RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 NUP133Q8WUM0 1156 aa17■□□□□ 0.31
TOP1MT-203ENST00000517857 AGBL1Q96MI9 1066 aa17■□□□□ 0.31
TOP1MT-203ENST00000517857 MTA3Q9BTC8 594 aa17■□□□□ 0.31
TOP1MT-203ENST00000517857 LY9Q9HBG7 655 aa17■□□□□ 0.31
TOP1MT-203ENST00000517857 GPHNQ9NQX3 736 aaPredicted RBP17■□□□□ 0.31
TOP1MT-203ENST00000517857 RNF146Q9NTX7 359 aa17■□□□□ 0.31
TOP1MT-203ENST00000517857 SLC5A4Q9NY91 659 aa17■□□□□ 0.31
TOP1MT-203ENST00000517857 FBXO40Q9UH90 709 aa17■□□□□ 0.31
TOP1MT-203ENST00000517857 ZNF536O15090 1300 aa16.99■□□□□ 0.31
TOP1MT-203ENST00000517857 COL9A3Q14050 684 aaPredicted RBP16.99■□□□□ 0.31
TOP1MT-203ENST00000517857 MTFR1Q15390 333 aa16.99■□□□□ 0.31
TOP1MT-203ENST00000517857 TSGA10IPQ3SY00 556 aa16.99■□□□□ 0.31
TOP1MT-203ENST00000517857 ZNF654Q8IZM8 581 aa16.99■□□□□ 0.31
TOP1MT-203ENST00000517857 CHST13Q8NET6 341 aa16.99■□□□□ 0.31
TOP1MT-203ENST00000517857 NPLOC4Q8TAT6 608 aa16.99■□□□□ 0.31
TOP1MT-203ENST00000517857 DDX11Q96FC9 970 aa16.99■□□□□ 0.31
TOP1MT-203ENST00000517857 TCEANC2Q96MN5 208 aa16.99■□□□□ 0.31
TOP1MT-203ENST00000517857 JAKMIP1Q96N16 626 aaKnown RBP16.99■□□□□ 0.31
TOP1MT-203ENST00000517857 ACAD9Q9H845 621 aa16.99■□□□□ 0.31
TOP1MT-203ENST00000517857 SNX14Q9Y5W7 946 aa16.99■□□□□ 0.31
TOP1MT-203ENST00000517857 EPB41L2O43491 1005 aaKnown RBP16.98■□□□□ 0.31
TOP1MT-203ENST00000517857 ICAM1P05362 532 aa16.98■□□□□ 0.31
TOP1MT-203ENST00000517857 PGK2P07205 417 aa16.98■□□□□ 0.31
TOP1MT-203ENST00000517857 HMGB1P09429 215 aaKnown RBP16.98■□□□□ 0.31
TOP1MT-203ENST00000517857 CCL5P13501 91 aa16.98■□□□□ 0.31
TOP1MT-203ENST00000517857 TAL1P17542 331 aaPredicted RBP16.98■□□□□ 0.31
TOP1MT-203ENST00000517857 FGD1P98174 961 aa16.98■□□□□ 0.31
TOP1MT-203ENST00000517857 GRM4Q14833 912 aa16.98■□□□□ 0.31
TOP1MT-203ENST00000517857 CDC37Q16543 378 aaPredicted RBP16.98■□□□□ 0.31
TOP1MT-203ENST00000517857 TKFCQ3LXA3 575 aa16.98■□□□□ 0.31
TOP1MT-203ENST00000517857 DHX32Q7L7V1 743 aaKnown RBP16.98■□□□□ 0.31
TOP1MT-203ENST00000517857 ANKRD35Q8N283 1001 aa16.98■□□□□ 0.31
TOP1MT-203ENST00000517857 TMTC2Q8N394 836 aa16.98■□□□□ 0.31
TOP1MT-203ENST00000517857 STAG2Q8N3U4 1231 aa16.98■□□□□ 0.31
TOP1MT-203ENST00000517857 CTCFLQ8NI51 663 aaPredicted RBP16.98■□□□□ 0.31
TOP1MT-203ENST00000517857 TRERF1Q96PN7 1200 aa16.98■□□□□ 0.31
TOP1MT-203ENST00000517857 MYL10Q9BUA6 226 aa16.98■□□□□ 0.31
TOP1MT-203ENST00000517857 VAT1LQ9HCJ6 419 aa16.98■□□□□ 0.31
TOP1MT-203ENST00000517857 HTTP42858 3142 aa16.98■□□□□ 0.31
TOP1MT-203ENST00000517857 SMCHD1A6NHR9 2005 aa16.97■□□□□ 0.31
TOP1MT-203ENST00000517857 WDR19Q8NEZ3 1342 aa16.97■□□□□ 0.31
TOP1MT-203ENST00000517857 KLRF2D3W0D1 207 aa16.97■□□□□ 0.31
TOP1MT-203ENST00000517857 COBLO75128 1261 aa16.97■□□□□ 0.31
TOP1MT-203ENST00000517857 DDAH1O94760 285 aa16.97■□□□□ 0.31
TOP1MT-203ENST00000517857 HOXC6P09630 235 aa16.97■□□□□ 0.31
TOP1MT-203ENST00000517857 PRKAR2AP13861 404 aaKnown RBP16.97■□□□□ 0.31
TOP1MT-203ENST00000517857 TRIM32Q13049 653 aa16.97■□□□□ 0.31
TOP1MT-203ENST00000517857 MFSD14CQ5VZR4 134 aa16.97■□□□□ 0.31
TOP1MT-203ENST00000517857 BLOC1S2Q6QNY1 142 aa16.97■□□□□ 0.31
TOP1MT-203ENST00000517857 ADGRF4Q8IZF3 695 aa16.97■□□□□ 0.31
TOP1MT-203ENST00000517857 KCNB2Q92953 911 aa16.97■□□□□ 0.31
TOP1MT-203ENST00000517857 RNF208Q9H0X6 261 aa16.97■□□□□ 0.31
TOP1MT-203ENST00000517857 UNC93B1Q9H1C4 597 aa16.97■□□□□ 0.31
TOP1MT-203ENST00000517857 MAD2L2Q9UI95 211 aa16.97■□□□□ 0.31
TOP1MT-203ENST00000517857 EIF5BO60841 1220 aaKnown RBP16.96■□□□□ 0.31
TOP1MT-203ENST00000517857 CPA1P15085 419 aa16.96■□□□□ 0.31
TOP1MT-203ENST00000517857 LIFRP42702 1097 aa16.96■□□□□ 0.31
TOP1MT-203ENST00000517857 TROAPQ12815 778 aa16.96■□□□□ 0.31
TOP1MT-203ENST00000517857 USH1GQ495M9 461 aa16.96■□□□□ 0.31
TOP1MT-203ENST00000517857 SYNE3Q6ZMZ3 975 aa16.96■□□□□ 0.31
TOP1MT-203ENST00000517857 RAB11FIP4Q86YS3 637 aa16.96■□□□□ 0.31
TOP1MT-203ENST00000517857 USP26Q9BXU7 913 aa16.96■□□□□ 0.31
TOP1MT-203ENST00000517857 FLRT1Q9NZU1 646 aa16.96■□□□□ 0.31
TOP1MT-203ENST00000517857 PNMA2Q9UL42 364 aa16.96■□□□□ 0.31
TOP1MT-203ENST00000517857 SLC12A7Q9Y666 1083 aa16.96■□□□□ 0.31
TOP1MT-203ENST00000517857 KIAA0100Q14667 2235 aaKnown RBP16.95■□□□□ 0.3
TOP1MT-203ENST00000517857 POTEFA5A3E0 1075 aa16.95■□□□□ 0.3
TOP1MT-203ENST00000517857 PALM3A6NDB9 673 aaPredicted RBP16.95■□□□□ 0.3
TOP1MT-203ENST00000517857 CALM1P0DP23 149 aa16.95■□□□□ 0.3
TOP1MT-203ENST00000517857 CALM2P0DP24 149 aa16.95■□□□□ 0.3
TOP1MT-203ENST00000517857 CALM3P0DP25 149 aa16.95■□□□□ 0.3
TOP1MT-203ENST00000517857 RXRAP19793 462 aa16.95■□□□□ 0.3
TOP1MT-203ENST00000517857 CASTP20810 708 aaKnown RBP16.95■□□□□ 0.3
TOP1MT-203ENST00000517857 PSMA5P28066 241 aa16.95■□□□□ 0.3
TOP1MT-203ENST00000517857 KIF5BP33176 963 aa16.95■□□□□ 0.3
TOP1MT-203ENST00000517857 MUM1L1Q5H9M0 696 aa16.95■□□□□ 0.3
TOP1MT-203ENST00000517857 NSMFQ6X4W1 530 aa16.95■□□□□ 0.3
TOP1MT-203ENST00000517857 MICU3Q86XE3 530 aa16.95■□□□□ 0.3
TOP1MT-203ENST00000517857 CCDC144CPQ8IYA2 1237 aa16.95■□□□□ 0.3
TOP1MT-203ENST00000517857 MAML3Q96JK9 1138 aa16.95■□□□□ 0.3
TOP1MT-203ENST00000517857 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.95■□□□□ 0.3
TOP1MT-203ENST00000517857 HMX1Q9NP08 348 aaPredicted RBP16.95■□□□□ 0.3
TOP1MT-203ENST00000517857 NAP1L2Q9ULW6 460 aaPredicted RBP16.95■□□□□ 0.3
TOP1MT-203ENST00000517857 CYP2C19P33261 490 aa16.94■□□□□ 0.3
TOP1MT-203ENST00000517857 QRICH1Q2TAL8 776 aa16.94■□□□□ 0.3
TOP1MT-203ENST00000517857 OLFML2BQ68BL8 750 aa16.94■□□□□ 0.3
TOP1MT-203ENST00000517857 HOMER1Q86YM7 354 aa16.94■□□□□ 0.3
TOP1MT-203ENST00000517857 JMJD4Q9H9V9 463 aa16.94■□□□□ 0.3
TOP1MT-203ENST00000517857 A1CFQ9NQ94 594 aaKnown RBP16.94■□□□□ 0.3
TOP1MT-203ENST00000517857 PFASO15067 1338 aa16.94■□□□□ 0.3
TOP1MT-203ENST00000517857 RPTORQ8N122 1335 aa16.94■□□□□ 0.3
TOP1MT-203ENST00000517857 BAZ2BQ9UIF8 2168 aaKnown RBP16.94■□□□□ 0.3
TOP1MT-203ENST00000517857 FRMPD3Q5JV73 1810 aa16.93■□□□□ 0.3
TOP1MT-203ENST00000517857 MCM3APO60318 1980 aa16.93■□□□□ 0.3
TOP1MT-203ENST00000517857 POTEB2H3BUK9 544 aa16.93■□□□□ 0.3
TOP1MT-203ENST00000517857 EXOSC10Q01780 885 aaKnown RBP16.93■□□□□ 0.3
TOP1MT-203ENST00000517857 CACNB2Q08289 660 aaPredicted RBP16.93■□□□□ 0.3
TOP1MT-203ENST00000517857 ZNF792Q3KQV3 632 aa16.93■□□□□ 0.3
TOP1MT-203ENST00000517857 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.93■□□□□ 0.3
TOP1MT-203ENST00000517857 SGMS1Q86VZ5 419 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms