RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 CHST13Q8NET6 341 aa17.78■□□□□ 0.44
ACTN1-217ENST00000556203 U2AF1L4Q8WU68 220 aaKnown RBP17.78■□□□□ 0.44
ACTN1-217ENST00000556203 SHISA4Q96DD7 197 aa17.78■□□□□ 0.44
ACTN1-217ENST00000556203 FBXO40Q9UH90 709 aa17.78■□□□□ 0.44
ACTN1-217ENST00000556203 COL11A1P12107 1806 aaPredicted RBP17.77■□□□□ 0.44
ACTN1-217ENST00000556203 SGPL1O95470 568 aa17.77■□□□□ 0.44
ACTN1-217ENST00000556203 PARP1P09874 1014 aaKnown RBP17.77■□□□□ 0.44
ACTN1-217ENST00000556203 ALAS1P13196 640 aa17.77■□□□□ 0.44
ACTN1-217ENST00000556203 CYP2C19P33261 490 aa17.77■□□□□ 0.44
ACTN1-217ENST00000556203 WTAPQ15007 396 aa17.77■□□□□ 0.44
ACTN1-217ENST00000556203 TKFCQ3LXA3 575 aa17.77■□□□□ 0.44
ACTN1-217ENST00000556203 ASPRV1Q53RT3 343 aa17.77■□□□□ 0.44
ACTN1-217ENST00000556203 TMEM67Q5HYA8 995 aa17.77■□□□□ 0.44
ACTN1-217ENST00000556203 DDX11Q96FC9 970 aa17.77■□□□□ 0.44
ACTN1-217ENST00000556203 UBA5Q9GZZ9 404 aa17.77■□□□□ 0.44
ACTN1-217ENST00000556203 SENP2Q9HC62 589 aa17.77■□□□□ 0.44
ACTN1-217ENST00000556203 RNF146Q9NTX7 359 aa17.77■□□□□ 0.44
ACTN1-217ENST00000556203 CCPG1Q9ULG6 757 aa17.77■□□□□ 0.44
ACTN1-217ENST00000556203 IGHA2P01877 340 aa17.76■□□□□ 0.43
ACTN1-217ENST00000556203 ICAM1P05362 532 aa17.76■□□□□ 0.43
ACTN1-217ENST00000556203 TAL1P17542 331 aaPredicted RBP17.76■□□□□ 0.43
ACTN1-217ENST00000556203 CCND3P30281 292 aaPredicted RBP17.76■□□□□ 0.43
ACTN1-217ENST00000556203 ZNF792Q3KQV3 632 aa17.76■□□□□ 0.43
ACTN1-217ENST00000556203 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.76■□□□□ 0.43
ACTN1-217ENST00000556203 ANKRD35Q8N283 1001 aa17.76■□□□□ 0.43
ACTN1-217ENST00000556203 MAML3Q96JK9 1138 aa17.76■□□□□ 0.43
ACTN1-217ENST00000556203 TRERF1Q96PN7 1200 aa17.76■□□□□ 0.43
ACTN1-217ENST00000556203 CPVLQ9H3G5 476 aa17.76■□□□□ 0.43
ACTN1-217ENST00000556203 ACAD9Q9H845 621 aa17.76■□□□□ 0.43
ACTN1-217ENST00000556203 ZNF236Q9UL36 1845 aa17.76■□□□□ 0.43
ACTN1-217ENST00000556203 PRC1O43663 620 aa17.75■□□□□ 0.43
ACTN1-217ENST00000556203 TFRCP02786 760 aaKnown RBP17.75■□□□□ 0.43
ACTN1-217ENST00000556203 MCM5P33992 734 aa17.75■□□□□ 0.43
ACTN1-217ENST00000556203 COL9A3Q14050 684 aaPredicted RBP17.75■□□□□ 0.43
ACTN1-217ENST00000556203 IGDCC4Q8TDY8 1250 aa17.75■□□□□ 0.43
ACTN1-217ENST00000556203 DIS3Q9Y2L1 958 aaKnown RBP17.75■□□□□ 0.43
ACTN1-217ENST00000556203 BRCA2P51587 3418 aa17.75■□□□□ 0.43
ACTN1-217ENST00000556203 KIAA0100Q14667 2235 aaKnown RBP17.75■□□□□ 0.43
ACTN1-217ENST00000556203 RBBP6Q7Z6E9 1792 aaKnown RBP17.74■□□□□ 0.43
ACTN1-217ENST00000556203 DNAJC25-GNG10A0A024R161 153 aa17.74■□□□□ 0.43
ACTN1-217ENST00000556203 RASEFQ8IZ41 740 aa17.74■□□□□ 0.43
ACTN1-217ENST00000556203 CRISPLD2Q9H0B8 497 aa17.74■□□□□ 0.43
ACTN1-217ENST00000556203 GPHNQ9NQX3 736 aaPredicted RBP17.74■□□□□ 0.43
ACTN1-217ENST00000556203 DHX16O60231 1041 aaKnown RBP17.73■□□□□ 0.43
ACTN1-217ENST00000556203 REC8O95072 547 aa17.73■□□□□ 0.43
ACTN1-217ENST00000556203 CDC37Q16543 378 aaPredicted RBP17.73■□□□□ 0.43
ACTN1-217ENST00000556203 MUM1L1Q5H9M0 696 aa17.73■□□□□ 0.43
ACTN1-217ENST00000556203 CATIPQ7Z7H3 387 aa17.73■□□□□ 0.43
ACTN1-217ENST00000556203 ADGRF4Q8IZF3 695 aa17.73■□□□□ 0.43
ACTN1-217ENST00000556203 STAG2Q8N3U4 1231 aa17.73■□□□□ 0.43
ACTN1-217ENST00000556203 TRPV1Q8NER1 839 aa17.73■□□□□ 0.43
ACTN1-217ENST00000556203 NEK1Q96PY6 1258 aa17.73■□□□□ 0.43
ACTN1-217ENST00000556203 MTA3Q9BTC8 594 aa17.73■□□□□ 0.43
ACTN1-217ENST00000556203 LY9Q9HBG7 655 aa17.73■□□□□ 0.43
ACTN1-217ENST00000556203 A1CFQ9NQ94 594 aaKnown RBP17.73■□□□□ 0.43
ACTN1-217ENST00000556203 PNMA2Q9UL42 364 aa17.73■□□□□ 0.43
ACTN1-217ENST00000556203 SH2B2O14492 632 aaPredicted RBP17.72■□□□□ 0.43
ACTN1-217ENST00000556203 CYBAP13498 195 aa17.72■□□□□ 0.43
ACTN1-217ENST00000556203 CNGA1P29973 690 aa17.72■□□□□ 0.43
ACTN1-217ENST00000556203 TROAPQ12815 778 aa17.72■□□□□ 0.43
ACTN1-217ENST00000556203 GRM4Q14833 912 aa17.72■□□□□ 0.43
ACTN1-217ENST00000556203 TSGA10IPQ3SY00 556 aa17.72■□□□□ 0.43
ACTN1-217ENST00000556203 PRAMEF19Q5SWL8 479 aa17.72■□□□□ 0.43
ACTN1-217ENST00000556203 TMEM87BQ96K49 555 aa17.72■□□□□ 0.43
ACTN1-217ENST00000556203 TINF2Q9BSI4 451 aa17.72■□□□□ 0.43
ACTN1-217ENST00000556203 VAT1LQ9HCJ6 419 aa17.72■□□□□ 0.43
ACTN1-217ENST00000556203 MAD2L2Q9UI95 211 aa17.72■□□□□ 0.43
ACTN1-217ENST00000556203 WDR19Q8NEZ3 1342 aa17.72■□□□□ 0.43
ACTN1-217ENST00000556203 PALM3A6NDB9 673 aaPredicted RBP17.71■□□□□ 0.43
ACTN1-217ENST00000556203 KLRF2D3W0D1 207 aa17.71■□□□□ 0.43
ACTN1-217ENST00000556203 POTEB2H3BUK9 544 aa17.71■□□□□ 0.43
ACTN1-217ENST00000556203 FARP2O94887 1054 aaPredicted RBP17.71■□□□□ 0.43
ACTN1-217ENST00000556203 HSPA4P34932 840 aa17.71■□□□□ 0.43
ACTN1-217ENST00000556203 KRT32Q14532 448 aa17.71■□□□□ 0.43
ACTN1-217ENST00000556203 ADCK5Q3MIX3 580 aa17.71■□□□□ 0.43
ACTN1-217ENST00000556203 NSMFQ6X4W1 530 aa17.71■□□□□ 0.43
ACTN1-217ENST00000556203 NFXL1Q6ZNB6 911 aa17.71■□□□□ 0.43
ACTN1-217ENST00000556203 NUP133Q8WUM0 1156 aa17.71■□□□□ 0.43
ACTN1-217ENST00000556203 LRRC2Q9BYS8 371 aa17.71■□□□□ 0.43
ACTN1-217ENST00000556203 DDX20Q9UHI6 824 aaKnown RBP17.71■□□□□ 0.43
ACTN1-217ENST00000556203 PFASO15067 1338 aa17.71■□□□□ 0.42
ACTN1-217ENST00000556203 NFIBO00712 420 aa17.7■□□□□ 0.42
ACTN1-217ENST00000556203 CAPN2P17655 700 aa17.7■□□□□ 0.42
ACTN1-217ENST00000556203 CNTN2Q02246 1040 aa17.7■□□□□ 0.42
ACTN1-217ENST00000556203 USH1GQ495M9 461 aa17.7■□□□□ 0.42
ACTN1-217ENST00000556203 LHX8Q68G74 356 aa17.7■□□□□ 0.42
ACTN1-217ENST00000556203 ZNF467Q7Z7K2 595 aaPredicted RBP17.7■□□□□ 0.42
ACTN1-217ENST00000556203 ZNF654Q8IZM8 581 aa17.7■□□□□ 0.42
ACTN1-217ENST00000556203 TMTC2Q8N394 836 aa17.7■□□□□ 0.42
ACTN1-217ENST00000556203 MSL3Q8N5Y2 521 aaKnown RBP17.7■□□□□ 0.42
ACTN1-217ENST00000556203 CLEC4DQ8WXI8 215 aa17.7■□□□□ 0.42
ACTN1-217ENST00000556203 KCNB2Q92953 911 aa17.7■□□□□ 0.42
ACTN1-217ENST00000556203 FGD4Q96M96 766 aa17.7■□□□□ 0.42
ACTN1-217ENST00000556203 MYL10Q9BUA6 226 aa17.7■□□□□ 0.42
ACTN1-217ENST00000556203 JMJD4Q9H9V9 463 aa17.7■□□□□ 0.42
ACTN1-217ENST00000556203 CYP39A1Q9NYL5 469 aa17.7■□□□□ 0.42
ACTN1-217ENST00000556203 OGDHLQ9ULD0 1010 aa17.7■□□□□ 0.42
ACTN1-217ENST00000556203 CCDC69A6NI79 296 aa17.69■□□□□ 0.42
ACTN1-217ENST00000556203 DDAH1O94760 285 aa17.69■□□□□ 0.42
ACTN1-217ENST00000556203 LIFRP42702 1097 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms