RNA–Protein interactions for RNA: ENST00000562411.5

SNAPC5-204, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 3

Gene SNAPC5, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-204ENST00000562411 PGK2P07205 417 aa12.8□□□□□ -0.36
SNAPC5-204ENST00000562411 PARP1P09874 1014 aaKnown RBP12.8□□□□□ -0.36
SNAPC5-204ENST00000562411 ALAS1P13196 640 aa12.8□□□□□ -0.36
SNAPC5-204ENST00000562411 BTNL9Q6UXG8 535 aa12.8□□□□□ -0.36
SNAPC5-204ENST00000562411 ABRAQ8N0Z2 381 aa12.8□□□□□ -0.36
SNAPC5-204ENST00000562411 AGBL1Q96MI9 1066 aa12.8□□□□□ -0.36
SNAPC5-204ENST00000562411 RANBP17Q9H2T7 1088 aaKnown RBP12.8□□□□□ -0.36
SNAPC5-204ENST00000562411 MCM3APO60318 1980 aa12.8□□□□□ -0.36
SNAPC5-204ENST00000562411 KIAA0100Q14667 2235 aaKnown RBP12.79□□□□□ -0.36
SNAPC5-204ENST00000562411 COBLO75128 1261 aa12.79□□□□□ -0.36
SNAPC5-204ENST00000562411 HOXC6P09630 235 aa12.79□□□□□ -0.36
SNAPC5-204ENST00000562411 MCM5P33992 734 aa12.79□□□□□ -0.36
SNAPC5-204ENST00000562411 PIAS4Q8N2W9 510 aaPredicted RBP12.79□□□□□ -0.36
SNAPC5-204ENST00000562411 LRRC2Q9BYS8 371 aa12.79□□□□□ -0.36
SNAPC5-204ENST00000562411 ACAD9Q9H845 621 aa12.79□□□□□ -0.36
SNAPC5-204ENST00000562411 LY9Q9HBG7 655 aa12.79□□□□□ -0.36
SNAPC5-204ENST00000562411 GPHNQ9NQX3 736 aaPredicted RBP12.79□□□□□ -0.36
SNAPC5-204ENST00000562411 SLC5A4Q9NY91 659 aa12.79□□□□□ -0.36
SNAPC5-204ENST00000562411 FBXO40Q9UH90 709 aa12.79□□□□□ -0.36
SNAPC5-204ENST00000562411 SMCHD1A6NHR9 2005 aa12.79□□□□□ -0.36
SNAPC5-204ENST00000562411 SH2B2O14492 632 aaPredicted RBP12.78□□□□□ -0.36
SNAPC5-204ENST00000562411 ICAM1P05362 532 aa12.78□□□□□ -0.36
SNAPC5-204ENST00000562411 EN2P19622 333 aaPredicted RBP12.78□□□□□ -0.36
SNAPC5-204ENST00000562411 CYP2C19P33261 490 aa12.78□□□□□ -0.36
SNAPC5-204ENST00000562411 CACNB2Q08289 660 aaPredicted RBP12.78□□□□□ -0.36
SNAPC5-204ENST00000562411 GRM4Q14833 912 aa12.78□□□□□ -0.36
SNAPC5-204ENST00000562411 CDC37Q16543 378 aaPredicted RBP12.78□□□□□ -0.36
SNAPC5-204ENST00000562411 MFSD14CQ5VZR4 134 aa12.78□□□□□ -0.36
SNAPC5-204ENST00000562411 NFXL1Q6ZNB6 911 aa12.78□□□□□ -0.36
SNAPC5-204ENST00000562411 RASEFQ8IZ41 740 aa12.78□□□□□ -0.36
SNAPC5-204ENST00000562411 ANKRD35Q8N283 1001 aa12.78□□□□□ -0.36
SNAPC5-204ENST00000562411 CHST13Q8NET6 341 aa12.78□□□□□ -0.36
SNAPC5-204ENST00000562411 SHISA4Q96DD7 197 aa12.78□□□□□ -0.36
SNAPC5-204ENST00000562411 MAML3Q96JK9 1138 aa12.78□□□□□ -0.36
SNAPC5-204ENST00000562411 TCEANC2Q96MN5 208 aa12.78□□□□□ -0.36
SNAPC5-204ENST00000562411 DEFB118Q96PH6 123 aa12.78□□□□□ -0.36
SNAPC5-204ENST00000562411 MYL10Q9BUA6 226 aa12.78□□□□□ -0.36
SNAPC5-204ENST00000562411 UBA5Q9GZZ9 404 aa12.78□□□□□ -0.36
SNAPC5-204ENST00000562411 CCDC69A6NI79 296 aa12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 CCND3P30281 292 aaPredicted RBP12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 MLLT1Q03111 559 aaPredicted RBP12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 KRT32Q14532 448 aa12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 TKFCQ3LXA3 575 aa12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 ADCK5Q3MIX3 580 aa12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 USH1GQ495M9 461 aa12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 MUM1L1Q5H9M0 696 aa12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 MAP3K21Q5TCX8 1036 aa12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 OLFML2BQ68BL8 750 aa12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 CATIPQ7Z7H3 387 aa12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 ZNF654Q8IZM8 581 aa12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 STAG2Q8N3U4 1231 aa12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 NUP133Q8WUM0 1156 aa12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 DDX11Q96FC9 970 aa12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 TMEM87BQ96K49 555 aa12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 TRERF1Q96PN7 1200 aa12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 NEK1Q96PY6 1258 aa12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 HMX1Q9NP08 348 aaPredicted RBP12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 A1CFQ9NQ94 594 aaKnown RBP12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 PAK6Q9NQU5 681 aaPredicted RBP12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 RPTORQ8N122 1335 aa12.77□□□□□ -0.37
SNAPC5-204ENST00000562411 DDAH1O94760 285 aa12.76□□□□□ -0.37
SNAPC5-204ENST00000562411 GJB1P08034 283 aa12.76□□□□□ -0.37
SNAPC5-204ENST00000562411 HSPA4P34932 840 aa12.76□□□□□ -0.37
SNAPC5-204ENST00000562411 NSMFQ6X4W1 530 aa12.76□□□□□ -0.37
SNAPC5-204ENST00000562411 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.76□□□□□ -0.37
SNAPC5-204ENST00000562411 RAB11FIP4Q86YS3 637 aa12.76□□□□□ -0.37
SNAPC5-204ENST00000562411 ADGRF4Q8IZF3 695 aa12.76□□□□□ -0.37
SNAPC5-204ENST00000562411 IGDCC4Q8TDY8 1250 aa12.76□□□□□ -0.37
SNAPC5-204ENST00000562411 U2AF1L4Q8WU68 220 aaKnown RBP12.76□□□□□ -0.37
SNAPC5-204ENST00000562411 JAKMIP1Q96N16 626 aaKnown RBP12.76□□□□□ -0.37
SNAPC5-204ENST00000562411 MAD2L2Q9UI95 211 aa12.76□□□□□ -0.37
SNAPC5-204ENST00000562411 SNX14Q9Y5W7 946 aa12.76□□□□□ -0.37
SNAPC5-204ENST00000562411 PFASO15067 1338 aa12.76□□□□□ -0.37
SNAPC5-204ENST00000562411 WDR19Q8NEZ3 1342 aa12.76□□□□□ -0.37
SNAPC5-204ENST00000562411 KLRF2D3W0D1 207 aa12.75□□□□□ -0.37
SNAPC5-204ENST00000562411 NFIBO00712 420 aa12.75□□□□□ -0.37
SNAPC5-204ENST00000562411 CYBAP13498 195 aa12.75□□□□□ -0.37
SNAPC5-204ENST00000562411 CPA1P15085 419 aa12.75□□□□□ -0.37
SNAPC5-204ENST00000562411 RXRAP19793 462 aa12.75□□□□□ -0.37
SNAPC5-204ENST00000562411 CNGA1P29973 690 aa12.75□□□□□ -0.37
SNAPC5-204ENST00000562411 GJA8P48165 433 aa12.75□□□□□ -0.37
SNAPC5-204ENST00000562411 QRICH1Q2TAL8 776 aa12.75□□□□□ -0.37
SNAPC5-204ENST00000562411 ZNF792Q3KQV3 632 aa12.75□□□□□ -0.37
SNAPC5-204ENST00000562411 MICU3Q86XE3 530 aa12.75□□□□□ -0.37
SNAPC5-204ENST00000562411 HOMER1Q86YM7 354 aa12.75□□□□□ -0.37
SNAPC5-204ENST00000562411 CTCFLQ8NI51 663 aaPredicted RBP12.75□□□□□ -0.37
SNAPC5-204ENST00000562411 MTA3Q9BTC8 594 aa12.75□□□□□ -0.37
SNAPC5-204ENST00000562411 VAT1LQ9HCJ6 419 aa12.75□□□□□ -0.37
SNAPC5-204ENST00000562411 TNRC18O15417 2968 aaPredicted RBP12.75□□□□□ -0.37
SNAPC5-204ENST00000562411 DNAJC25-GNG10A0A024R161 153 aa12.74□□□□□ -0.37
SNAPC5-204ENST00000562411 PTPDC1A2A3K4 754 aa12.74□□□□□ -0.37
SNAPC5-204ENST00000562411 PALM3A6NDB9 673 aaPredicted RBP12.74□□□□□ -0.37
SNAPC5-204ENST00000562411 POTEB2H3BUK9 544 aa12.74□□□□□ -0.37
SNAPC5-204ENST00000562411 FARP2O94887 1054 aaPredicted RBP12.74□□□□□ -0.37
SNAPC5-204ENST00000562411 RGS19P49795 217 aa12.74□□□□□ -0.37
SNAPC5-204ENST00000562411 CNTN2Q02246 1040 aa12.74□□□□□ -0.37
SNAPC5-204ENST00000562411 TROAPQ12815 778 aa12.74□□□□□ -0.37
SNAPC5-204ENST00000562411 SLC30A10Q6XR72 485 aa12.74□□□□□ -0.37
SNAPC5-204ENST00000562411 CCDC144CPQ8IYA2 1237 aa12.74□□□□□ -0.37
SNAPC5-204ENST00000562411 TRPV1Q8NER1 839 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms