RNA–Protein interactions for RNA: ENST00000526195.5

CTSB-210, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-210ENST00000526195 UBAC1Q9BSL1 405 aa18.94■□□□□ 0.62
CTSB-210ENST00000526195 RANBP17Q9H2T7 1088 aaKnown RBP18.94■□□□□ 0.62
CTSB-210ENST00000526195 KAT14Q9H8E8 782 aa18.94■□□□□ 0.62
CTSB-210ENST00000526195 OGDHLQ9ULD0 1010 aa18.94■□□□□ 0.62
CTSB-210ENST00000526195 DNAJC25-GNG10A0A024R161 153 aa18.93■□□□□ 0.62
CTSB-210ENST00000526195 CNGA1P29973 690 aa18.93■□□□□ 0.62
CTSB-210ENST00000526195 MNX1P50219 401 aaPredicted RBP18.93■□□□□ 0.62
CTSB-210ENST00000526195 TRDNQ13061 729 aa18.93■□□□□ 0.62
CTSB-210ENST00000526195 PRAMEF19Q5SWL8 479 aa18.93■□□□□ 0.62
CTSB-210ENST00000526195 KIAA1211Q6ZU35 1233 aa18.93■□□□□ 0.62
CTSB-210ENST00000526195 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.93■□□□□ 0.62
CTSB-210ENST00000526195 DDX11Q96FC9 970 aa18.93■□□□□ 0.62
CTSB-210ENST00000526195 RNF146Q9NTX7 359 aa18.93■□□□□ 0.62
CTSB-210ENST00000526195 FBXO40Q9UH90 709 aa18.93■□□□□ 0.62
CTSB-210ENST00000526195 DIS3Q9Y2L1 958 aaKnown RBP18.93■□□□□ 0.62
CTSB-210ENST00000526195 ALAS1P13196 640 aa18.92■□□□□ 0.62
CTSB-210ENST00000526195 SEC23AQ15436 765 aa18.92■□□□□ 0.62
CTSB-210ENST00000526195 ANKRD35Q8N283 1001 aa18.92■□□□□ 0.62
CTSB-210ENST00000526195 PAWRQ96IZ0 340 aaKnown RBP18.92■□□□□ 0.62
CTSB-210ENST00000526195 TRERF1Q96PN7 1200 aa18.92■□□□□ 0.62
CTSB-210ENST00000526195 TINF2Q9BSI4 451 aa18.92■□□□□ 0.62
CTSB-210ENST00000526195 CPVLQ9H3G5 476 aa18.92■□□□□ 0.62
CTSB-210ENST00000526195 ACAD9Q9H845 621 aa18.92■□□□□ 0.62
CTSB-210ENST00000526195 DDX20Q9UHI6 824 aaKnown RBP18.92■□□□□ 0.62
CTSB-210ENST00000526195 ZNFX1Q9P2E3 1918 aaKnown RBP18.92■□□□□ 0.62
CTSB-210ENST00000526195 ICAM1P05362 532 aa18.91■□□□□ 0.62
CTSB-210ENST00000526195 CAPN2P17655 700 aa18.91■□□□□ 0.62
CTSB-210ENST00000526195 MUM1L1Q5H9M0 696 aa18.91■□□□□ 0.62
CTSB-210ENST00000526195 IFIT1BQ5T764 474 aaKnown RBP18.91■□□□□ 0.62
CTSB-210ENST00000526195 CHST3Q7LGC8 479 aa18.91■□□□□ 0.62
CTSB-210ENST00000526195 ANKLE1Q8NAG6 615 aa18.91■□□□□ 0.62
CTSB-210ENST00000526195 NCOA7Q8NI08 942 aa18.91■□□□□ 0.62
CTSB-210ENST00000526195 FGD4Q96M96 766 aa18.91■□□□□ 0.62
CTSB-210ENST00000526195 UBA5Q9GZZ9 404 aa18.91■□□□□ 0.62
CTSB-210ENST00000526195 ANO2Q9NQ90 1003 aa18.91■□□□□ 0.62
CTSB-210ENST00000526195 CCPG1Q9ULG6 757 aa18.91■□□□□ 0.62
CTSB-210ENST00000526195 CEP290O15078 2479 aa18.91■□□□□ 0.62
CTSB-210ENST00000526195 TKFCQ3LXA3 575 aa18.9■□□□□ 0.62
CTSB-210ENST00000526195 GPATCH4Q5T3I0 446 aaKnown RBP18.9■□□□□ 0.62
CTSB-210ENST00000526195 PRPF38BQ5VTL8 546 aaKnown RBP18.9■□□□□ 0.62
CTSB-210ENST00000526195 RALYLQ86SE5 291 aaKnown RBP18.9■□□□□ 0.62
CTSB-210ENST00000526195 SENP2Q9HC62 589 aa18.9■□□□□ 0.62
CTSB-210ENST00000526195 A1CFQ9NQ94 594 aaKnown RBP18.9■□□□□ 0.62
CTSB-210ENST00000526195 SLC27A2O14975 620 aa18.89■□□□□ 0.61
CTSB-210ENST00000526195 CDC45O75419 566 aa18.89■□□□□ 0.61
CTSB-210ENST00000526195 CENPBP07199 599 aaPredicted RBP18.89■□□□□ 0.61
CTSB-210ENST00000526195 ANTXR2P58335 489 aa18.89■□□□□ 0.61
CTSB-210ENST00000526195 COL9A3Q14050 684 aaPredicted RBP18.89■□□□□ 0.61
CTSB-210ENST00000526195 ANO1Q5XXA6 986 aa18.89■□□□□ 0.61
CTSB-210ENST00000526195 MB21D2Q8IYB1 491 aaPredicted RBP18.89■□□□□ 0.61
CTSB-210ENST00000526195 IFIT3O14879 490 aaKnown RBP18.88■□□□□ 0.61
CTSB-210ENST00000526195 SEPT4O43236 478 aa18.88■□□□□ 0.61
CTSB-210ENST00000526195 CNTN2Q02246 1040 aa18.88■□□□□ 0.61
CTSB-210ENST00000526195 NECTIN1Q15223 517 aa18.88■□□□□ 0.61
CTSB-210ENST00000526195 CREB3L3Q68CJ9 461 aa18.88■□□□□ 0.61
CTSB-210ENST00000526195 NECAB2Q7Z6G3 386 aa18.88■□□□□ 0.61
CTSB-210ENST00000526195 SMCHD1A6NHR9 2005 aa18.87■□□□□ 0.61
CTSB-210ENST00000526195 MSCO60682 206 aa18.87■□□□□ 0.61
CTSB-210ENST00000526195 SNAI1O95863 264 aaPredicted RBP18.87■□□□□ 0.61
CTSB-210ENST00000526195 PARP1P09874 1014 aaKnown RBP18.87■□□□□ 0.61
CTSB-210ENST00000526195 ZNF865P0CJ78 1059 aaPredicted RBP18.87■□□□□ 0.61
CTSB-210ENST00000526195 RANBP2P49792 3224 aaKnown RBP18.87■□□□□ 0.61
CTSB-210ENST00000526195 ASPRV1Q53RT3 343 aa18.87■□□□□ 0.61
CTSB-210ENST00000526195 MAMDC4Q6UXC1 1216 aa18.87■□□□□ 0.61
CTSB-210ENST00000526195 ZNF467Q7Z7K2 595 aaPredicted RBP18.87■□□□□ 0.61
CTSB-210ENST00000526195 STAG2Q8N3U4 1231 aa18.87■□□□□ 0.61
CTSB-210ENST00000526195 FAM133AQ8N9E0 248 aa18.87■□□□□ 0.61
CTSB-210ENST00000526195 DPF3Q92784 378 aa18.87■□□□□ 0.61
CTSB-210ENST00000526195 HTATIP2Q9BUP3 242 aa18.87■□□□□ 0.61
CTSB-210ENST00000526195 PPP4R2Q9NY27 417 aa18.87■□□□□ 0.61
CTSB-210ENST00000526195 PLXNA1Q9UIW2 1896 aa18.87■□□□□ 0.61
CTSB-210ENST00000526195 PFASO15067 1338 aa18.86■□□□□ 0.61
CTSB-210ENST00000526195 SYNGAP1Q96PV0 1343 aa18.86■□□□□ 0.61
CTSB-210ENST00000526195 POTEB2H3BUK9 544 aa18.86■□□□□ 0.61
CTSB-210ENST00000526195 NFIBO00712 420 aa18.86■□□□□ 0.61
CTSB-210ENST00000526195 CASC1Q6TDU7 716 aa18.86■□□□□ 0.61
CTSB-210ENST00000526195 ADGRF4Q8IZF3 695 aa18.86■□□□□ 0.61
CTSB-210ENST00000526195 MSL3Q8N5Y2 521 aaKnown RBP18.86■□□□□ 0.61
CTSB-210ENST00000526195 C11orf49Q9H6J7 331 aa18.86■□□□□ 0.61
CTSB-210ENST00000526195 GPHNQ9NQX3 736 aaPredicted RBP18.86■□□□□ 0.61
CTSB-210ENST00000526195 CYP39A1Q9NYL5 469 aa18.86■□□□□ 0.61
CTSB-210ENST00000526195 NRBP1Q9UHY1 535 aa18.86■□□□□ 0.61
CTSB-210ENST00000526195 ASTN1O14525 1302 aa18.85■□□□□ 0.61
CTSB-210ENST00000526195 ERICH2A1L162 156 aa18.85■□□□□ 0.61
CTSB-210ENST00000526195 SOWAHBA6NEL2 793 aa18.85■□□□□ 0.61
CTSB-210ENST00000526195 COL6A1P12109 1028 aa18.85■□□□□ 0.61
CTSB-210ENST00000526195 WTAPQ15007 396 aa18.85■□□□□ 0.61
CTSB-210ENST00000526195 CDC37Q16543 378 aaPredicted RBP18.85■□□□□ 0.61
CTSB-210ENST00000526195 TMEM67Q5HYA8 995 aa18.85■□□□□ 0.61
CTSB-210ENST00000526195 NSMFQ6X4W1 530 aa18.85■□□□□ 0.61
CTSB-210ENST00000526195 IGDCC4Q8TDY8 1250 aa18.85■□□□□ 0.61
CTSB-210ENST00000526195 CLEC4DQ8WXI8 215 aa18.85■□□□□ 0.61
CTSB-210ENST00000526195 PURBQ96QR8 312 aaKnown RBP18.85■□□□□ 0.61
CTSB-210ENST00000526195 MAD2L2Q9UI95 211 aa18.85■□□□□ 0.61
CTSB-210ENST00000526195 CNPY2Q9Y2B0 182 aa18.85■□□□□ 0.61
CTSB-210ENST00000526195 DDX49Q9Y6V7 483 aaKnown RBP18.85■□□□□ 0.61
CTSB-210ENST00000526195 WDR19Q8NEZ3 1342 aa18.84■□□□□ 0.61
CTSB-210ENST00000526195 SART3Q15020 963 aaKnown RBP18.84■□□□□ 0.61
CTSB-210ENST00000526195 ARMCX2Q7L311 632 aa18.84■□□□□ 0.61
CTSB-210ENST00000526195 CCDC144CPQ8IYA2 1237 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms