RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 UBAC1Q9BSL1 405 aa15.45■□□□□ 0.06
PRKDC-206ENST00000536429 RANBP17Q9H2T7 1088 aaKnown RBP15.45■□□□□ 0.06
PRKDC-206ENST00000536429 KAT14Q9H8E8 782 aa15.45■□□□□ 0.06
PRKDC-206ENST00000536429 ANO2Q9NQ90 1003 aa15.45■□□□□ 0.06
PRKDC-206ENST00000536429 ZNF236Q9UL36 1845 aa15.45■□□□□ 0.06
PRKDC-206ENST00000536429 SLC27A2O14975 620 aa15.44■□□□□ 0.06
PRKDC-206ENST00000536429 CDC45O75419 566 aa15.44■□□□□ 0.06
PRKDC-206ENST00000536429 FDX1P10109 184 aa15.44■□□□□ 0.06
PRKDC-206ENST00000536429 MNX1P50219 401 aaPredicted RBP15.44■□□□□ 0.06
PRKDC-206ENST00000536429 CCDC178Q5BJE1 867 aa15.44■□□□□ 0.06
PRKDC-206ENST00000536429 LHX8Q68G74 356 aa15.44■□□□□ 0.06
PRKDC-206ENST00000536429 MB21D2Q8IYB1 491 aaPredicted RBP15.44■□□□□ 0.06
PRKDC-206ENST00000536429 DIS3LQ8TF46 1054 aaKnown RBP15.44■□□□□ 0.06
PRKDC-206ENST00000536429 FGD4Q96M96 766 aa15.44■□□□□ 0.06
PRKDC-206ENST00000536429 UBA5Q9GZZ9 404 aa15.44■□□□□ 0.06
PRKDC-206ENST00000536429 RNF146Q9NTX7 359 aa15.44■□□□□ 0.06
PRKDC-206ENST00000536429 PPP4R2Q9NY27 417 aa15.44■□□□□ 0.06
PRKDC-206ENST00000536429 DNAJC25-GNG10A0A024R161 153 aa15.43■□□□□ 0.06
PRKDC-206ENST00000536429 FARP2O94887 1054 aaPredicted RBP15.43■□□□□ 0.06
PRKDC-206ENST00000536429 ALAS1P13196 640 aa15.43■□□□□ 0.06
PRKDC-206ENST00000536429 CYBAP13498 195 aa15.43■□□□□ 0.06
PRKDC-206ENST00000536429 TRDNQ13061 729 aa15.43■□□□□ 0.06
PRKDC-206ENST00000536429 NECTIN1Q15223 517 aa15.43■□□□□ 0.06
PRKDC-206ENST00000536429 MUM1L1Q5H9M0 696 aa15.43■□□□□ 0.06
PRKDC-206ENST00000536429 IFIT1BQ5T764 474 aaKnown RBP15.43■□□□□ 0.06
PRKDC-206ENST00000536429 CREB3L3Q68CJ9 461 aa15.43■□□□□ 0.06
PRKDC-206ENST00000536429 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.43■□□□□ 0.06
PRKDC-206ENST00000536429 CHST13Q8NET6 341 aa15.43■□□□□ 0.06
PRKDC-206ENST00000536429 NCOA7Q8NI08 942 aa15.43■□□□□ 0.06
PRKDC-206ENST00000536429 TRERF1Q96PN7 1200 aa15.43■□□□□ 0.06
PRKDC-206ENST00000536429 GPHNQ9NQX3 736 aaPredicted RBP15.43■□□□□ 0.06
PRKDC-206ENST00000536429 IFIT3O14879 490 aaKnown RBP15.42■□□□□ 0.06
PRKDC-206ENST00000536429 ICAM1P05362 532 aa15.42■□□□□ 0.06
PRKDC-206ENST00000536429 CNGA1P29973 690 aa15.42■□□□□ 0.06
PRKDC-206ENST00000536429 ANO1Q5XXA6 986 aa15.42■□□□□ 0.06
PRKDC-206ENST00000536429 RALYLQ86SE5 291 aaKnown RBP15.42■□□□□ 0.06
PRKDC-206ENST00000536429 ANKRD35Q8N283 1001 aa15.42■□□□□ 0.06
PRKDC-206ENST00000536429 DDX11Q96FC9 970 aa15.42■□□□□ 0.06
PRKDC-206ENST00000536429 ACAD9Q9H845 621 aa15.42■□□□□ 0.06
PRKDC-206ENST00000536429 A1CFQ9NQ94 594 aaKnown RBP15.42■□□□□ 0.06
PRKDC-206ENST00000536429 SLC5A4Q9NY91 659 aa15.42■□□□□ 0.06
PRKDC-206ENST00000536429 OGDHLQ9ULD0 1010 aa15.42■□□□□ 0.06
PRKDC-206ENST00000536429 CCPG1Q9ULG6 757 aa15.42■□□□□ 0.06
PRKDC-206ENST00000536429 CNTN2Q02246 1040 aa15.41■□□□□ 0.06
PRKDC-206ENST00000536429 GPATCH4Q5T3I0 446 aaKnown RBP15.41■□□□□ 0.06
PRKDC-206ENST00000536429 STAG2Q8N3U4 1231 aa15.41■□□□□ 0.06
PRKDC-206ENST00000536429 PAWRQ96IZ0 340 aaKnown RBP15.41■□□□□ 0.06
PRKDC-206ENST00000536429 TINF2Q9BSI4 451 aa15.41■□□□□ 0.06
PRKDC-206ENST00000536429 FBXO40Q9UH90 709 aa15.41■□□□□ 0.06
PRKDC-206ENST00000536429 DDX20Q9UHI6 824 aaKnown RBP15.41■□□□□ 0.06
PRKDC-206ENST00000536429 DIS3Q9Y2L1 958 aaKnown RBP15.41■□□□□ 0.06
PRKDC-206ENST00000536429 DDX49Q9Y6V7 483 aaKnown RBP15.41■□□□□ 0.06
PRKDC-206ENST00000536429 NFIBO00712 420 aa15.4■□□□□ 0.06
PRKDC-206ENST00000536429 SLC35G1Q2M3R5 365 aa15.4■□□□□ 0.06
PRKDC-206ENST00000536429 TKFCQ3LXA3 575 aa15.4■□□□□ 0.06
PRKDC-206ENST00000536429 IGDCC4Q8TDY8 1250 aa15.4■□□□□ 0.06
PRKDC-206ENST00000536429 PURBQ96QR8 312 aaKnown RBP15.4■□□□□ 0.06
PRKDC-206ENST00000536429 ASTN1O14525 1302 aa15.4■□□□□ 0.06
PRKDC-206ENST00000536429 SOWAHBA6NEL2 793 aa15.39■□□□□ 0.05
PRKDC-206ENST00000536429 SNAI1O95863 264 aaPredicted RBP15.39■□□□□ 0.05
PRKDC-206ENST00000536429 PARP1P09874 1014 aaKnown RBP15.39■□□□□ 0.05
PRKDC-206ENST00000536429 WTAPQ15007 396 aa15.39■□□□□ 0.05
PRKDC-206ENST00000536429 ASPRV1Q53RT3 343 aa15.39■□□□□ 0.05
PRKDC-206ENST00000536429 TMEM67Q5HYA8 995 aa15.39■□□□□ 0.05
PRKDC-206ENST00000536429 ERICH6BQ5W0A0 696 aa15.39■□□□□ 0.05
PRKDC-206ENST00000536429 CASC1Q6TDU7 716 aa15.39■□□□□ 0.05
PRKDC-206ENST00000536429 RASEFQ8IZ41 740 aa15.39■□□□□ 0.05
PRKDC-206ENST00000536429 ADGRF4Q8IZF3 695 aa15.39■□□□□ 0.05
PRKDC-206ENST00000536429 FAM133AQ8N9E0 248 aa15.39■□□□□ 0.05
PRKDC-206ENST00000536429 CLEC4DQ8WXI8 215 aa15.39■□□□□ 0.05
PRKDC-206ENST00000536429 LENG1Q96BZ8 264 aaPredicted RBP15.39■□□□□ 0.05
PRKDC-206ENST00000536429 MAD2L2Q9UI95 211 aa15.39■□□□□ 0.05
PRKDC-206ENST00000536429 POTEB2H3BUK9 544 aa15.38■□□□□ 0.05
PRKDC-206ENST00000536429 SEPT4O43236 478 aa15.38■□□□□ 0.05
PRKDC-206ENST00000536429 PRC1O43663 620 aa15.38■□□□□ 0.05
PRKDC-206ENST00000536429 ZNF865P0CJ78 1059 aaPredicted RBP15.38■□□□□ 0.05
PRKDC-206ENST00000536429 CDC37Q16543 378 aaPredicted RBP15.38■□□□□ 0.05
PRKDC-206ENST00000536429 USH1GQ495M9 461 aa15.38■□□□□ 0.05
PRKDC-206ENST00000536429 NSMFQ6X4W1 530 aa15.38■□□□□ 0.05
PRKDC-206ENST00000536429 LRRC2Q9BYS8 371 aa15.38■□□□□ 0.05
PRKDC-206ENST00000536429 JMJD4Q9H9V9 463 aa15.38■□□□□ 0.05
PRKDC-206ENST00000536429 LY9Q9HBG7 655 aa15.38■□□□□ 0.05
PRKDC-206ENST00000536429 VAT1LQ9HCJ6 419 aa15.38■□□□□ 0.05
PRKDC-206ENST00000536429 CYP39A1Q9NYL5 469 aa15.38■□□□□ 0.05
PRKDC-206ENST00000536429 ERICH2A1L162 156 aa15.37■□□□□ 0.05
PRKDC-206ENST00000536429 PALM3A6NDB9 673 aaPredicted RBP15.37■□□□□ 0.05
PRKDC-206ENST00000536429 SH2B2O14492 632 aaPredicted RBP15.37■□□□□ 0.05
PRKDC-206ENST00000536429 TROAPQ12815 778 aa15.37■□□□□ 0.05
PRKDC-206ENST00000536429 GRM4Q14833 912 aa15.37■□□□□ 0.05
PRKDC-206ENST00000536429 MAMDC4Q6UXC1 1216 aa15.37■□□□□ 0.05
PRKDC-206ENST00000536429 SLC30A10Q6XR72 485 aa15.37■□□□□ 0.05
PRKDC-206ENST00000536429 ZNF467Q7Z7K2 595 aaPredicted RBP15.37■□□□□ 0.05
PRKDC-206ENST00000536429 ANKLE1Q8NAG6 615 aa15.37■□□□□ 0.05
PRKDC-206ENST00000536429 MYL10Q9BUA6 226 aa15.37■□□□□ 0.05
PRKDC-206ENST00000536429 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.37■□□□□ 0.05
PRKDC-206ENST00000536429 SMCHD1A6NHR9 2005 aa15.37■□□□□ 0.05
PRKDC-206ENST00000536429 PFASO15067 1338 aa15.37■□□□□ 0.05
PRKDC-206ENST00000536429 WDR19Q8NEZ3 1342 aa15.37■□□□□ 0.05
PRKDC-206ENST00000536429 DNAH12Q6ZR08 3092 aa15.37■□□□□ 0.05
PRKDC-206ENST00000536429 KLRF2D3W0D1 207 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms