RNA–Protein interactions for RNA: ENST00000558685.1

SHF-204, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-204ENST00000558685 NECTIN1Q15223 517 aa13.79□□□□□ -0.2
SHF-204ENST00000558685 CCDC178Q5BJE1 867 aa13.79□□□□□ -0.2
SHF-204ENST00000558685 SYDE2Q5VT97 1194 aa13.79□□□□□ -0.2
SHF-204ENST00000558685 MFSD14CQ5VZR4 134 aa13.79□□□□□ -0.2
SHF-204ENST00000558685 CCDC174Q6PII3 467 aa13.79□□□□□ -0.2
SHF-204ENST00000558685 MB21D2Q8IYB1 491 aaPredicted RBP13.79□□□□□ -0.2
SHF-204ENST00000558685 FGD4Q96M96 766 aa13.79□□□□□ -0.2
SHF-204ENST00000558685 RANBP17Q9H2T7 1088 aaKnown RBP13.79□□□□□ -0.2
SHF-204ENST00000558685 PPP4R2Q9NY27 417 aa13.79□□□□□ -0.2
SHF-204ENST00000558685 SLC27A2O14975 620 aa13.78□□□□□ -0.2
SHF-204ENST00000558685 CDC45O75419 566 aa13.78□□□□□ -0.2
SHF-204ENST00000558685 TFRCP02786 760 aaKnown RBP13.78□□□□□ -0.2
SHF-204ENST00000558685 CENPBP07199 599 aaPredicted RBP13.78□□□□□ -0.2
SHF-204ENST00000558685 MUM1L1Q5H9M0 696 aa13.78□□□□□ -0.2
SHF-204ENST00000558685 PRAMEF19Q5SWL8 479 aa13.78□□□□□ -0.2
SHF-204ENST00000558685 ERICH6BQ5W0A0 696 aa13.78□□□□□ -0.2
SHF-204ENST00000558685 KIAA1211Q6ZU35 1233 aa13.78□□□□□ -0.2
SHF-204ENST00000558685 CHST3Q7LGC8 479 aa13.78□□□□□ -0.2
SHF-204ENST00000558685 CHST13Q8NET6 341 aa13.78□□□□□ -0.2
SHF-204ENST00000558685 DIS3LQ8TF46 1054 aaKnown RBP13.78□□□□□ -0.2
SHF-204ENST00000558685 UBAC1Q9BSL1 405 aa13.78□□□□□ -0.2
SHF-204ENST00000558685 UBA5Q9GZZ9 404 aa13.78□□□□□ -0.2
SHF-204ENST00000558685 KAT14Q9H8E8 782 aa13.78□□□□□ -0.2
SHF-204ENST00000558685 ANO2Q9NQ90 1003 aa13.78□□□□□ -0.2
SHF-204ENST00000558685 HOMER2Q9NSB8 354 aa13.78□□□□□ -0.2
SHF-204ENST00000558685 OGDHLQ9ULD0 1010 aa13.78□□□□□ -0.2
SHF-204ENST00000558685 DIS3Q9Y2L1 958 aaKnown RBP13.78□□□□□ -0.2
SHF-204ENST00000558685 CTDP1Q9Y5B0 961 aaPredicted RBP13.78□□□□□ -0.2
SHF-204ENST00000558685 ICAM1P05362 532 aa13.77□□□□□ -0.21
SHF-204ENST00000558685 SLC35G1Q2M3R5 365 aa13.77□□□□□ -0.21
SHF-204ENST00000558685 CREB3L3Q68CJ9 461 aa13.77□□□□□ -0.21
SHF-204ENST00000558685 NCOA7Q8NI08 942 aa13.77□□□□□ -0.21
SHF-204ENST00000558685 IGDCC4Q8TDY8 1250 aa13.77□□□□□ -0.21
SHF-204ENST00000558685 A1CFQ9NQ94 594 aaKnown RBP13.77□□□□□ -0.21
SHF-204ENST00000558685 GPHNQ9NQX3 736 aaPredicted RBP13.77□□□□□ -0.21
SHF-204ENST00000558685 RNF146Q9NTX7 359 aa13.77□□□□□ -0.21
SHF-204ENST00000558685 FARP2O94887 1054 aaPredicted RBP13.76□□□□□ -0.21
SHF-204ENST00000558685 SNAI1O95863 264 aaPredicted RBP13.76□□□□□ -0.21
SHF-204ENST00000558685 ALAS1P13196 640 aa13.76□□□□□ -0.21
SHF-204ENST00000558685 CNTN2Q02246 1040 aa13.76□□□□□ -0.21
SHF-204ENST00000558685 TRDNQ13061 729 aa13.76□□□□□ -0.21
SHF-204ENST00000558685 GPATCH4Q5T3I0 446 aaKnown RBP13.76□□□□□ -0.21
SHF-204ENST00000558685 IFIT1BQ5T764 474 aaKnown RBP13.76□□□□□ -0.21
SHF-204ENST00000558685 STAG2Q8N3U4 1231 aa13.76□□□□□ -0.21
SHF-204ENST00000558685 DDX11Q96FC9 970 aa13.76□□□□□ -0.21
SHF-204ENST00000558685 TRERF1Q96PN7 1200 aa13.76□□□□□ -0.21
SHF-204ENST00000558685 TINF2Q9BSI4 451 aa13.76□□□□□ -0.21
SHF-204ENST00000558685 ACAD9Q9H845 621 aa13.76□□□□□ -0.21
SHF-204ENST00000558685 SLC5A4Q9NY91 659 aa13.76□□□□□ -0.21
SHF-204ENST00000558685 FBXO40Q9UH90 709 aa13.76□□□□□ -0.21
SHF-204ENST00000558685 ASTN1O14525 1302 aa13.75□□□□□ -0.21
SHF-204ENST00000558685 IFIT3O14879 490 aaKnown RBP13.75□□□□□ -0.21
SHF-204ENST00000558685 TKFCQ3LXA3 575 aa13.75□□□□□ -0.21
SHF-204ENST00000558685 RALYLQ86SE5 291 aaKnown RBP13.75□□□□□ -0.21
SHF-204ENST00000558685 RASEFQ8IZ41 740 aa13.75□□□□□ -0.21
SHF-204ENST00000558685 ANKRD35Q8N283 1001 aa13.75□□□□□ -0.21
SHF-204ENST00000558685 FAM133AQ8N9E0 248 aa13.75□□□□□ -0.21
SHF-204ENST00000558685 CLEC4DQ8WXI8 215 aa13.75□□□□□ -0.21
SHF-204ENST00000558685 PAWRQ96IZ0 340 aaKnown RBP13.75□□□□□ -0.21
SHF-204ENST00000558685 DDX20Q9UHI6 824 aaKnown RBP13.75□□□□□ -0.21
SHF-204ENST00000558685 CCPG1Q9ULG6 757 aa13.75□□□□□ -0.21
SHF-204ENST00000558685 SOWAHBA6NEL2 793 aa13.74□□□□□ -0.21
SHF-204ENST00000558685 NFIBO00712 420 aa13.74□□□□□ -0.21
SHF-204ENST00000558685 ZNF865P0CJ78 1059 aaPredicted RBP13.74□□□□□ -0.21
SHF-204ENST00000558685 CAPN2P17655 700 aa13.74□□□□□ -0.21
SHF-204ENST00000558685 CNGA1P29973 690 aa13.74□□□□□ -0.21
SHF-204ENST00000558685 TROAPQ12815 778 aa13.74□□□□□ -0.21
SHF-204ENST00000558685 ASPRV1Q53RT3 343 aa13.74□□□□□ -0.21
SHF-204ENST00000558685 MAMDC4Q6UXC1 1216 aa13.74□□□□□ -0.21
SHF-204ENST00000558685 ZNF467Q7Z7K2 595 aaPredicted RBP13.74□□□□□ -0.21
SHF-204ENST00000558685 ADGRF4Q8IZF3 695 aa13.74□□□□□ -0.21
SHF-204ENST00000558685 PURBQ96QR8 312 aaKnown RBP13.74□□□□□ -0.21
SHF-204ENST00000558685 CYP39A1Q9NYL5 469 aa13.74□□□□□ -0.21
SHF-204ENST00000558685 MAD2L2Q9UI95 211 aa13.74□□□□□ -0.21
SHF-204ENST00000558685 DDX49Q9Y6V7 483 aaKnown RBP13.74□□□□□ -0.21
SHF-204ENST00000558685 PLXNA1Q9UIW2 1896 aa13.74□□□□□ -0.21
SHF-204ENST00000558685 WDR19Q8NEZ3 1342 aa13.73□□□□□ -0.21
SHF-204ENST00000558685 PALM3A6NDB9 673 aaPredicted RBP13.73□□□□□ -0.21
SHF-204ENST00000558685 SEPT4O43236 478 aa13.73□□□□□ -0.21
SHF-204ENST00000558685 PARP1P09874 1014 aaKnown RBP13.73□□□□□ -0.21
SHF-204ENST00000558685 TMEM67Q5HYA8 995 aa13.73□□□□□ -0.21
SHF-204ENST00000558685 ANO1Q5XXA6 986 aa13.73□□□□□ -0.21
SHF-204ENST00000558685 ANKLE1Q8NAG6 615 aa13.73□□□□□ -0.21
SHF-204ENST00000558685 JMJD4Q9H9V9 463 aa13.73□□□□□ -0.21
SHF-204ENST00000558685 LY9Q9HBG7 655 aa13.73□□□□□ -0.21
SHF-204ENST00000558685 PFASO15067 1338 aa13.72□□□□□ -0.21
SHF-204ENST00000558685 SYNGAP1Q96PV0 1343 aa13.72□□□□□ -0.21
SHF-204ENST00000558685 POTEB2H3BUK9 544 aa13.72□□□□□ -0.21
SHF-204ENST00000558685 PRC1O43663 620 aa13.72□□□□□ -0.21
SHF-204ENST00000558685 COL6A1P12109 1028 aa13.72□□□□□ -0.21
SHF-204ENST00000558685 GRM4Q14833 912 aa13.72□□□□□ -0.21
SHF-204ENST00000558685 WTAPQ15007 396 aa13.72□□□□□ -0.21
SHF-204ENST00000558685 CDC37Q16543 378 aaPredicted RBP13.72□□□□□ -0.21
SHF-204ENST00000558685 ADCK5Q3MIX3 580 aa13.72□□□□□ -0.21
SHF-204ENST00000558685 TSGA10IPQ3SY00 556 aa13.72□□□□□ -0.21
SHF-204ENST00000558685 MSL3Q8N5Y2 521 aaKnown RBP13.72□□□□□ -0.21
SHF-204ENST00000558685 MTMR8Q96EF0 704 aa13.72□□□□□ -0.21
SHF-204ENST00000558685 KATNBL1Q9H079 304 aa13.72□□□□□ -0.21
SHF-204ENST00000558685 NRBP1Q9UHY1 535 aa13.72□□□□□ -0.21
SHF-204ENST00000558685 KLRF2D3W0D1 207 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms