RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 GSPT1P15170 499 aaKnown RBP14.05□□□□□ -0.16
HERC1-202ENST00000558324 SLC16A2P36021 539 aa14.05□□□□□ -0.16
HERC1-202ENST00000558324 NOVP48745 357 aa14.05□□□□□ -0.16
HERC1-202ENST00000558324 TTC22Q5TAA0 569 aa14.05□□□□□ -0.16
HERC1-202ENST00000558324 TTBK2Q6IQ55 1244 aa14.05□□□□□ -0.16
HERC1-202ENST00000558324 DCAF4Q8WV16 495 aa14.05□□□□□ -0.16
HERC1-202ENST00000558324 FERMT2Q96AC1 680 aa14.05□□□□□ -0.16
HERC1-202ENST00000558324 RNF41Q9H4P4 317 aaPredicted RBP14.05□□□□□ -0.16
HERC1-202ENST00000558324 ACAD9Q9H845 621 aa14.05□□□□□ -0.16
HERC1-202ENST00000558324 NRBP1Q9UHY1 535 aa14.05□□□□□ -0.16
HERC1-202ENST00000558324 ZNF536O15090 1300 aa14.05□□□□□ -0.16
HERC1-202ENST00000558324 CEP290O15078 2479 aa14.04□□□□□ -0.16
HERC1-202ENST00000558324 ZNFX1Q9P2E3 1918 aaKnown RBP14.04□□□□□ -0.16
HERC1-202ENST00000558324 PCP11498 1178 aaKnown RBP14.04□□□□□ -0.16
HERC1-202ENST00000558324 AKR1A1P14550 325 aa14.04□□□□□ -0.16
HERC1-202ENST00000558324 ADCYAP1R1P41586 468 aa14.04□□□□□ -0.16
HERC1-202ENST00000558324 MAGEA10P43363 369 aaPredicted RBP14.04□□□□□ -0.16
HERC1-202ENST00000558324 CNTN2Q02246 1040 aa14.04□□□□□ -0.16
HERC1-202ENST00000558324 LRRC41Q15345 812 aa14.04□□□□□ -0.16
HERC1-202ENST00000558324 ESR2Q92731 530 aa14.04□□□□□ -0.16
HERC1-202ENST00000558324 TRERF1Q96PN7 1200 aa14.04□□□□□ -0.16
HERC1-202ENST00000558324 IL25Q9H293 177 aa14.04□□□□□ -0.16
HERC1-202ENST00000558324 TCP11L1Q9NUJ3 509 aa14.04□□□□□ -0.16
HERC1-202ENST00000558324 CCPG1Q9ULG6 757 aa14.04□□□□□ -0.16
HERC1-202ENST00000558324 ATP11BQ9Y2G3 1177 aa14.04□□□□□ -0.16
HERC1-202ENST00000558324 B4E1Z4 1266 aa14.03□□□□□ -0.16
HERC1-202ENST00000558324 POTEB2H3BUK9 544 aa14.03□□□□□ -0.16
HERC1-202ENST00000558324 PLA2G6O60733 806 aa14.03□□□□□ -0.16
HERC1-202ENST00000558324 KDM4AO75164 1064 aa14.03□□□□□ -0.16
HERC1-202ENST00000558324 SNAI1O95863 264 aaPredicted RBP14.03□□□□□ -0.16
HERC1-202ENST00000558324 RTP1P59025 263 aa14.03□□□□□ -0.16
HERC1-202ENST00000558324 MUM1L1Q5H9M0 696 aa14.03□□□□□ -0.16
HERC1-202ENST00000558324 MSL3Q8N5Y2 521 aaKnown RBP14.03□□□□□ -0.16
HERC1-202ENST00000558324 FGD4Q96M96 766 aa14.03□□□□□ -0.16
HERC1-202ENST00000558324 GDF15Q99988 308 aa14.03□□□□□ -0.16
HERC1-202ENST00000558324 A1CFQ9NQ94 594 aaKnown RBP14.03□□□□□ -0.16
HERC1-202ENST00000558324 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.03□□□□□ -0.16
HERC1-202ENST00000558324 SYNGAP1Q96PV0 1343 aa14.03□□□□□ -0.16
HERC1-202ENST00000558324 LAMA4Q16363 1823 aa14.03□□□□□ -0.16
HERC1-202ENST00000558324 PDHBP11177 359 aa14.02□□□□□ -0.17
HERC1-202ENST00000558324 MDM2Q00987 491 aaPredicted RBP14.02□□□□□ -0.17
HERC1-202ENST00000558324 IMMTQ16891 758 aaKnown RBP14.02□□□□□ -0.17
HERC1-202ENST00000558324 SYDE2Q5VT97 1194 aa14.02□□□□□ -0.17
HERC1-202ENST00000558324 MAMDC4Q6UXC1 1216 aa14.02□□□□□ -0.17
HERC1-202ENST00000558324 NSMFQ6X4W1 530 aa14.02□□□□□ -0.17
HERC1-202ENST00000558324 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.02□□□□□ -0.17
HERC1-202ENST00000558324 ARMCX2Q7L311 632 aa14.02□□□□□ -0.17
HERC1-202ENST00000558324 ZNF467Q7Z7K2 595 aaPredicted RBP14.02□□□□□ -0.17
HERC1-202ENST00000558324 DSCC1Q9BVC3 393 aa14.02□□□□□ -0.17
HERC1-202ENST00000558324 SYNRGQ9UMZ2 1314 aa14.01□□□□□ -0.17
HERC1-202ENST00000558324 ICAM1P05362 532 aa14.01□□□□□ -0.17
HERC1-202ENST00000558324 ACVR2BQ13705 512 aa14.01□□□□□ -0.17
HERC1-202ENST00000558324 TKFCQ3LXA3 575 aa14.01□□□□□ -0.17
HERC1-202ENST00000558324 TRIM60Q495X7 471 aa14.01□□□□□ -0.17
HERC1-202ENST00000558324 SLC39A5Q6ZMH5 540 aa14.01□□□□□ -0.17
HERC1-202ENST00000558324 RNF180Q86T96 592 aa14.01□□□□□ -0.17
HERC1-202ENST00000558324 IQCA1Q86XH1 822 aa14.01□□□□□ -0.17
HERC1-202ENST00000558324 CCDC144CPQ8IYA2 1237 aa14.01□□□□□ -0.17
HERC1-202ENST00000558324 FAM133AQ8N9E0 248 aa14.01□□□□□ -0.17
HERC1-202ENST00000558324 UBE2OQ9C0C9 1292 aaKnown RBP14.01□□□□□ -0.17
HERC1-202ENST00000558324 RANBP17Q9H2T7 1088 aaKnown RBP14.01□□□□□ -0.17
HERC1-202ENST00000558324 PRDM5Q9NQX1 630 aaPredicted RBP14.01□□□□□ -0.17
HERC1-202ENST00000558324 CTNNA3Q9UI47 895 aa14.01□□□□□ -0.17
HERC1-202ENST00000558324 FAM184BQ9ULE4 1060 aa14.01□□□□□ -0.17
HERC1-202ENST00000558324 DDX49Q9Y6V7 483 aaKnown RBP14.01□□□□□ -0.17
HERC1-202ENST00000558324 TRIOBPQ9H2D6 2365 aa14□□□□□ -0.17
HERC1-202ENST00000558324 A0A1W2PPC1 479 aa14□□□□□ -0.17
HERC1-202ENST00000558324 SOWAHBA6NEL2 793 aa14□□□□□ -0.17
HERC1-202ENST00000558324 ADAMTS4O75173 837 aa14□□□□□ -0.17
HERC1-202ENST00000558324 GOLGA8HP0CJ92 632 aa14□□□□□ -0.17
HERC1-202ENST00000558324 IRX5P78411 483 aaPredicted RBP14□□□□□ -0.17
HERC1-202ENST00000558324 ZNF543Q08ER8 600 aa14□□□□□ -0.17
HERC1-202ENST00000558324 CCDC144BQ3MJ40 725 aa14□□□□□ -0.17
HERC1-202ENST00000558324 BTNL9Q6UXG8 535 aa14□□□□□ -0.17
HERC1-202ENST00000558324 TTC14Q96N46 770 aa14□□□□□ -0.17
HERC1-202ENST00000558324 PURBQ96QR8 312 aaKnown RBP14□□□□□ -0.17
HERC1-202ENST00000558324 CPVLQ9H3G5 476 aa14□□□□□ -0.17
HERC1-202ENST00000558324 ABHD16BQ9H3Z7 469 aa14□□□□□ -0.17
HERC1-202ENST00000558324 PRKAG2Q9UGJ0 569 aa14□□□□□ -0.17
HERC1-202ENST00000558324 PHF24Q9UPV7 400 aa14□□□□□ -0.17
HERC1-202ENST00000558324 RANBP2P49792 3224 aaKnown RBP14□□□□□ -0.17
HERC1-202ENST00000558324 RAD50Q92878 1312 aa13.99□□□□□ -0.17
HERC1-202ENST00000558324 MYADML2A6NDP7 307 aa13.99□□□□□ -0.17
HERC1-202ENST00000558324 SOX1O00570 391 aaPredicted RBP13.99□□□□□ -0.17
HERC1-202ENST00000558324 NFIBO00712 420 aa13.99□□□□□ -0.17
HERC1-202ENST00000558324 ADCY6O43306 1168 aa13.99□□□□□ -0.17
HERC1-202ENST00000558324 BMP8BP34820 402 aa13.99□□□□□ -0.17
HERC1-202ENST00000558324 PNMA1Q8ND90 353 aa13.99□□□□□ -0.17
HERC1-202ENST00000558324 LRCH3Q96II8 777 aa13.99□□□□□ -0.17
HERC1-202ENST00000558324 ZSCAN10Q96SZ4 725 aaPredicted RBP13.99□□□□□ -0.17
HERC1-202ENST00000558324 LBHD1Q9BQE6 289 aaPredicted RBP13.99□□□□□ -0.17
HERC1-202ENST00000558324 KAT14Q9H8E8 782 aa13.99□□□□□ -0.17
HERC1-202ENST00000558324 CYP39A1Q9NYL5 469 aa13.99□□□□□ -0.17
HERC1-202ENST00000558324 ASTN1O14525 1302 aa13.98□□□□□ -0.17
HERC1-202ENST00000558324 TNKSO95271 1327 aa13.98□□□□□ -0.17
HERC1-202ENST00000558324 A0A1W2PQ45 241 aaPredicted RBP13.98□□□□□ -0.17
HERC1-202ENST00000558324 A0A1W2PQY0 241 aa13.98□□□□□ -0.17
HERC1-202ENST00000558324 C6orf222P0C671 652 aaPredicted RBP13.98□□□□□ -0.17
HERC1-202ENST00000558324 SNHG28P0DPA3 235 aa13.98□□□□□ -0.17
HERC1-202ENST00000558324 CHMLP26374 656 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms