RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 IVNS1ABPQ9Y6Y0 642 aa11.42□□□□□ -0.58
YBX3-212ENST00000542002 MYH4Q9Y623 1939 aa11.41□□□□□ -0.58
YBX3-212ENST00000542002 DNAJC25-GNG10A0A024R161 153 aa11.41□□□□□ -0.58
YBX3-212ENST00000542002 IFIT3O14879 490 aaKnown RBP11.41□□□□□ -0.58
YBX3-212ENST00000542002 PRKAR2AP13861 404 aaKnown RBP11.41□□□□□ -0.58
YBX3-212ENST00000542002 ZKSCAN1P17029 563 aaPredicted RBP11.41□□□□□ -0.58
YBX3-212ENST00000542002 GJA8P48165 433 aa11.41□□□□□ -0.58
YBX3-212ENST00000542002 OAZ1P54368 228 aa11.41□□□□□ -0.58
YBX3-212ENST00000542002 TRDNQ13061 729 aa11.41□□□□□ -0.58
YBX3-212ENST00000542002 ADCK5Q3MIX3 580 aa11.41□□□□□ -0.58
YBX3-212ENST00000542002 MUM1L1Q5H9M0 696 aa11.41□□□□□ -0.58
YBX3-212ENST00000542002 PRAMEF19Q5SWL8 479 aa11.41□□□□□ -0.58
YBX3-212ENST00000542002 IFIT1BQ5T764 474 aaKnown RBP11.41□□□□□ -0.58
YBX3-212ENST00000542002 SYDE2Q5VT97 1194 aa11.41□□□□□ -0.58
YBX3-212ENST00000542002 DEFB118Q96PH6 123 aa11.41□□□□□ -0.58
YBX3-212ENST00000542002 HOMER2Q9NSB8 354 aa11.41□□□□□ -0.58
YBX3-212ENST00000542002 PARP14Q460N5 1801 aa11.41□□□□□ -0.58
YBX3-212ENST00000542002 RPTORQ8N122 1335 aa11.4□□□□□ -0.58
YBX3-212ENST00000542002 LAMA4Q16363 1823 aa11.4□□□□□ -0.58
YBX3-212ENST00000542002 PRC1O43663 620 aa11.4□□□□□ -0.58
YBX3-212ENST00000542002 SGPL1O95470 568 aa11.4□□□□□ -0.58
YBX3-212ENST00000542002 FDX1P10109 184 aa11.4□□□□□ -0.58
YBX3-212ENST00000542002 TROAPQ12815 778 aa11.4□□□□□ -0.58
YBX3-212ENST00000542002 KCTD2Q14681 263 aa11.4□□□□□ -0.58
YBX3-212ENST00000542002 TSGA10IPQ3SY00 556 aa11.4□□□□□ -0.58
YBX3-212ENST00000542002 LHX8Q68G74 356 aa11.4□□□□□ -0.58
YBX3-212ENST00000542002 RALYLQ86SE5 291 aaKnown RBP11.4□□□□□ -0.58
YBX3-212ENST00000542002 ADGRF4Q8IZF3 695 aa11.4□□□□□ -0.58
YBX3-212ENST00000542002 U2AF1L4Q8WU68 220 aaKnown RBP11.4□□□□□ -0.58
YBX3-212ENST00000542002 KCNB2Q92953 911 aa11.4□□□□□ -0.58
YBX3-212ENST00000542002 MAML3Q96JK9 1138 aa11.4□□□□□ -0.58
YBX3-212ENST00000542002 FGD4Q96M96 766 aa11.4□□□□□ -0.58
YBX3-212ENST00000542002 TRERF1Q96PN7 1200 aa11.4□□□□□ -0.58
YBX3-212ENST00000542002 PURBQ96QR8 312 aaKnown RBP11.4□□□□□ -0.58
YBX3-212ENST00000542002 LRRC2Q9BYS8 371 aa11.4□□□□□ -0.58
YBX3-212ENST00000542002 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.4□□□□□ -0.58
YBX3-212ENST00000542002 LY9Q9HBG7 655 aa11.4□□□□□ -0.58
YBX3-212ENST00000542002 MAD2L2Q9UI95 211 aa11.4□□□□□ -0.58
YBX3-212ENST00000542002 CTDP1Q9Y5B0 961 aaPredicted RBP11.4□□□□□ -0.58
YBX3-212ENST00000542002 TNRC18O15417 2968 aaPredicted RBP11.39□□□□□ -0.59
YBX3-212ENST00000542002 PALM3A6NDB9 673 aaPredicted RBP11.39□□□□□ -0.59
YBX3-212ENST00000542002 ICAM1P05362 532 aa11.39□□□□□ -0.59
YBX3-212ENST00000542002 ALAS1P13196 640 aa11.39□□□□□ -0.59
YBX3-212ENST00000542002 MNX1P50219 401 aaPredicted RBP11.39□□□□□ -0.59
YBX3-212ENST00000542002 EXOSC10Q01780 885 aaKnown RBP11.39□□□□□ -0.59
YBX3-212ENST00000542002 CNTN2Q02246 1040 aa11.39□□□□□ -0.59
YBX3-212ENST00000542002 MLLT1Q03111 559 aaPredicted RBP11.39□□□□□ -0.59
YBX3-212ENST00000542002 TMEM67Q5HYA8 995 aa11.39□□□□□ -0.59
YBX3-212ENST00000542002 GPATCH4Q5T3I0 446 aaKnown RBP11.39□□□□□ -0.59
YBX3-212ENST00000542002 OLFML2BQ68BL8 750 aa11.39□□□□□ -0.59
YBX3-212ENST00000542002 CASC1Q6TDU7 716 aa11.39□□□□□ -0.59
YBX3-212ENST00000542002 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.39□□□□□ -0.59
YBX3-212ENST00000542002 UBE2Q1Q7Z7E8 422 aa11.39□□□□□ -0.59
YBX3-212ENST00000542002 TRMT44Q8IYL2 757 aaKnown RBP11.39□□□□□ -0.59
YBX3-212ENST00000542002 CHST13Q8NET6 341 aa11.39□□□□□ -0.59
YBX3-212ENST00000542002 CLEC4DQ8WXI8 215 aa11.39□□□□□ -0.59
YBX3-212ENST00000542002 CRISPLD2Q9H0B8 497 aa11.39□□□□□ -0.59
YBX3-212ENST00000542002 JMJD4Q9H9V9 463 aa11.39□□□□□ -0.59
YBX3-212ENST00000542002 VAT1LQ9HCJ6 419 aa11.39□□□□□ -0.59
YBX3-212ENST00000542002 HMX1Q9NP08 348 aaPredicted RBP11.39□□□□□ -0.59
YBX3-212ENST00000542002 DDX49Q9Y6V7 483 aaKnown RBP11.39□□□□□ -0.59
YBX3-212ENST00000542002 ASTN1O14525 1302 aa11.38□□□□□ -0.59
YBX3-212ENST00000542002 COL11A1P12107 1806 aaPredicted RBP11.38□□□□□ -0.59
YBX3-212ENST00000542002 SH2B2O14492 632 aaPredicted RBP11.38□□□□□ -0.59
YBX3-212ENST00000542002 TFRCP02786 760 aaKnown RBP11.38□□□□□ -0.59
YBX3-212ENST00000542002 PARP1P09874 1014 aaKnown RBP11.38□□□□□ -0.59
YBX3-212ENST00000542002 CPA1P15085 419 aa11.38□□□□□ -0.59
YBX3-212ENST00000542002 MCM5P33992 734 aa11.38□□□□□ -0.59
YBX3-212ENST00000542002 HSPA4P34932 840 aa11.38□□□□□ -0.59
YBX3-212ENST00000542002 COPB2P35606 906 aa11.38□□□□□ -0.59
YBX3-212ENST00000542002 WTAPQ15007 396 aa11.38□□□□□ -0.59
YBX3-212ENST00000542002 ASPRV1Q53RT3 343 aa11.38□□□□□ -0.59
YBX3-212ENST00000542002 MFSD14CQ5VZR4 134 aa11.38□□□□□ -0.59
YBX3-212ENST00000542002 TCEANC2Q96MN5 208 aa11.38□□□□□ -0.59
YBX3-212ENST00000542002 MYL10Q9BUA6 226 aa11.38□□□□□ -0.59
YBX3-212ENST00000542002 A1CFQ9NQ94 594 aaKnown RBP11.38□□□□□ -0.59
YBX3-212ENST00000542002 RNF146Q9NTX7 359 aa11.38□□□□□ -0.59
YBX3-212ENST00000542002 CCPG1Q9ULG6 757 aa11.38□□□□□ -0.59
YBX3-212ENST00000542002 SOWAHBA6NEL2 793 aa11.37□□□□□ -0.59
YBX3-212ENST00000542002 KLRF2D3W0D1 207 aa11.37□□□□□ -0.59
YBX3-212ENST00000542002 NFIBO00712 420 aa11.37□□□□□ -0.59
YBX3-212ENST00000542002 CYTH3O43739 400 aa11.37□□□□□ -0.59
YBX3-212ENST00000542002 PPP1R11O60927 126 aaPredicted RBP11.37□□□□□ -0.59
YBX3-212ENST00000542002 SNAI1O95863 264 aaPredicted RBP11.37□□□□□ -0.59
YBX3-212ENST00000542002 CYBAP13498 195 aa11.37□□□□□ -0.59
YBX3-212ENST00000542002 GRM4Q14833 912 aa11.37□□□□□ -0.59
YBX3-212ENST00000542002 ANKRD35Q8N283 1001 aa11.37□□□□□ -0.59
YBX3-212ENST00000542002 FAM133AQ8N9E0 248 aa11.37□□□□□ -0.59
YBX3-212ENST00000542002 TBC1D5Q92609 795 aa11.37□□□□□ -0.59
YBX3-212ENST00000542002 DDX11Q96FC9 970 aa11.37□□□□□ -0.59
YBX3-212ENST00000542002 NEK1Q96PY6 1258 aa11.37□□□□□ -0.59
YBX3-212ENST00000542002 TINF2Q9BSI4 451 aa11.37□□□□□ -0.59
YBX3-212ENST00000542002 USP26Q9BXU7 913 aa11.37□□□□□ -0.59
YBX3-212ENST00000542002 ACAD9Q9H845 621 aa11.37□□□□□ -0.59
YBX3-212ENST00000542002 FBXO40Q9UH90 709 aa11.37□□□□□ -0.59
YBX3-212ENST00000542002 DIS3Q9Y2L1 958 aaKnown RBP11.37□□□□□ -0.59
YBX3-212ENST00000542002 SNX14Q9Y5W7 946 aa11.37□□□□□ -0.59
YBX3-212ENST00000542002 ERICH2A1L162 156 aa11.36□□□□□ -0.59
YBX3-212ENST00000542002 LIFRP42702 1097 aa11.36□□□□□ -0.59
YBX3-212ENST00000542002 BAATQ14032 418 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms