RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 HMX1Q9NP08 348 aaPredicted RBP20.43■□□□□ 0.86
NXF1-217ENST00000533671 CCPG1Q9ULG6 757 aa20.43■□□□□ 0.86
NXF1-217ENST00000533671 HOXC6P09630 235 aa20.42■□□□□ 0.86
NXF1-217ENST00000533671 ANTXR2P58335 489 aa20.42■□□□□ 0.86
NXF1-217ENST00000533671 TRIM32Q13049 653 aa20.42■□□□□ 0.86
NXF1-217ENST00000533671 TKFCQ3LXA3 575 aa20.42■□□□□ 0.86
NXF1-217ENST00000533671 TMEM87BQ96K49 555 aa20.42■□□□□ 0.86
NXF1-217ENST00000533671 NEK1Q96PY6 1258 aa20.42■□□□□ 0.86
NXF1-217ENST00000533671 RANBP17Q9H2T7 1088 aaKnown RBP20.42■□□□□ 0.86
NXF1-217ENST00000533671 ACAD9Q9H845 621 aa20.42■□□□□ 0.86
NXF1-217ENST00000533671 COBLO75128 1261 aa20.41■□□□□ 0.86
NXF1-217ENST00000533671 PGK2P07205 417 aa20.41■□□□□ 0.86
NXF1-217ENST00000533671 PRKAR2AP13861 404 aaKnown RBP20.41■□□□□ 0.86
NXF1-217ENST00000533671 TMTC2Q8N394 836 aa20.41■□□□□ 0.86
NXF1-217ENST00000533671 IGDCC4Q8TDY8 1250 aa20.41■□□□□ 0.86
NXF1-217ENST00000533671 TRERF1Q96PN7 1200 aa20.41■□□□□ 0.86
NXF1-217ENST00000533671 MTA3Q9BTC8 594 aa20.41■□□□□ 0.86
NXF1-217ENST00000533671 RNF146Q9NTX7 359 aa20.41■□□□□ 0.86
NXF1-217ENST00000533671 PNMA2Q9UL42 364 aa20.41■□□□□ 0.86
NXF1-217ENST00000533671 RPTORQ8N122 1335 aa20.41■□□□□ 0.86
NXF1-217ENST00000533671 SMCHD1A6NHR9 2005 aa20.41■□□□□ 0.86
NXF1-217ENST00000533671 CCDC69A6NI79 296 aa20.4■□□□□ 0.86
NXF1-217ENST00000533671 ZNF536O15090 1300 aa20.4■□□□□ 0.86
NXF1-217ENST00000533671 ICAM1P05362 532 aa20.4■□□□□ 0.86
NXF1-217ENST00000533671 EN2P19622 333 aaPredicted RBP20.4■□□□□ 0.86
NXF1-217ENST00000533671 HTTP42858 3142 aa20.4■□□□□ 0.86
NXF1-217ENST00000533671 NUP133Q8WUM0 1156 aa20.4■□□□□ 0.86
NXF1-217ENST00000533671 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.4■□□□□ 0.86
NXF1-217ENST00000533671 CPVLQ9H3G5 476 aa20.4■□□□□ 0.86
NXF1-217ENST00000533671 VAT1LQ9HCJ6 419 aa20.4■□□□□ 0.86
NXF1-217ENST00000533671 GJB1P08034 283 aa20.39■□□□□ 0.85
NXF1-217ENST00000533671 CACNB2Q08289 660 aaPredicted RBP20.39■□□□□ 0.85
NXF1-217ENST00000533671 RASEFQ8IZ41 740 aa20.39■□□□□ 0.85
NXF1-217ENST00000533671 SENP2Q9HC62 589 aa20.39■□□□□ 0.85
NXF1-217ENST00000533671 FLRT1Q9NZU1 646 aa20.39■□□□□ 0.85
NXF1-217ENST00000533671 KLRF2D3W0D1 207 aa20.38■□□□□ 0.85
NXF1-217ENST00000533671 TFRCP02786 760 aaKnown RBP20.38■□□□□ 0.85
NXF1-217ENST00000533671 HMGB1P09429 215 aaKnown RBP20.38■□□□□ 0.85
NXF1-217ENST00000533671 CNGA1P29973 690 aa20.38■□□□□ 0.85
NXF1-217ENST00000533671 HSPA4P34932 840 aa20.38■□□□□ 0.85
NXF1-217ENST00000533671 RGS19P49795 217 aa20.38■□□□□ 0.85
NXF1-217ENST00000533671 MLLT1Q03111 559 aaPredicted RBP20.38■□□□□ 0.85
NXF1-217ENST00000533671 TSGA10IPQ3SY00 556 aa20.38■□□□□ 0.85
NXF1-217ENST00000533671 OLFML2BQ68BL8 750 aa20.38■□□□□ 0.85
NXF1-217ENST00000533671 ADGRF4Q8IZF3 695 aa20.38■□□□□ 0.85
NXF1-217ENST00000533671 MAML3Q96JK9 1138 aa20.38■□□□□ 0.85
NXF1-217ENST00000533671 DEFB118Q96PH6 123 aa20.38■□□□□ 0.85
NXF1-217ENST00000533671 LRRC2Q9BYS8 371 aa20.38■□□□□ 0.85
NXF1-217ENST00000533671 LY9Q9HBG7 655 aa20.38■□□□□ 0.85
NXF1-217ENST00000533671 DIS3Q9Y2L1 958 aaKnown RBP20.38■□□□□ 0.85
NXF1-217ENST00000533671 SH2B2O14492 632 aaPredicted RBP20.37■□□□□ 0.85
NXF1-217ENST00000533671 CYP2C19P33261 490 aa20.37■□□□□ 0.85
NXF1-217ENST00000533671 GJA8P48165 433 aa20.37■□□□□ 0.85
NXF1-217ENST00000533671 FGD1P98174 961 aa20.37■□□□□ 0.85
NXF1-217ENST00000533671 GRM4Q14833 912 aa20.37■□□□□ 0.85
NXF1-217ENST00000533671 CDC37Q16543 378 aaPredicted RBP20.37■□□□□ 0.85
NXF1-217ENST00000533671 ADCK5Q3MIX3 580 aa20.37■□□□□ 0.85
NXF1-217ENST00000533671 NSMFQ6X4W1 530 aa20.37■□□□□ 0.85
NXF1-217ENST00000533671 SYNE3Q6ZMZ3 975 aa20.37■□□□□ 0.85
NXF1-217ENST00000533671 DHX32Q7L7V1 743 aaKnown RBP20.37■□□□□ 0.85
NXF1-217ENST00000533671 ZNF654Q8IZM8 581 aa20.37■□□□□ 0.85
NXF1-217ENST00000533671 STAG2Q8N3U4 1231 aa20.37■□□□□ 0.85
NXF1-217ENST00000533671 CTCFLQ8NI51 663 aaPredicted RBP20.37■□□□□ 0.85
NXF1-217ENST00000533671 U2AF1L4Q8WU68 220 aaKnown RBP20.37■□□□□ 0.85
NXF1-217ENST00000533671 GPHNQ9NQX3 736 aaPredicted RBP20.37■□□□□ 0.85
NXF1-217ENST00000533671 MAD2L2Q9UI95 211 aa20.37■□□□□ 0.85
NXF1-217ENST00000533671 PFASO15067 1338 aa20.36■□□□□ 0.85
NXF1-217ENST00000533671 CENPFP49454 3210 aa20.36■□□□□ 0.85
NXF1-217ENST00000533671 POTEB2H3BUK9 544 aa20.36■□□□□ 0.85
NXF1-217ENST00000533671 EPB41L2O43491 1005 aaKnown RBP20.36■□□□□ 0.85
NXF1-217ENST00000533671 SGPL1O95470 568 aa20.36■□□□□ 0.85
NXF1-217ENST00000533671 ZNF792Q3KQV3 632 aa20.36■□□□□ 0.85
NXF1-217ENST00000533671 USH1GQ495M9 461 aa20.36■□□□□ 0.85
NXF1-217ENST00000533671 MAP3K21Q5TCX8 1036 aa20.36■□□□□ 0.85
NXF1-217ENST00000533671 JAKMIP1Q96N16 626 aaKnown RBP20.36■□□□□ 0.85
NXF1-217ENST00000533671 PAK6Q9NQU5 681 aaPredicted RBP20.36■□□□□ 0.85
NXF1-217ENST00000533671 SLC12A7Q9Y666 1083 aa20.36■□□□□ 0.85
NXF1-217ENST00000533671 BAZ2BQ9UIF8 2168 aaKnown RBP20.36■□□□□ 0.85
NXF1-217ENST00000533671 PALM3A6NDB9 673 aaPredicted RBP20.35■□□□□ 0.85
NXF1-217ENST00000533671 EIF5BO60841 1220 aaKnown RBP20.35■□□□□ 0.85
NXF1-217ENST00000533671 DDAH1O94760 285 aa20.35■□□□□ 0.85
NXF1-217ENST00000533671 TAL1P17542 331 aaPredicted RBP20.35■□□□□ 0.85
NXF1-217ENST00000533671 CCND3P30281 292 aaPredicted RBP20.35■□□□□ 0.85
NXF1-217ENST00000533671 KIF5BP33176 963 aa20.35■□□□□ 0.85
NXF1-217ENST00000533671 LIFRP42702 1097 aa20.35■□□□□ 0.85
NXF1-217ENST00000533671 TROAPQ12815 778 aa20.35■□□□□ 0.85
NXF1-217ENST00000533671 MUM1L1Q5H9M0 696 aa20.35■□□□□ 0.85
NXF1-217ENST00000533671 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.35■□□□□ 0.85
NXF1-217ENST00000533671 MYL10Q9BUA6 226 aa20.35■□□□□ 0.85
NXF1-217ENST00000533671 A1CFQ9NQ94 594 aaKnown RBP20.35■□□□□ 0.85
NXF1-217ENST00000533671 SNX14Q9Y5W7 946 aa20.35■□□□□ 0.85
NXF1-217ENST00000533671 WDR19Q8NEZ3 1342 aa20.34■□□□□ 0.85
NXF1-217ENST00000533671 MCM3APO60318 1980 aa20.34■□□□□ 0.85
NXF1-217ENST00000533671 CALM1P0DP23 149 aa20.34■□□□□ 0.85
NXF1-217ENST00000533671 CALM2P0DP24 149 aa20.34■□□□□ 0.85
NXF1-217ENST00000533671 CALM3P0DP25 149 aa20.34■□□□□ 0.85
NXF1-217ENST00000533671 PSMA5P28066 241 aa20.34■□□□□ 0.85
NXF1-217ENST00000533671 BLOC1S2Q6QNY1 142 aa20.34■□□□□ 0.85
NXF1-217ENST00000533671 FBXO11Q86XK2 927 aa20.34■□□□□ 0.85
NXF1-217ENST00000533671 TCEANC2Q96MN5 208 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms