RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 MFSD14CQ5VZR4 134 aa19.72■□□□□ 0.75
HIF3A-211ENST00000528563 IGDCC4Q8TDY8 1250 aa19.72■□□□□ 0.75
HIF3A-211ENST00000528563 SHISA4Q96DD7 197 aa19.72■□□□□ 0.75
HIF3A-211ENST00000528563 DEFB118Q96PH6 123 aa19.72■□□□□ 0.75
HIF3A-211ENST00000528563 RANBP17Q9H2T7 1088 aaKnown RBP19.72■□□□□ 0.75
HIF3A-211ENST00000528563 FBXO40Q9UH90 709 aa19.72■□□□□ 0.75
HIF3A-211ENST00000528563 DIS3Q9Y2L1 958 aaKnown RBP19.72■□□□□ 0.75
HIF3A-211ENST00000528563 DNAJC25-GNG10A0A024R161 153 aa19.71■□□□□ 0.75
HIF3A-211ENST00000528563 IFIT3O14879 490 aaKnown RBP19.71■□□□□ 0.75
HIF3A-211ENST00000528563 GOLGA8HP0CJ92 632 aa19.71■□□□□ 0.75
HIF3A-211ENST00000528563 TKFCQ3LXA3 575 aa19.71■□□□□ 0.75
HIF3A-211ENST00000528563 CHST3Q7LGC8 479 aa19.71■□□□□ 0.75
HIF3A-211ENST00000528563 MAML3Q96JK9 1138 aa19.71■□□□□ 0.75
HIF3A-211ENST00000528563 CRISPLD2Q9H0B8 497 aa19.71■□□□□ 0.75
HIF3A-211ENST00000528563 PDE4DIPQ5VU43 2346 aa19.7■□□□□ 0.74
HIF3A-211ENST00000528563 ICAM1P05362 532 aa19.7■□□□□ 0.74
HIF3A-211ENST00000528563 CAPN2P17655 700 aa19.7■□□□□ 0.74
HIF3A-211ENST00000528563 CYP2C19P33261 490 aa19.7■□□□□ 0.74
HIF3A-211ENST00000528563 COL9A3Q14050 684 aaPredicted RBP19.7■□□□□ 0.74
HIF3A-211ENST00000528563 TSGA10IPQ3SY00 556 aa19.7■□□□□ 0.74
HIF3A-211ENST00000528563 CCDC174Q6PII3 467 aa19.7■□□□□ 0.74
HIF3A-211ENST00000528563 MTA3Q9BTC8 594 aa19.7■□□□□ 0.74
HIF3A-211ENST00000528563 UBA5Q9GZZ9 404 aa19.7■□□□□ 0.74
HIF3A-211ENST00000528563 SENP2Q9HC62 589 aa19.7■□□□□ 0.74
HIF3A-211ENST00000528563 SART3Q15020 963 aaKnown RBP19.69■□□□□ 0.74
HIF3A-211ENST00000528563 ASPRV1Q53RT3 343 aa19.69■□□□□ 0.74
HIF3A-211ENST00000528563 RNF20Q5VTR2 975 aa19.69■□□□□ 0.74
HIF3A-211ENST00000528563 DDX11Q96FC9 970 aa19.69■□□□□ 0.74
HIF3A-211ENST00000528563 TRERF1Q96PN7 1200 aa19.69■□□□□ 0.74
HIF3A-211ENST00000528563 ERICH2A1L162 156 aa19.68■□□□□ 0.74
HIF3A-211ENST00000528563 TNRC18O15417 2968 aaPredicted RBP19.68■□□□□ 0.74
HIF3A-211ENST00000528563 TFRCP02786 760 aaKnown RBP19.68■□□□□ 0.74
HIF3A-211ENST00000528563 PARP1P09874 1014 aaKnown RBP19.68■□□□□ 0.74
HIF3A-211ENST00000528563 ALAS1P13196 640 aa19.68■□□□□ 0.74
HIF3A-211ENST00000528563 CCND3P30281 292 aaPredicted RBP19.68■□□□□ 0.74
HIF3A-211ENST00000528563 WTAPQ15007 396 aa19.68■□□□□ 0.74
HIF3A-211ENST00000528563 TMEM67Q5HYA8 995 aa19.68■□□□□ 0.74
HIF3A-211ENST00000528563 CPVLQ9H3G5 476 aa19.68■□□□□ 0.74
HIF3A-211ENST00000528563 ACAD9Q9H845 621 aa19.68■□□□□ 0.74
HIF3A-211ENST00000528563 HOMER2Q9NSB8 354 aa19.68■□□□□ 0.74
HIF3A-211ENST00000528563 RNF146Q9NTX7 359 aa19.68■□□□□ 0.74
HIF3A-211ENST00000528563 BRCA2P51587 3418 aa19.68■□□□□ 0.74
HIF3A-211ENST00000528563 SMCHD1A6NHR9 2005 aa19.67■□□□□ 0.74
HIF3A-211ENST00000528563 MCM5P33992 734 aa19.67■□□□□ 0.74
HIF3A-211ENST00000528563 UBE2Q1Q7Z7E8 422 aa19.67■□□□□ 0.74
HIF3A-211ENST00000528563 RASEFQ8IZ41 740 aa19.67■□□□□ 0.74
HIF3A-211ENST00000528563 ANKRD35Q8N283 1001 aa19.67■□□□□ 0.74
HIF3A-211ENST00000528563 TRPV1Q8NER1 839 aa19.67■□□□□ 0.74
HIF3A-211ENST00000528563 CCPG1Q9ULG6 757 aa19.67■□□□□ 0.74
HIF3A-211ENST00000528563 PALM3A6NDB9 673 aaPredicted RBP19.67■□□□□ 0.74
HIF3A-211ENST00000528563 PRC1O43663 620 aa19.67■□□□□ 0.74
HIF3A-211ENST00000528563 CYBAP13498 195 aa19.67■□□□□ 0.74
HIF3A-211ENST00000528563 TROAPQ12815 778 aa19.67■□□□□ 0.74
HIF3A-211ENST00000528563 MUM1L1Q5H9M0 696 aa19.67■□□□□ 0.74
HIF3A-211ENST00000528563 LHX8Q68G74 356 aa19.67■□□□□ 0.74
HIF3A-211ENST00000528563 ADGRF4Q8IZF3 695 aa19.67■□□□□ 0.74
HIF3A-211ENST00000528563 STAG2Q8N3U4 1231 aa19.67■□□□□ 0.74
HIF3A-211ENST00000528563 KCNB2Q92953 911 aa19.67■□□□□ 0.74
HIF3A-211ENST00000528563 TINF2Q9BSI4 451 aa19.67■□□□□ 0.74
HIF3A-211ENST00000528563 GPHNQ9NQX3 736 aaPredicted RBP19.67■□□□□ 0.74
HIF3A-211ENST00000528563 MAD2L2Q9UI95 211 aa19.67■□□□□ 0.74
HIF3A-211ENST00000528563 PNMA2Q9UL42 364 aa19.67■□□□□ 0.74
HIF3A-211ENST00000528563 TMEM87BQ96K49 555 aa19.66■□□□□ 0.74
HIF3A-211ENST00000528563 LY9Q9HBG7 655 aa19.66■□□□□ 0.74
HIF3A-211ENST00000528563 A1CFQ9NQ94 594 aaKnown RBP19.66■□□□□ 0.74
HIF3A-211ENST00000528563 KLRF2D3W0D1 207 aa19.65■□□□□ 0.74
HIF3A-211ENST00000528563 PRAMEF19Q5SWL8 479 aa19.65■□□□□ 0.74
HIF3A-211ENST00000528563 MAMDC4Q6UXC1 1216 aa19.65■□□□□ 0.74
HIF3A-211ENST00000528563 ZNF467Q7Z7K2 595 aaPredicted RBP19.65■□□□□ 0.74
HIF3A-211ENST00000528563 TMTC2Q8N394 836 aa19.65■□□□□ 0.74
HIF3A-211ENST00000528563 MSL3Q8N5Y2 521 aaKnown RBP19.65■□□□□ 0.74
HIF3A-211ENST00000528563 FAM133AQ8N9E0 248 aa19.65■□□□□ 0.74
HIF3A-211ENST00000528563 FGD4Q96M96 766 aa19.65■□□□□ 0.74
HIF3A-211ENST00000528563 JMJD4Q9H9V9 463 aa19.65■□□□□ 0.74
HIF3A-211ENST00000528563 OGDHLQ9ULD0 1010 aa19.65■□□□□ 0.74
HIF3A-211ENST00000528563 WDR19Q8NEZ3 1342 aa19.65■□□□□ 0.74
HIF3A-211ENST00000528563 REC8O95072 547 aa19.64■□□□□ 0.73
HIF3A-211ENST00000528563 TAL1P17542 331 aaPredicted RBP19.64■□□□□ 0.73
HIF3A-211ENST00000528563 EXOSC10Q01780 885 aaKnown RBP19.64■□□□□ 0.73
HIF3A-211ENST00000528563 CNTN2Q02246 1040 aa19.64■□□□□ 0.73
HIF3A-211ENST00000528563 GRM4Q14833 912 aa19.64■□□□□ 0.73
HIF3A-211ENST00000528563 ADCK5Q3MIX3 580 aa19.64■□□□□ 0.73
HIF3A-211ENST00000528563 NEK1Q96PY6 1258 aa19.64■□□□□ 0.73
HIF3A-211ENST00000528563 NRBP1Q9UHY1 535 aa19.64■□□□□ 0.73
HIF3A-211ENST00000528563 PLXNA1Q9UIW2 1896 aa19.63■□□□□ 0.73
HIF3A-211ENST00000528563 SH2B2O14492 632 aaPredicted RBP19.63■□□□□ 0.73
HIF3A-211ENST00000528563 HSPA4P34932 840 aa19.63■□□□□ 0.73
HIF3A-211ENST00000528563 LIFRP42702 1097 aa19.63■□□□□ 0.73
HIF3A-211ENST00000528563 CATIPQ7Z7H3 387 aa19.63■□□□□ 0.73
HIF3A-211ENST00000528563 CLEC4DQ8WXI8 215 aa19.63■□□□□ 0.73
HIF3A-211ENST00000528563 VAT1LQ9HCJ6 419 aa19.63■□□□□ 0.73
HIF3A-211ENST00000528563 CYP39A1Q9NYL5 469 aa19.63■□□□□ 0.73
HIF3A-211ENST00000528563 PFASO15067 1338 aa19.63■□□□□ 0.73
HIF3A-211ENST00000528563 POTEB2H3BUK9 544 aa19.62■□□□□ 0.73
HIF3A-211ENST00000528563 SNAI1O95863 264 aaPredicted RBP19.62■□□□□ 0.73
HIF3A-211ENST00000528563 CNGA1P29973 690 aa19.62■□□□□ 0.73
HIF3A-211ENST00000528563 MNX1P50219 401 aaPredicted RBP19.62■□□□□ 0.73
HIF3A-211ENST00000528563 KRT32Q14532 448 aa19.62■□□□□ 0.73
HIF3A-211ENST00000528563 SLC35G1Q2M3R5 365 aa19.62■□□□□ 0.73
HIF3A-211ENST00000528563 ANKLE1Q8NAG6 615 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms