RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 IFIT3O14879 490 aaKnown RBP12.56□□□□□ -0.4
HMGA2-209ENST00000539662 STRNO43815 780 aa12.56□□□□□ -0.4
HMGA2-209ENST00000539662 FCER1AP12319 257 aa12.56□□□□□ -0.4
HMGA2-209ENST00000539662 UBXN2AP68543 259 aa12.56□□□□□ -0.4
HMGA2-209ENST00000539662 TRDNQ13061 729 aa12.56□□□□□ -0.4
HMGA2-209ENST00000539662 PRAMEF19Q5SWL8 479 aa12.56□□□□□ -0.4
HMGA2-209ENST00000539662 IFIT1BQ5T764 474 aaKnown RBP12.56□□□□□ -0.4
HMGA2-209ENST00000539662 DPP9Q86TI2 863 aa12.56□□□□□ -0.4
HMGA2-209ENST00000539662 FGD4Q96M96 766 aa12.56□□□□□ -0.4
HMGA2-209ENST00000539662 TCEANC2Q96MN5 208 aa12.56□□□□□ -0.4
HMGA2-209ENST00000539662 DEFB118Q96PH6 123 aa12.56□□□□□ -0.4
HMGA2-209ENST00000539662 PURBQ96QR8 312 aaKnown RBP12.56□□□□□ -0.4
HMGA2-209ENST00000539662 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.56□□□□□ -0.4
HMGA2-209ENST00000539662 RANBP17Q9H2T7 1088 aaKnown RBP12.56□□□□□ -0.4
HMGA2-209ENST00000539662 PAK6Q9NQU5 681 aaPredicted RBP12.56□□□□□ -0.4
HMGA2-209ENST00000539662 PRC1O43663 620 aa12.55□□□□□ -0.4
HMGA2-209ENST00000539662 GJB1P08034 283 aa12.55□□□□□ -0.4
HMGA2-209ENST00000539662 ALAS1P13196 640 aa12.55□□□□□ -0.4
HMGA2-209ENST00000539662 CPA1P15085 419 aa12.55□□□□□ -0.4
HMGA2-209ENST00000539662 ZNF792Q3KQV3 632 aa12.55□□□□□ -0.4
HMGA2-209ENST00000539662 RALYLQ86SE5 291 aaKnown RBP12.55□□□□□ -0.4
HMGA2-209ENST00000539662 U2AF1L4Q8WU68 220 aaKnown RBP12.55□□□□□ -0.4
HMGA2-209ENST00000539662 MAML3Q96JK9 1138 aa12.55□□□□□ -0.4
HMGA2-209ENST00000539662 MYL10Q9BUA6 226 aa12.55□□□□□ -0.4
HMGA2-209ENST00000539662 LY9Q9HBG7 655 aa12.55□□□□□ -0.4
HMGA2-209ENST00000539662 CTDP1Q9Y5B0 961 aaPredicted RBP12.55□□□□□ -0.4
HMGA2-209ENST00000539662 RPTORQ8N122 1335 aa12.55□□□□□ -0.4
HMGA2-209ENST00000539662 FRMPD3Q5JV73 1810 aa12.55□□□□□ -0.4
HMGA2-209ENST00000539662 MCM3APO60318 1980 aa12.54□□□□□ -0.4
HMGA2-209ENST00000539662 DNAJC25-GNG10A0A024R161 153 aa12.54□□□□□ -0.4
HMGA2-209ENST00000539662 SGPL1O95470 568 aa12.54□□□□□ -0.4
HMGA2-209ENST00000539662 GJA8P48165 433 aa12.54□□□□□ -0.4
HMGA2-209ENST00000539662 OAZ1P54368 228 aa12.54□□□□□ -0.4
HMGA2-209ENST00000539662 CNTN2Q02246 1040 aa12.54□□□□□ -0.4
HMGA2-209ENST00000539662 MLLT1Q03111 559 aaPredicted RBP12.54□□□□□ -0.4
HMGA2-209ENST00000539662 WTAPQ15007 396 aa12.54□□□□□ -0.4
HMGA2-209ENST00000539662 CCDC178Q5BJE1 867 aa12.54□□□□□ -0.4
HMGA2-209ENST00000539662 TMEM67Q5HYA8 995 aa12.54□□□□□ -0.4
HMGA2-209ENST00000539662 RAB11FIP4Q86YS3 637 aa12.54□□□□□ -0.4
HMGA2-209ENST00000539662 ADGRF4Q8IZF3 695 aa12.54□□□□□ -0.4
HMGA2-209ENST00000539662 ABRAQ8N0Z2 381 aa12.54□□□□□ -0.4
HMGA2-209ENST00000539662 TRERF1Q96PN7 1200 aa12.54□□□□□ -0.4
HMGA2-209ENST00000539662 VAT1LQ9HCJ6 419 aa12.54□□□□□ -0.4
HMGA2-209ENST00000539662 RNF146Q9NTX7 359 aa12.54□□□□□ -0.4
HMGA2-209ENST00000539662 MAD2L2Q9UI95 211 aa12.54□□□□□ -0.4
HMGA2-209ENST00000539662 CCPG1Q9ULG6 757 aa12.54□□□□□ -0.4
HMGA2-209ENST00000539662 BAZ2BQ9UIF8 2168 aaKnown RBP12.54□□□□□ -0.4
HMGA2-209ENST00000539662 ASTN1O14525 1302 aa12.54□□□□□ -0.4
HMGA2-209ENST00000539662 NFIBO00712 420 aa12.53□□□□□ -0.4
HMGA2-209ENST00000539662 SH2B2O14492 632 aaPredicted RBP12.53□□□□□ -0.4
HMGA2-209ENST00000539662 ICAM1P05362 532 aa12.53□□□□□ -0.4
HMGA2-209ENST00000539662 PARP1P09874 1014 aaKnown RBP12.53□□□□□ -0.4
HMGA2-209ENST00000539662 NT5C2P49902 561 aa12.53□□□□□ -0.4
HMGA2-209ENST00000539662 MNX1P50219 401 aaPredicted RBP12.53□□□□□ -0.4
HMGA2-209ENST00000539662 TROAPQ12815 778 aa12.53□□□□□ -0.4
HMGA2-209ENST00000539662 KCTD2Q14681 263 aa12.53□□□□□ -0.4
HMGA2-209ENST00000539662 ANO1Q5XXA6 986 aa12.53□□□□□ -0.4
HMGA2-209ENST00000539662 LHX8Q68G74 356 aa12.53□□□□□ -0.4
HMGA2-209ENST00000539662 CASC1Q6TDU7 716 aa12.53□□□□□ -0.4
HMGA2-209ENST00000539662 DIS3LQ8TF46 1054 aaKnown RBP12.53□□□□□ -0.4
HMGA2-209ENST00000539662 CLEC4DQ8WXI8 215 aa12.53□□□□□ -0.4
HMGA2-209ENST00000539662 JMJD4Q9H9V9 463 aa12.53□□□□□ -0.4
HMGA2-209ENST00000539662 HMX1Q9NP08 348 aaPredicted RBP12.53□□□□□ -0.4
HMGA2-209ENST00000539662 A1CFQ9NQ94 594 aaKnown RBP12.53□□□□□ -0.4
HMGA2-209ENST00000539662 MYH6P13533 1939 aa12.52□□□□□ -0.4
HMGA2-209ENST00000539662 PALM3A6NDB9 673 aaPredicted RBP12.52□□□□□ -0.41
HMGA2-209ENST00000539662 SOWAHBA6NEL2 793 aa12.52□□□□□ -0.41
HMGA2-209ENST00000539662 PPP1R11O60927 126 aaPredicted RBP12.52□□□□□ -0.41
HMGA2-209ENST00000539662 FDX1P10109 184 aa12.52□□□□□ -0.41
HMGA2-209ENST00000539662 CYBAP13498 195 aa12.52□□□□□ -0.41
HMGA2-209ENST00000539662 RXRAP19793 462 aa12.52□□□□□ -0.41
HMGA2-209ENST00000539662 HSPA4P34932 840 aa12.52□□□□□ -0.41
HMGA2-209ENST00000539662 EXOSC10Q01780 885 aaKnown RBP12.52□□□□□ -0.41
HMGA2-209ENST00000539662 GRM4Q14833 912 aa12.52□□□□□ -0.41
HMGA2-209ENST00000539662 CDC37Q16543 378 aaPredicted RBP12.52□□□□□ -0.41
HMGA2-209ENST00000539662 GPATCH4Q5T3I0 446 aaKnown RBP12.52□□□□□ -0.41
HMGA2-209ENST00000539662 OLFML2BQ68BL8 750 aa12.52□□□□□ -0.41
HMGA2-209ENST00000539662 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.52□□□□□ -0.41
HMGA2-209ENST00000539662 UBE2Q1Q7Z7E8 422 aa12.52□□□□□ -0.41
HMGA2-209ENST00000539662 ANKRD35Q8N283 1001 aa12.52□□□□□ -0.41
HMGA2-209ENST00000539662 CHST13Q8NET6 341 aa12.52□□□□□ -0.41
HMGA2-209ENST00000539662 TBC1D5Q92609 795 aa12.52□□□□□ -0.41
HMGA2-209ENST00000539662 KCNB2Q92953 911 aa12.52□□□□□ -0.41
HMGA2-209ENST00000539662 DDX11Q96FC9 970 aa12.52□□□□□ -0.41
HMGA2-209ENST00000539662 CRISPLD2Q9H0B8 497 aa12.52□□□□□ -0.41
HMGA2-209ENST00000539662 ACAD9Q9H845 621 aa12.52□□□□□ -0.41
HMGA2-209ENST00000539662 SNX14Q9Y5W7 946 aa12.52□□□□□ -0.41
HMGA2-209ENST00000539662 KLRF2D3W0D1 207 aa12.51□□□□□ -0.41
HMGA2-209ENST00000539662 CYTH3O43739 400 aa12.51□□□□□ -0.41
HMGA2-209ENST00000539662 SNAI1O95863 264 aaPredicted RBP12.51□□□□□ -0.41
HMGA2-209ENST00000539662 TFRCP02786 760 aaKnown RBP12.51□□□□□ -0.41
HMGA2-209ENST00000539662 MCM5P33992 734 aa12.51□□□□□ -0.41
HMGA2-209ENST00000539662 COPB2P35606 906 aa12.51□□□□□ -0.41
HMGA2-209ENST00000539662 QRICH1Q2TAL8 776 aa12.51□□□□□ -0.41
HMGA2-209ENST00000539662 TSGA10IPQ3SY00 556 aa12.51□□□□□ -0.41
HMGA2-209ENST00000539662 USH1GQ495M9 461 aa12.51□□□□□ -0.41
HMGA2-209ENST00000539662 ASPRV1Q53RT3 343 aa12.51□□□□□ -0.41
HMGA2-209ENST00000539662 MFSD14CQ5VZR4 134 aa12.51□□□□□ -0.41
HMGA2-209ENST00000539662 TRMT44Q8IYL2 757 aaKnown RBP12.51□□□□□ -0.41
HMGA2-209ENST00000539662 ZNF654Q8IZM8 581 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms