Q08ER8 600 aa13.32□□□□□ -0.28
RPAIN-214ENST00000574003 ACVR2BQ13705 512 aa13.32□□□□□ -0.28
RPAIN-214ENST00000574003 TMEM63BQ5T3F8 832 aa13.32□□□□□ -0.28
RPAIN-214ENST00000574003 BTNL9Q6UXG8 535 aa13.32□□□□□ -0.28
RPAIN-214ENST00000574003 NSMFQ6X4W1 530 aa13.32□□□□□ -0.28
RPAIN-214ENST00000574003 ESR2Q92731 530 aa13.32□□□□□ -0.28
RPAIN-214ENST00000574003 LRCH3Q96II8 777 aa13.32□□□□□ -0.28
RPAIN-214ENST00000574003 UBA5Q9GZZ9 404 aa13.32□□□□□ -0.28
RPAIN-214ENST00000574003 KATNBL1Q9H079 304 aa13.32□□□□□ -0.28
RPAIN-214ENST00000574003 ZSWIM5Q9P217 1185 aa13.32□□□□□ -0.28
RPAIN-214ENST00000574003 TAF6LQ9Y6J9 622 aa13.32□□□□□ -0.28
RPAIN-214ENST00000574003 SYNGAP1Q96PV0 1343 aa13.32□□□□□ -0.28
RPAIN-214ENST00000574003 SYNRGQ9UMZ2 1314 aa13.32□□□□□ -0.28
RPAIN-214ENST00000574003 NFIBO00712 420 aa13.31□□□□□ -0.28
RPAIN-214ENST00000574003 ADAMTS4O75173 837 aa13.31□□□□□ -0.28
RPAIN-214ENST00000574003 FDX1P10109 184 aa13.31□□□□□ -0.28
RPAIN-214ENST00000574003 IMMTQ16891 758 aaKnown RBP13.31□□□□□ -0.28
RPAIN-214ENST00000574003 CCDC144BQ3MJ40 725 aa13.31□□□□□ -0.28
RPAIN-214ENST00000574003 CYB5R4Q7L1T6 521 aa13.31□□□□□ -0.28
RPAIN-214ENST00000574003 EEPD1Q7L9B9 569 aa13.31□□□□□ -0.28
RPAIN-214ENST00000574003 SH3RF1Q7Z6J0 888 aa13.31□□□□□ -0.28
RPAIN-214ENST00000574003 ZNF467Q7Z7K2 595 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-214ENST00000574003 TTC14Q96N46 770 aa13.31□□□□□ -0.28
RPAIN-214ENST00000574003 CYP39A1Q9NYL5 469 aa13.31□□□□□ -0.28
RPAIN-214ENST00000574003 NRBP1Q9UHY1 535 aa13.31□□□□□ -0.28
RPAIN-214ENST00000574003 FAM184BQ9ULE4 1060 aa13.31□□□□□ -0.28
RPAIN-214ENST00000574003 PHF24Q9UPV7 400 aa13.31□□□□□ -0.28
RPAIN-214ENST00000574003 ICAM1P05362 532 aa13.3□□□□□ -0.28
RPAIN-214ENST00000574003 SNHG28P0DPA3 235 aa13.3□□□□□ -0.28
RPAIN-214ENST00000574003 PCP11498 1178 aaKnown RBP13.3□□□□□ -0.28
RPAIN-214ENST00000574003 BAATQ14032 418 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-214ENST00000574003 TKFCQ3LXA3 575 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms