RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 CCSER1Q9C0I3 900 aa21.64■■□□□ 1.06
HMBOX1-215ENST00000560599 HSD3B7Q9H2F3 369 aa21.64■■□□□ 1.06
HMBOX1-215ENST00000560599 DNAJC18Q9H819 358 aa21.64■■□□□ 1.06
HMBOX1-215ENST00000560599 KANSL2Q9H9L4 492 aa21.64■■□□□ 1.06
HMBOX1-215ENST00000560599 TMOD2Q9NZR1 351 aa21.64■■□□□ 1.06
HMBOX1-215ENST00000560599 ARFGEF1Q9Y6D6 1849 aa21.64■■□□□ 1.05
HMBOX1-215ENST00000560599 C21orf2O43822 256 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 CACNB3P54284 484 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 ATP2B2Q01814 1243 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 TCP10Q12799 353 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 LRMPQ12912 555 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 TATDN1Q6P1N9 297 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 TMC6Q7Z403 805 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 FILIP1Q7Z7B0 1213 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 MKL1Q969V6 931 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 GLT8D2Q9H1C3 349 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 VPS33BQ9H267 617 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 DISC1Q9NRI5 854 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 KIF13BQ9NQT8 1826 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 SYNRGQ9UMZ2 1314 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 DDTLA6NHG4 134 aaPredicted RBP21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 MYL1P05976 194 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 SEMA3FQ13275 785 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 MTMR8Q96EF0 704 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 TMEM60Q9H2L4 133 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 CUEDC2Q9H467 287 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 JMJD4Q9H9V9 463 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 HDAC9Q9UKV0 1011 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 R3HCC1Q9Y3T6 440 aaKnown RBP21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 PCDHAC2Q9Y5I4 1007 aa21.63■■□□□ 1.05
HMBOX1-215ENST00000560599 YDJCA8MPS7 323 aa21.62■■□□□ 1.05
HMBOX1-215ENST00000560599 UBASH3AP57075 661 aa21.62■■□□□ 1.05
HMBOX1-215ENST00000560599 LETM2Q2VYF4 491 aa21.62■■□□□ 1.05
HMBOX1-215ENST00000560599 RSBN1LQ6PCB5 846 aaPredicted RBP21.62■■□□□ 1.05
HMBOX1-215ENST00000560599 SH3BP5LQ7L8J4 393 aa21.62■■□□□ 1.05
HMBOX1-215ENST00000560599 ADGRF4Q8IZF3 695 aa21.62■■□□□ 1.05
HMBOX1-215ENST00000560599 C17orf53Q8N3J3 647 aaPredicted RBP21.62■■□□□ 1.05
HMBOX1-215ENST00000560599 RIC8AQ9NPQ8 531 aa21.62■■□□□ 1.05
HMBOX1-215ENST00000560599 FANCLQ9NW38 375 aa21.62■■□□□ 1.05
HMBOX1-215ENST00000560599 NFE2L3Q9Y4A8 694 aa21.62■■□□□ 1.05
HMBOX1-215ENST00000560599 CCNT1O60563 726 aaKnown RBP21.61■■□□□ 1.05
HMBOX1-215ENST00000560599 ATP1A3P13637 1013 aa21.61■■□□□ 1.05
HMBOX1-215ENST00000560599 UBA7P41226 1012 aa21.61■■□□□ 1.05
HMBOX1-215ENST00000560599 ICA1Q05084 483 aa21.61■■□□□ 1.05
HMBOX1-215ENST00000560599 FMR1Q06787 632 aaKnown RBP eCLIP21.61■■□□□ 1.05
HMBOX1-215ENST00000560599 RRAGBQ5VZM2 374 aa21.61■■□□□ 1.05
HMBOX1-215ENST00000560599 RASSF8Q8NHQ8 419 aa21.61■■□□□ 1.05
HMBOX1-215ENST00000560599 SYNPO2Q9UMS6 1093 aa21.61■■□□□ 1.05
HMBOX1-215ENST00000560599 ZBTB5O15062 677 aa21.6■■□□□ 1.05
HMBOX1-215ENST00000560599 ZNF18P17022 549 aa21.6■■□□□ 1.05
HMBOX1-215ENST00000560599 ABCB5Q2M3G0 1257 aa21.6■■□□□ 1.05
HMBOX1-215ENST00000560599 JAKMIP3Q5VZ66 844 aa21.6■■□□□ 1.05
HMBOX1-215ENST00000560599 SLFN13Q68D06 897 aa21.6■■□□□ 1.05
HMBOX1-215ENST00000560599 TBCKQ8TEA7 893 aa21.6■■□□□ 1.05
HMBOX1-215ENST00000560599 CUL5Q93034 780 aa21.6■■□□□ 1.05
HMBOX1-215ENST00000560599 NAP1L4Q99733 375 aaKnown RBP21.6■■□□□ 1.05
HMBOX1-215ENST00000560599 TDRD3Q9H7E2 651 aaKnown RBP21.6■■□□□ 1.05
HMBOX1-215ENST00000560599 EEF2P13639 858 aaKnown RBP21.59■■□□□ 1.05
HMBOX1-215ENST00000560599 SFPQP23246 707 aaKnown RBP eCLIP21.59■■□□□ 1.05
HMBOX1-215ENST00000560599 KARSQ15046 597 aaKnown RBP21.59■■□□□ 1.05
HMBOX1-215ENST00000560599 SPATA1Q5VX52 437 aa21.59■■□□□ 1.05
HMBOX1-215ENST00000560599 GMCL1P1Q8NEA9 526 aa21.59■■□□□ 1.05
HMBOX1-215ENST00000560599 COA7Q96BR5 231 aa21.59■■□□□ 1.05
HMBOX1-215ENST00000560599 BIN2Q9UBW5 565 aaPredicted RBP21.59■■□□□ 1.05
HMBOX1-215ENST00000560599 HERC5Q9UII4 1024 aaKnown RBP21.59■■□□□ 1.05
HMBOX1-215ENST00000560599 MRPL12P52815 198 aaKnown RBP21.58■■□□□ 1.05
HMBOX1-215ENST00000560599 CCZ1BP86790 482 aa21.58■■□□□ 1.05
HMBOX1-215ENST00000560599 CCZ1P86791 482 aaPredicted RBP21.58■■□□□ 1.05
HMBOX1-215ENST00000560599 CUL4BQ13620 913 aa21.58■■□□□ 1.05
HMBOX1-215ENST00000560599 CABP7Q86V35 215 aa21.58■■□□□ 1.05
HMBOX1-215ENST00000560599 VSTM4Q8IW00 320 aa21.58■■□□□ 1.05
HMBOX1-215ENST00000560599 LARGE2Q8N3Y3 721 aa21.58■■□□□ 1.05
HMBOX1-215ENST00000560599 PRIMPOLQ96LW4 560 aa21.58■■□□□ 1.05
HMBOX1-215ENST00000560599 RPN1P04843 607 aaKnown RBP21.57■■□□□ 1.04
HMBOX1-215ENST00000560599 SKILP12757 684 aa21.57■■□□□ 1.04
HMBOX1-215ENST00000560599 CDK11BP21127 795 aaKnown RBP21.57■■□□□ 1.04
HMBOX1-215ENST00000560599 SLC1A4P43007 532 aa21.57■■□□□ 1.04
HMBOX1-215ENST00000560599 KCNJ6P48051 423 aa21.57■■□□□ 1.04
HMBOX1-215ENST00000560599 TMEM266Q2M3C6 531 aa21.57■■□□□ 1.04
HMBOX1-215ENST00000560599 RBM26Q5T8P6 1007 aaKnown RBP21.57■■□□□ 1.04
HMBOX1-215ENST00000560599 TTBK2Q6IQ55 1244 aa21.57■■□□□ 1.04
HMBOX1-215ENST00000560599 KCTD1Q719H9 257 aa21.57■■□□□ 1.04
HMBOX1-215ENST00000560599 TRMT44Q8IYL2 757 aaKnown RBP21.57■■□□□ 1.04
HMBOX1-215ENST00000560599 GMCL1Q96IK5 515 aa21.57■■□□□ 1.04
HMBOX1-215ENST00000560599 GTPBP4Q9BZE4 634 aaKnown RBP21.57■■□□□ 1.04
HMBOX1-215ENST00000560599 TMEM260Q9NX78 707 aa21.57■■□□□ 1.04
HMBOX1-215ENST00000560599 SPDYE2BA6NHP3 402 aa21.56■■□□□ 1.04
HMBOX1-215ENST00000560599 FAM196BA6NMK8 535 aa21.56■■□□□ 1.04
HMBOX1-215ENST00000560599 VIL1P09327 827 aaKnown RBP21.56■■□□□ 1.04
HMBOX1-215ENST00000560599 SPDYE6P0CI01 402 aa21.56■■□□□ 1.04
HMBOX1-215ENST00000560599 DPEP1P16444 411 aa21.56■■□□□ 1.04
HMBOX1-215ENST00000560599 KCNB1Q14721 858 aa21.56■■□□□ 1.04
HMBOX1-215ENST00000560599 SEPT2Q15019 361 aa21.56■■□□□ 1.04
HMBOX1-215ENST00000560599 CALCRLQ16602 461 aa21.56■■□□□ 1.04
HMBOX1-215ENST00000560599 ZNF658Q5TYW1 1059 aaPredicted RBP21.56■■□□□ 1.04
HMBOX1-215ENST00000560599 MCTP2Q6DN12 878 aa21.56■■□□□ 1.04
HMBOX1-215ENST00000560599 CCDC112Q8NEF3 446 aa21.56■■□□□ 1.04
HMBOX1-215ENST00000560599 CCDC47Q96A33 483 aaKnown RBP21.56■■□□□ 1.04
HMBOX1-215ENST00000560599 RAB34Q9BZG1 259 aa21.56■■□□□ 1.04
HMBOX1-215ENST00000560599 USP17L10C9JJH3 530 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms