RNA–Protein interactions for RNA: ENST00000567934.5

CDH11-213, Transcript of cadherin 11, humanhuman

TSL 2

Gene CDH11, Length 1,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-213ENST00000567934 PARP1P09874 1014 aaKnown RBP18.34■□□□□ 0.53
CDH11-213ENST00000567934 CNGA1P29973 690 aa18.34■□□□□ 0.53
CDH11-213ENST00000567934 GJA8P48165 433 aa18.34■□□□□ 0.53
CDH11-213ENST00000567934 CACNB2Q08289 660 aaPredicted RBP18.34■□□□□ 0.53
CDH11-213ENST00000567934 NECTIN1Q15223 517 aa18.34■□□□□ 0.53
CDH11-213ENST00000567934 BTNL9Q6UXG8 535 aa18.34■□□□□ 0.53
CDH11-213ENST00000567934 ANKRD35Q8N283 1001 aa18.34■□□□□ 0.53
CDH11-213ENST00000567934 CHST13Q8NET6 341 aa18.34■□□□□ 0.53
CDH11-213ENST00000567934 U2AF1L4Q8WU68 220 aaKnown RBP18.34■□□□□ 0.53
CDH11-213ENST00000567934 FLRT1Q9NZU1 646 aa18.34■□□□□ 0.53
CDH11-213ENST00000567934 CCPG1Q9ULG6 757 aa18.34■□□□□ 0.53
CDH11-213ENST00000567934 SGPL1O95470 568 aa18.33■□□□□ 0.52
CDH11-213ENST00000567934 SNHG28P0DPA3 235 aa18.33■□□□□ 0.52
CDH11-213ENST00000567934 SEC23AQ15436 765 aa18.33■□□□□ 0.52
CDH11-213ENST00000567934 TKFCQ3LXA3 575 aa18.33■□□□□ 0.52
CDH11-213ENST00000567934 ASPRV1Q53RT3 343 aa18.33■□□□□ 0.52
CDH11-213ENST00000567934 TMEM67Q5HYA8 995 aa18.33■□□□□ 0.52
CDH11-213ENST00000567934 TRERF1Q96PN7 1200 aa18.33■□□□□ 0.52
CDH11-213ENST00000567934 UBA5Q9GZZ9 404 aa18.33■□□□□ 0.52
CDH11-213ENST00000567934 ACAD9Q9H845 621 aa18.33■□□□□ 0.52
CDH11-213ENST00000567934 RNF146Q9NTX7 359 aa18.33■□□□□ 0.52
CDH11-213ENST00000567934 CYP2C19P33261 490 aa18.32■□□□□ 0.52
CDH11-213ENST00000567934 MCM5P33992 734 aa18.32■□□□□ 0.52
CDH11-213ENST00000567934 OLFML2BQ68BL8 750 aa18.32■□□□□ 0.52
CDH11-213ENST00000567934 RANBP17Q9H2T7 1088 aaKnown RBP18.32■□□□□ 0.52
CDH11-213ENST00000567934 PAK6Q9NQU5 681 aaPredicted RBP18.32■□□□□ 0.52
CDH11-213ENST00000567934 ZNF536O15090 1300 aa18.31■□□□□ 0.52
CDH11-213ENST00000567934 PRC1O43663 620 aa18.31■□□□□ 0.52
CDH11-213ENST00000567934 ICAM1P05362 532 aa18.31■□□□□ 0.52
CDH11-213ENST00000567934 CCND3P30281 292 aaPredicted RBP18.31■□□□□ 0.52
CDH11-213ENST00000567934 MB21D2Q8IYB1 491 aaPredicted RBP18.31■□□□□ 0.52
CDH11-213ENST00000567934 MAML3Q96JK9 1138 aa18.31■□□□□ 0.52
CDH11-213ENST00000567934 CPVLQ9H3G5 476 aa18.31■□□□□ 0.52
CDH11-213ENST00000567934 VAT1LQ9HCJ6 419 aa18.31■□□□□ 0.52
CDH11-213ENST00000567934 MCM3APO60318 1980 aa18.31■□□□□ 0.52
CDH11-213ENST00000567934 REC8O95072 547 aa18.3■□□□□ 0.52
CDH11-213ENST00000567934 MAP3K21Q5TCX8 1036 aa18.3■□□□□ 0.52
CDH11-213ENST00000567934 NFXL1Q6ZNB6 911 aa18.3■□□□□ 0.52
CDH11-213ENST00000567934 CATIPQ7Z7H3 387 aa18.3■□□□□ 0.52
CDH11-213ENST00000567934 PNMA2Q9UL42 364 aa18.3■□□□□ 0.52
CDH11-213ENST00000567934 DIS3Q9Y2L1 958 aaKnown RBP18.3■□□□□ 0.52
CDH11-213ENST00000567934 BAZ2BQ9UIF8 2168 aaKnown RBP18.3■□□□□ 0.52
CDH11-213ENST00000567934 ANTXR2P58335 489 aa18.29■□□□□ 0.52
CDH11-213ENST00000567934 ZNF792Q3KQV3 632 aa18.29■□□□□ 0.52
CDH11-213ENST00000567934 NUP133Q8WUM0 1156 aa18.29■□□□□ 0.52
CDH11-213ENST00000567934 TMEM87BQ96K49 555 aa18.29■□□□□ 0.52
CDH11-213ENST00000567934 CCDC69A6NI79 296 aa18.28■□□□□ 0.52
CDH11-213ENST00000567934 KLRF2D3W0D1 207 aa18.28■□□□□ 0.52
CDH11-213ENST00000567934 POTEB2H3BUK9 544 aa18.28■□□□□ 0.52
CDH11-213ENST00000567934 CAPN2P17655 700 aa18.28■□□□□ 0.52
CDH11-213ENST00000567934 KRT32Q14532 448 aa18.28■□□□□ 0.52
CDH11-213ENST00000567934 PRAMEF19Q5SWL8 479 aa18.28■□□□□ 0.52
CDH11-213ENST00000567934 NSMFQ6X4W1 530 aa18.28■□□□□ 0.52
CDH11-213ENST00000567934 ADGRF4Q8IZF3 695 aa18.28■□□□□ 0.52
CDH11-213ENST00000567934 TMTC2Q8N394 836 aa18.28■□□□□ 0.52
CDH11-213ENST00000567934 IGDCC4Q8TDY8 1250 aa18.28■□□□□ 0.52
CDH11-213ENST00000567934 SHISA4Q96DD7 197 aa18.28■□□□□ 0.52
CDH11-213ENST00000567934 NEK1Q96PY6 1258 aa18.28■□□□□ 0.52
CDH11-213ENST00000567934 SENP2Q9HC62 589 aa18.28■□□□□ 0.52
CDH11-213ENST00000567934 FRMPD3Q5JV73 1810 aa18.28■□□□□ 0.52
CDH11-213ENST00000567934 FARP2O94887 1054 aaPredicted RBP18.27■□□□□ 0.52
CDH11-213ENST00000567934 TAL1P17542 331 aaPredicted RBP18.27■□□□□ 0.52
CDH11-213ENST00000567934 CDC37Q16543 378 aaPredicted RBP18.27■□□□□ 0.52
CDH11-213ENST00000567934 USH1GQ495M9 461 aa18.27■□□□□ 0.52
CDH11-213ENST00000567934 MUM1L1Q5H9M0 696 aa18.27■□□□□ 0.52
CDH11-213ENST00000567934 STAG2Q8N3U4 1231 aa18.27■□□□□ 0.52
CDH11-213ENST00000567934 TINF2Q9BSI4 451 aa18.27■□□□□ 0.52
CDH11-213ENST00000567934 MTA3Q9BTC8 594 aa18.27■□□□□ 0.52
CDH11-213ENST00000567934 PFASO15067 1338 aa18.26■□□□□ 0.51
CDH11-213ENST00000567934 DNAJC25-GNG10A0A024R161 153 aa18.26■□□□□ 0.51
CDH11-213ENST00000567934 MSCO60682 206 aa18.26■□□□□ 0.51
CDH11-213ENST00000567934 GRM4Q14833 912 aa18.26■□□□□ 0.51
CDH11-213ENST00000567934 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.26■□□□□ 0.51
CDH11-213ENST00000567934 LRRC2Q9BYS8 371 aa18.26■□□□□ 0.51
CDH11-213ENST00000567934 CRISPLD2Q9H0B8 497 aa18.26■□□□□ 0.51
CDH11-213ENST00000567934 LY9Q9HBG7 655 aa18.26■□□□□ 0.51
CDH11-213ENST00000567934 A1CFQ9NQ94 594 aaKnown RBP18.26■□□□□ 0.51
CDH11-213ENST00000567934 DDX20Q9UHI6 824 aaKnown RBP18.26■□□□□ 0.51
CDH11-213ENST00000567934 CNPY2Q9Y2B0 182 aa18.26■□□□□ 0.51
CDH11-213ENST00000567934 PTPDC1A2A3K4 754 aa18.25■□□□□ 0.51
CDH11-213ENST00000567934 CYBAP13498 195 aa18.25■□□□□ 0.51
CDH11-213ENST00000567934 CNTN2Q02246 1040 aa18.25■□□□□ 0.51
CDH11-213ENST00000567934 RASEFQ8IZ41 740 aa18.25■□□□□ 0.51
CDH11-213ENST00000567934 ZNF654Q8IZM8 581 aa18.25■□□□□ 0.51
CDH11-213ENST00000567934 TRPV1Q8NER1 839 aa18.25■□□□□ 0.51
CDH11-213ENST00000567934 CTCFLQ8NI51 663 aaPredicted RBP18.25■□□□□ 0.51
CDH11-213ENST00000567934 GPHNQ9NQX3 736 aaPredicted RBP18.25■□□□□ 0.51
CDH11-213ENST00000567934 MAD2L2Q9UI95 211 aa18.25■□□□□ 0.51
CDH11-213ENST00000567934 WDR19Q8NEZ3 1342 aa18.24■□□□□ 0.51
CDH11-213ENST00000567934 PALM3A6NDB9 673 aaPredicted RBP18.24■□□□□ 0.51
CDH11-213ENST00000567934 SH2B2O14492 632 aaPredicted RBP18.24■□□□□ 0.51
CDH11-213ENST00000567934 MYCNP04198 464 aaPredicted RBP18.24■□□□□ 0.51
CDH11-213ENST00000567934 FGD1P98174 961 aa18.24■□□□□ 0.51
CDH11-213ENST00000567934 TSGA10IPQ3SY00 556 aa18.24■□□□□ 0.51
CDH11-213ENST00000567934 ANO1Q5XXA6 986 aa18.24■□□□□ 0.51
CDH11-213ENST00000567934 SYNE3Q6ZMZ3 975 aa18.24■□□□□ 0.51
CDH11-213ENST00000567934 ZNF467Q7Z7K2 595 aaPredicted RBP18.24■□□□□ 0.51
CDH11-213ENST00000567934 FBXO11Q86XK2 927 aa18.24■□□□□ 0.51
CDH11-213ENST00000567934 MSL3Q8N5Y2 521 aaKnown RBP18.24■□□□□ 0.51
CDH11-213ENST00000567934 MYL10Q9BUA6 226 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms