RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 CHURC1Q8WUH1 139 aa6.95□□□□□ -1.3
CCDC65-204ENST00000552188 MKL1Q969V6 931 aa6.95□□□□□ -1.3
CCDC65-204ENST00000552188 ZNF333Q96JL9 665 aa6.95□□□□□ -1.3
CCDC65-204ENST00000552188 KCNK17Q96T54 332 aa6.95□□□□□ -1.3
CCDC65-204ENST00000552188 SLF1Q9BQI6 1058 aa6.95□□□□□ -1.3
CCDC65-204ENST00000552188 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.95□□□□□ -1.3
CCDC65-204ENST00000552188 SPATC1LQ9H0A9 340 aa6.95□□□□□ -1.3
CCDC65-204ENST00000552188 PORCNQ9H237 461 aa6.95□□□□□ -1.3
CCDC65-204ENST00000552188 MROH8Q9H579 483 aa6.95□□□□□ -1.3
CCDC65-204ENST00000552188 CNNM2Q9H8M5 875 aa6.95□□□□□ -1.3
CCDC65-204ENST00000552188 INCENPQ9NQS7 918 aa6.95□□□□□ -1.3
CCDC65-204ENST00000552188 FBXO28Q9NVF7 368 aa6.95□□□□□ -1.3
CCDC65-204ENST00000552188 BTBD7Q9P203 1132 aa6.95□□□□□ -1.3
CCDC65-204ENST00000552188 FEM1BQ9UK73 627 aa6.95□□□□□ -1.3
CCDC65-204ENST00000552188 PPP1R9AQ9ULJ8 1098 aa6.95□□□□□ -1.3
CCDC65-204ENST00000552188 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.95□□□□□ -1.3
CCDC65-204ENST00000552188 PLIN4Q96Q06 1357 aa6.95□□□□□ -1.3
CCDC65-204ENST00000552188 FRMPD3Q5JV73 1810 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 IGKV6D-41A0A0C4DH26 115 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 SLC15A5A6NIM6 579 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 TMEM232C9JQI7 657 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 FOXP2O15409 715 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 STRNO43815 780 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 CNMDO75829 334 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 TFRCP02786 760 aaKnown RBP6.94□□□□□ -1.3
CCDC65-204ENST00000552188 HMGCRP04035 888 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 FDX1P10109 184 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 FCER1AP12319 257 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 ERCC3P19447 782 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 EN2P19622 333 aaPredicted RBP6.94□□□□□ -1.3
CCDC65-204ENST00000552188 PTPREP23469 700 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 MCCP23508 829 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 COPB2P35606 906 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 STAT3P40763 770 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 RGS19P49795 217 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 NT5C2P49902 561 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 STAT2P52630 851 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 MAP2K5Q13163 448 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 KCTD2Q14681 263 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 MTFR1Q15390 333 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 MFSD14CQ5VZR4 134 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 RALYLQ86SE5 291 aaKnown RBP6.94□□□□□ -1.3
CCDC65-204ENST00000552188 FAM160B2Q86V87 743 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 CPXCR1Q8N123 301 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 GMCL1P1Q8NEA9 526 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 SHCBP1Q8NEM2 672 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 STAG1Q8WVM7 1258 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 MMP19Q99542 508 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 ZKSCAN3Q9BRR0 538 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 MOV10L1Q9BXT6 1211 aaKnown RBP6.94□□□□□ -1.3
CCDC65-204ENST00000552188 KRT23Q9C075 422 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 HMX1Q9NP08 348 aaPredicted RBP6.94□□□□□ -1.3
CCDC65-204ENST00000552188 GJD2Q9UKL4 321 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 SYNPO2Q9UMS6 1093 aa6.94□□□□□ -1.3
CCDC65-204ENST00000552188 ZNF236Q9UL36 1845 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 ERICH2A1L162 156 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 B4E1Z4 1266 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 VWA5AO00534 786 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 GPR37O15354 613 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 NMT2O60551 498 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 KDM4AO75164 1064 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 FGRP09769 529 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 XRCC5P13010 732 aaKnown RBP6.93□□□□□ -1.3
CCDC65-204ENST00000552188 COL9A1P20849 921 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 CNGA1P29973 690 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 PSEN2P49810 448 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 PTGDRQ13258 359 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 TMEM132BQ14DG7 1078 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 SNRNP48Q6IEG0 339 aaKnown RBP6.93□□□□□ -1.3
CCDC65-204ENST00000552188 RCSD1Q6JBY9 416 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 KCTD1Q719H9 257 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 TBC1D10CQ8IV04 446 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 DCAF4Q8WV16 495 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 DDX11Q96FC9 970 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 TTC14Q96N46 770 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 APBA2Q99767 749 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 UBAC1Q9BSL1 405 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.93□□□□□ -1.3
CCDC65-204ENST00000552188 UNC93B1Q9H1C4 597 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 KAT14Q9H8E8 782 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 GPCPD1Q9NPB8 672 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 IL17RBQ9NRM6 502 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 TCP11L1Q9NUJ3 509 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 RPTORQ8N122 1335 aa6.93□□□□□ -1.3
CCDC65-204ENST00000552188 SGSM2O43147 1006 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 DHX16O60231 1041 aaKnown RBP6.92□□□□□ -1.3
CCDC65-204ENST00000552188 EIF5BO60841 1220 aaKnown RBP6.92□□□□□ -1.3
CCDC65-204ENST00000552188 SGPL1O95470 568 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 GJB1P08034 283 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 CAPN2P17655 700 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 FECHP22830 423 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 ADORA2AP29274 412 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 GRB14Q14449 540 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 SART3Q15020 963 aaKnown RBP6.92□□□□□ -1.3
CCDC65-204ENST00000552188 CCL14Q16627 93 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 MORN1Q5T089 497 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 CCDC174Q6PII3 467 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 POTEEQ6S8J3 1075 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 RIOX2Q8IUF8 465 aa6.92□□□□□ -1.3
CCDC65-204ENST00000552188 ANKRD35Q8N283 1001 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms