RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.71■■□□□ 1.55
MTCL1-204ENST00000517554 RNF208Q9H0X6 261 aa24.71■■□□□ 1.55
MTCL1-204ENST00000517554 RBBP6Q7Z6E9 1792 aaKnown RBP24.71■■□□□ 1.55
MTCL1-204ENST00000517554 MCM5P33992 734 aa24.71■■□□□ 1.55
MTCL1-204ENST00000517554 HSPA4P34932 840 aa24.71■■□□□ 1.55
MTCL1-204ENST00000517554 CACNB2Q08289 660 aaPredicted RBP24.71■■□□□ 1.55
MTCL1-204ENST00000517554 TROAPQ12815 778 aa24.71■■□□□ 1.55
MTCL1-204ENST00000517554 TMEM106CQ9BVX2 250 aa24.71■■□□□ 1.55
MTCL1-204ENST00000517554 HOMER2Q9NSB8 354 aa24.71■■□□□ 1.55
MTCL1-204ENST00000517554 MAD2L2Q9UI95 211 aa24.71■■□□□ 1.55
MTCL1-204ENST00000517554 KCTD2Q14681 263 aa24.7■■□□□ 1.54
MTCL1-204ENST00000517554 SLC35G1Q2M3R5 365 aa24.7■■□□□ 1.54
MTCL1-204ENST00000517554 ASPRV1Q53RT3 343 aa24.7■■□□□ 1.54
MTCL1-204ENST00000517554 TRMT44Q8IYL2 757 aaKnown RBP24.7■■□□□ 1.54
MTCL1-204ENST00000517554 LRRC2Q9BYS8 371 aa24.7■■□□□ 1.54
MTCL1-204ENST00000517554 PAK6Q9NQU5 681 aaPredicted RBP24.7■■□□□ 1.54
MTCL1-204ENST00000517554 DNAJC25-GNG10A0A024R161 153 aa24.69■■□□□ 1.54
MTCL1-204ENST00000517554 ERICH2A1L162 156 aa24.69■■□□□ 1.54
MTCL1-204ENST00000517554 SH2B2O14492 632 aaPredicted RBP24.69■■□□□ 1.54
MTCL1-204ENST00000517554 ICAM1P05362 532 aa24.69■■□□□ 1.54
MTCL1-204ENST00000517554 PARP1P09874 1014 aaKnown RBP24.69■■□□□ 1.54
MTCL1-204ENST00000517554 PRKAR2AP13861 404 aaKnown RBP24.69■■□□□ 1.54
MTCL1-204ENST00000517554 SART3Q15020 963 aaKnown RBP24.69■■□□□ 1.54
MTCL1-204ENST00000517554 ZNF792Q3KQV3 632 aa24.69■■□□□ 1.54
MTCL1-204ENST00000517554 CHST13Q8NET6 341 aa24.69■■□□□ 1.54
MTCL1-204ENST00000517554 SHISA4Q96DD7 197 aa24.69■■□□□ 1.54
MTCL1-204ENST00000517554 NEK1Q96PY6 1258 aa24.69■■□□□ 1.54
MTCL1-204ENST00000517554 MTA3Q9BTC8 594 aa24.69■■□□□ 1.54
MTCL1-204ENST00000517554 KIAA0100Q14667 2235 aaKnown RBP24.69■■□□□ 1.54
MTCL1-204ENST00000517554 PALM3A6NDB9 673 aaPredicted RBP24.68■■□□□ 1.54
MTCL1-204ENST00000517554 REC8O95072 547 aa24.68■■□□□ 1.54
MTCL1-204ENST00000517554 GJB1P08034 283 aa24.68■■□□□ 1.54
MTCL1-204ENST00000517554 ALAS1P13196 640 aa24.68■■□□□ 1.54
MTCL1-204ENST00000517554 CYP2C19P33261 490 aa24.68■■□□□ 1.54
MTCL1-204ENST00000517554 EXOSC10Q01780 885 aaKnown RBP24.68■■□□□ 1.54
MTCL1-204ENST00000517554 MUM1L1Q5H9M0 696 aa24.68■■□□□ 1.54
MTCL1-204ENST00000517554 ADGRF4Q8IZF3 695 aa24.68■■□□□ 1.54
MTCL1-204ENST00000517554 MAML3Q96JK9 1138 aa24.68■■□□□ 1.54
MTCL1-204ENST00000517554 RNF146Q9NTX7 359 aa24.68■■□□□ 1.54
MTCL1-204ENST00000517554 SNX14Q9Y5W7 946 aa24.68■■□□□ 1.54
MTCL1-204ENST00000517554 ZNFX1Q9P2E3 1918 aaKnown RBP24.67■■□□□ 1.54
MTCL1-204ENST00000517554 TMEM87BQ96K49 555 aa24.67■■□□□ 1.54
MTCL1-204ENST00000517554 TCEANC2Q96MN5 208 aa24.67■■□□□ 1.54
MTCL1-204ENST00000517554 TRERF1Q96PN7 1200 aa24.67■■□□□ 1.54
MTCL1-204ENST00000517554 CCPG1Q9ULG6 757 aa24.67■■□□□ 1.54
MTCL1-204ENST00000517554 RPTORQ8N122 1335 aa24.67■■□□□ 1.54
MTCL1-204ENST00000517554 SMCHD1A6NHR9 2005 aa24.67■■□□□ 1.54
MTCL1-204ENST00000517554 GRM4Q14833 912 aa24.67■■□□□ 1.54
MTCL1-204ENST00000517554 OLFML2BQ68BL8 750 aa24.67■■□□□ 1.54
MTCL1-204ENST00000517554 MYL10Q9BUA6 226 aa24.67■■□□□ 1.54
MTCL1-204ENST00000517554 USP26Q9BXU7 913 aa24.67■■□□□ 1.54
MTCL1-204ENST00000517554 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.67■■□□□ 1.54
MTCL1-204ENST00000517554 JMJD4Q9H9V9 463 aa24.67■■□□□ 1.54
MTCL1-204ENST00000517554 FBXO40Q9UH90 709 aa24.67■■□□□ 1.54
MTCL1-204ENST00000517554 CPA1P15085 419 aa24.66■■□□□ 1.54
MTCL1-204ENST00000517554 CCND3P30281 292 aaPredicted RBP24.66■■□□□ 1.54
MTCL1-204ENST00000517554 TRPV1Q8NER1 839 aa24.66■■□□□ 1.54
MTCL1-204ENST00000517554 FGD4Q96M96 766 aa24.66■■□□□ 1.54
MTCL1-204ENST00000517554 ACAD9Q9H845 621 aa24.66■■□□□ 1.54
MTCL1-204ENST00000517554 A1CFQ9NQ94 594 aaKnown RBP24.66■■□□□ 1.54
MTCL1-204ENST00000517554 KLRF2D3W0D1 207 aa24.65■■□□□ 1.54
MTCL1-204ENST00000517554 LIFRP42702 1097 aa24.65■■□□□ 1.54
MTCL1-204ENST00000517554 GJA8P48165 433 aa24.65■■□□□ 1.54
MTCL1-204ENST00000517554 TKFCQ3LXA3 575 aa24.65■■□□□ 1.54
MTCL1-204ENST00000517554 ZNF654Q8IZM8 581 aa24.65■■□□□ 1.54
MTCL1-204ENST00000517554 ANKRD35Q8N283 1001 aa24.65■■□□□ 1.54
MTCL1-204ENST00000517554 U2AF1L4Q8WU68 220 aaKnown RBP24.65■■□□□ 1.54
MTCL1-204ENST00000517554 DEFB118Q96PH6 123 aa24.65■■□□□ 1.54
MTCL1-204ENST00000517554 HMX1Q9NP08 348 aaPredicted RBP24.65■■□□□ 1.54
MTCL1-204ENST00000517554 MKI67P46013 3256 aaKnown RBP24.65■■□□□ 1.54
MTCL1-204ENST00000517554 DHX32Q7L7V1 743 aaKnown RBP24.64■■□□□ 1.54
MTCL1-204ENST00000517554 DDX11Q96FC9 970 aa24.64■■□□□ 1.54
MTCL1-204ENST00000517554 VAT1LQ9HCJ6 419 aa24.64■■□□□ 1.54
MTCL1-204ENST00000517554 SLC5A4Q9NY91 659 aa24.64■■□□□ 1.54
MTCL1-204ENST00000517554 DIS3Q9Y2L1 958 aaKnown RBP24.64■■□□□ 1.54
MTCL1-204ENST00000517554 EPB41L2O43491 1005 aaKnown RBP24.63■■□□□ 1.53
MTCL1-204ENST00000517554 SGPL1O95470 568 aa24.63■■□□□ 1.53
MTCL1-204ENST00000517554 CNTN2Q02246 1040 aa24.63■■□□□ 1.53
MTCL1-204ENST00000517554 KRT32Q14532 448 aa24.63■■□□□ 1.53
MTCL1-204ENST00000517554 CDC37Q16543 378 aaPredicted RBP24.63■■□□□ 1.53
MTCL1-204ENST00000517554 MFSD14CQ5VZR4 134 aa24.63■■□□□ 1.53
MTCL1-204ENST00000517554 CATIPQ7Z7H3 387 aa24.63■■□□□ 1.53
MTCL1-204ENST00000517554 CLEC4DQ8WXI8 215 aa24.63■■□□□ 1.53
MTCL1-204ENST00000517554 WDR19Q8NEZ3 1342 aa24.63■■□□□ 1.53
MTCL1-204ENST00000517554 NFIBO00712 420 aa24.63■■□□□ 1.53
MTCL1-204ENST00000517554 CYTH3O43739 400 aa24.63■■□□□ 1.53
MTCL1-204ENST00000517554 CYBAP13498 195 aa24.63■■□□□ 1.53
MTCL1-204ENST00000517554 QRICH1Q2TAL8 776 aa24.63■■□□□ 1.53
MTCL1-204ENST00000517554 PRAMEF19Q5SWL8 479 aa24.63■■□□□ 1.53
MTCL1-204ENST00000517554 MTMR8Q96EF0 704 aa24.63■■□□□ 1.53
MTCL1-204ENST00000517554 SGMS1Q86VZ5 419 aa24.62■■□□□ 1.53
MTCL1-204ENST00000517554 FAM133AQ8N9E0 248 aa24.62■■□□□ 1.53
MTCL1-204ENST00000517554 NUP133Q8WUM0 1156 aa24.62■■□□□ 1.53
MTCL1-204ENST00000517554 TINF2Q9BSI4 451 aa24.62■■□□□ 1.53
MTCL1-204ENST00000517554 CRISPLD2Q9H0B8 497 aa24.62■■□□□ 1.53
MTCL1-204ENST00000517554 ASTN1O14525 1302 aa24.62■■□□□ 1.53
MTCL1-204ENST00000517554 PLXNA1Q9UIW2 1896 aa24.61■■□□□ 1.53
MTCL1-204ENST00000517554 RXRAP19793 462 aa24.61■■□□□ 1.53
MTCL1-204ENST00000517554 LHX8Q68G74 356 aa24.61■■□□□ 1.53
MTCL1-204ENST00000517554 RAB11FIP4Q86YS3 637 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms