RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 STXBP3O00186 592 aa14.75□□□□□ -0.05
CLK3-214ENST00000564096 ZBED4O75132 1171 aa14.75□□□□□ -0.05
CLK3-214ENST00000564096 GNA11P29992 359 aa14.75□□□□□ -0.05
CLK3-214ENST00000564096 KRT2P35908 639 aa14.75□□□□□ -0.05
CLK3-214ENST00000564096 NLRP5P59047 1200 aa14.75□□□□□ -0.05
CLK3-214ENST00000564096 GUCY1B3Q02153 619 aa14.75□□□□□ -0.05
CLK3-214ENST00000564096 PKP1Q13835 747 aa14.75□□□□□ -0.05
CLK3-214ENST00000564096 SAMD1Q6SPF0 538 aaPredicted RBP14.75□□□□□ -0.05
CLK3-214ENST00000564096 BRAPQ7Z569 592 aa14.75□□□□□ -0.05
CLK3-214ENST00000564096 FBXO11Q86XK2 927 aa14.75□□□□□ -0.05
CLK3-214ENST00000564096 TEX2Q8IWB9 1127 aa14.75□□□□□ -0.05
CLK3-214ENST00000564096 BICD2Q8TD16 824 aa14.75□□□□□ -0.05
CLK3-214ENST00000564096 GBP4Q96PP9 640 aa14.75□□□□□ -0.05
CLK3-214ENST00000564096 C6orf50Q9HD87 102 aa14.75□□□□□ -0.05
CLK3-214ENST00000564096 ABT1Q9ULW3 272 aaKnown RBP14.75□□□□□ -0.05
CLK3-214ENST00000564096 TLL2Q9Y6L7 1015 aa14.75□□□□□ -0.05
CLK3-214ENST00000564096 TMEM88BA6NKF7 163 aa14.74□□□□□ -0.05
CLK3-214ENST00000564096 OSBPP22059 807 aa14.74□□□□□ -0.05
CLK3-214ENST00000564096 ZNF157P51786 506 aaPredicted RBP14.74□□□□□ -0.05
CLK3-214ENST00000564096 DGKZQ13574 1117 aa14.74□□□□□ -0.05
CLK3-214ENST00000564096 SPRYD7Q5W111 196 aa14.74□□□□□ -0.05
CLK3-214ENST00000564096 CATSPERGQ6ZRH7 1159 aa14.74□□□□□ -0.05
CLK3-214ENST00000564096 SAPCD2Q86UD0 394 aa14.74□□□□□ -0.05
CLK3-214ENST00000564096 GTF3C2Q8WUA4 911 aaPredicted RBP14.74□□□□□ -0.05
CLK3-214ENST00000564096 PHF20Q9BVI0 1012 aa14.74□□□□□ -0.05
CLK3-214ENST00000564096 ABCB11O95342 1321 aa14.73□□□□□ -0.05
CLK3-214ENST00000564096 HOXA7P31268 230 aaPredicted RBP14.73□□□□□ -0.05
CLK3-214ENST00000564096 ADCY7P51828 1080 aa14.73□□□□□ -0.05
CLK3-214ENST00000564096 OAZ1P54368 228 aa14.73□□□□□ -0.05
CLK3-214ENST00000564096 KIF23Q02241 960 aaPredicted RBP14.73□□□□□ -0.05
CLK3-214ENST00000564096 COG2Q14746 738 aa14.73□□□□□ -0.05
CLK3-214ENST00000564096 FOXD4L5Q5VV16 416 aaPredicted RBP14.73□□□□□ -0.05
CLK3-214ENST00000564096 RGMBQ6NW40 437 aa14.73□□□□□ -0.05
CLK3-214ENST00000564096 CCDC174Q6PII3 467 aa14.73□□□□□ -0.05
CLK3-214ENST00000564096 RASAL3Q86YV0 1011 aa14.73□□□□□ -0.05
CLK3-214ENST00000564096 DIS3L2Q8IYB7 885 aaKnown RBP14.73□□□□□ -0.05
CLK3-214ENST00000564096 MB21D1Q8N884 522 aa14.73□□□□□ -0.05
CLK3-214ENST00000564096 DAGLBQ8NCG7 672 aa14.73□□□□□ -0.05
CLK3-214ENST00000564096 FOXD4L4Q8WXT5 416 aaPredicted RBP14.73□□□□□ -0.05
CLK3-214ENST00000564096 HHIPL1Q96JK4 782 aa14.73□□□□□ -0.05
CLK3-214ENST00000564096 FOXP1Q9H334 677 aaPredicted RBP14.73□□□□□ -0.05
CLK3-214ENST00000564096 FBXO28Q9NVF7 368 aa14.73□□□□□ -0.05
CLK3-214ENST00000564096 HOXC10Q9NYD6 342 aa14.73□□□□□ -0.05
CLK3-214ENST00000564096 PCDHA4Q9UN74 947 aa14.73□□□□□ -0.05
CLK3-214ENST00000564096 SLC45A1Q9Y2W3 748 aa14.73□□□□□ -0.05
CLK3-214ENST00000564096 PCDHA1Q9Y5I3 950 aa14.73□□□□□ -0.05
CLK3-214ENST00000564096 CCL15-CCL14A0A0B4J2E2 113 aa14.72□□□□□ -0.05
CLK3-214ENST00000564096 ICAM1P05362 532 aa14.72□□□□□ -0.05
CLK3-214ENST00000564096 DSG3P32926 999 aa14.72□□□□□ -0.05
CLK3-214ENST00000564096 GJA5P36382 358 aa14.72□□□□□ -0.05
CLK3-214ENST00000564096 RESTQ13127 1097 aa14.72□□□□□ -0.05
CLK3-214ENST00000564096 CCL15Q16663 113 aa14.72□□□□□ -0.05
CLK3-214ENST00000564096 TREML2Q5T2D2 321 aa14.72□□□□□ -0.05
CLK3-214ENST00000564096 OTUD7BQ6GQQ9 843 aa14.72□□□□□ -0.05
CLK3-214ENST00000564096 FERMT3Q86UX7 667 aa14.72□□□□□ -0.05
CLK3-214ENST00000564096 TNPO1Q92973 898 aaKnown RBP14.72□□□□□ -0.05
CLK3-214ENST00000564096 CUL5Q93034 780 aa14.72□□□□□ -0.05
CLK3-214ENST00000564096 CCDC102AQ96A19 550 aa14.72□□□□□ -0.05
CLK3-214ENST00000564096 ZMYND12Q9H0C1 365 aa14.72□□□□□ -0.05
CLK3-214ENST00000564096 SLC38A10Q9HBR0 1119 aa14.72□□□□□ -0.05
CLK3-214ENST00000564096 CCPG1Q9ULG6 757 aa14.72□□□□□ -0.05
CLK3-214ENST00000564096 KCNJ14Q9UNX9 436 aa14.72□□□□□ -0.05
CLK3-214ENST00000564096 MYH6P13533 1939 aa14.72□□□□□ -0.05
CLK3-214ENST00000564096 PTPRFP10586 1907 aa14.71□□□□□ -0.05
CLK3-214ENST00000564096 SMCO2A6NFE2 343 aa14.71□□□□□ -0.05
CLK3-214ENST00000564096 MANSC4A6NHS7 340 aaPredicted RBP14.71□□□□□ -0.05
CLK3-214ENST00000564096 SPDYE16A6NNV3 312 aaPredicted RBP14.71□□□□□ -0.05
CLK3-214ENST00000564096 VWA5AO00534 786 aa14.71□□□□□ -0.05
CLK3-214ENST00000564096 SLC10A3P09131 477 aa14.71□□□□□ -0.05
CLK3-214ENST00000564096 MKRN3Q13064 507 aaKnown RBP14.71□□□□□ -0.05
CLK3-214ENST00000564096 USH1GQ495M9 461 aa14.71□□□□□ -0.05
CLK3-214ENST00000564096 NOSTRINQ8IVI9 506 aa14.71□□□□□ -0.05
CLK3-214ENST00000564096 BLIDQ8IZY5 108 aa14.71□□□□□ -0.05
CLK3-214ENST00000564096 REXO1Q8N1G1 1221 aaKnown RBP14.71□□□□□ -0.05
CLK3-214ENST00000564096 ATG4CQ96DT6 458 aa14.71□□□□□ -0.05
CLK3-214ENST00000564096 NOL7Q9UMY1 257 aaKnown RBP14.71□□□□□ -0.05
CLK3-214ENST00000564096 ZDHHC9Q9Y397 364 aa14.71□□□□□ -0.05
CLK3-214ENST00000564096 MRPL11Q9Y3B7 192 aaKnown RBP14.71□□□□□ -0.05
CLK3-214ENST00000564096 GOLGA6L22H0YM25 854 aa14.7□□□□□ -0.06
CLK3-214ENST00000564096 PPP1R11O60927 126 aaPredicted RBP14.7□□□□□ -0.06
CLK3-214ENST00000564096 U2AF2P26368 475 aaKnown RBP eCLIP14.7□□□□□ -0.063e-6■■□□□ 13
CLK3-214ENST00000564096 MRPL12P52815 198 aaKnown RBP14.7□□□□□ -0.06
CLK3-214ENST00000564096 CSPP1Q1MSJ5 1256 aa14.7□□□□□ -0.06
CLK3-214ENST00000564096 MCTP2Q6DN12 878 aa14.7□□□□□ -0.06
CLK3-214ENST00000564096 PAXIP1Q6ZW49 1069 aaPredicted RBP14.7□□□□□ -0.06
CLK3-214ENST00000564096 ANKRD23Q86SG2 305 aa14.7□□□□□ -0.06
CLK3-214ENST00000564096 COA7Q96BR5 231 aa14.7□□□□□ -0.06
CLK3-214ENST00000564096 ZNF396Q96N95 335 aaPredicted RBP14.7□□□□□ -0.06
CLK3-214ENST00000564096 PARK7Q99497 189 aaKnown RBP14.7□□□□□ -0.06
CLK3-214ENST00000564096 TEX13BQ9BXU2 312 aa14.7□□□□□ -0.06
CLK3-214ENST00000564096 RIC8AQ9NPQ8 531 aa14.7□□□□□ -0.06
CLK3-214ENST00000564096 GJB4Q9NTQ9 266 aa14.7□□□□□ -0.06
CLK3-214ENST00000564096 CCDC194A0A1B0GVG4 234 aa14.69□□□□□ -0.06
CLK3-214ENST00000564096 ATP2A1O14983 1001 aa14.69□□□□□ -0.06
CLK3-214ENST00000564096 COPB2P35606 906 aa14.69□□□□□ -0.06
CLK3-214ENST00000564096 SNAP25P60880 206 aa14.69□□□□□ -0.06
CLK3-214ENST00000564096 KRT85P78386 507 aa14.69□□□□□ -0.06
CLK3-214ENST00000564096 SREBF2Q12772 1141 aa14.69□□□□□ -0.06
CLK3-214ENST00000564096 TKFCQ3LXA3 575 aa14.69□□□□□ -0.06
CLK3-214ENST00000564096 ATL3Q6DD88 541 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms