RNA–Protein interactions for RNA: ENST00000514561.5

SEC24D-214, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 3,806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-214ENST00000514561 UBE4AQ14139 1066 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 SMC1AQ14683 1233 aaKnown RBP5.31□□□□□ -1.56
SEC24D-214ENST00000514561 WDR78Q5VTH9 848 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 LRRC31Q6UY01 552 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 SMYD4Q8IYR2 804 aaPredicted RBP5.31□□□□□ -1.56
SEC24D-214ENST00000514561 SLC44A5Q8NCS7 719 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 HNRNPLLQ8WVV9 542 aaKnown RBP5.31□□□□□ -1.56
SEC24D-214ENST00000514561 SAMM50Q9Y512 469 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 KDM4FA0A1W2PPD8 638 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 SH2B2O14492 632 aaPredicted RBP5.31□□□□□ -1.56
SEC24D-214ENST00000514561 VAMP1P23763 118 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 ARID4AP29374 1257 aaPredicted RBP5.31□□□□□ -1.56
SEC24D-214ENST00000514561 BTDP43251 543 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 CHMP4BP1P59074 171 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 KIF23Q02241 960 aaPredicted RBP5.31□□□□□ -1.56
SEC24D-214ENST00000514561 MECOMQ03112 1051 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 MYBPC2Q14324 1141 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 INF2Q27J81 1249 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 LONRF3Q496Y0 759 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 CCDC40Q4G0X9 1142 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 ARMCX5Q6P1M9 558 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 FCHSD1Q86WN1 690 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 OGFOD1Q8N543 542 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 EYA3Q99504 573 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 SENP2Q9HC62 589 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 C6orf50Q9HD87 102 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 MINPP1Q9UNW1 487 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 CTNND2Q9UQB3 1225 aa5.31□□□□□ -1.56
SEC24D-214ENST00000514561 BAZ2BQ9UIF8 2168 aaKnown RBP5.31□□□□□ -1.56
SEC24D-214ENST00000514561 JCADQ9P266 1359 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 MED23Q9ULK4 1368 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 USP17L3A6NCW0 530 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 USP17L4A6NCW7 530 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 EFCAB8A8MWE9 144 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 UBE2Q2LH0YL09 131 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 KIF5CO60282 957 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 SHOX2O60902 331 aaPredicted RBP5.3□□□□□ -1.56
SEC24D-214ENST00000514561 PLEKHA8P1O95397 391 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 TGFB3P10600 412 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 CDC27P30260 824 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 SETQ01105 290 aaPredicted RBP5.3□□□□□ -1.56
SEC24D-214ENST00000514561 GPS2Q13227 327 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 POSTNQ15063 836 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 USH1GQ495M9 461 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 HSP90B2PQ58FF3 399 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 FKBP15Q5T1M5 1219 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 ATL3Q6DD88 541 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 USP17L1Q7RTZ2 530 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 SEPT12Q8IYM1 358 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 LINC00301Q8NCQ3 95 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 CCDC150Q8NCX0 1101 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 RBM28Q9NW13 759 aaKnown RBP5.3□□□□□ -1.56
SEC24D-214ENST00000514561 ZMIZ1Q9ULJ6 1067 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 PRR12Q9ULL5 1215 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 PCDHA5Q9Y5H7 936 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 COL15A1P39059 1388 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 MYO1BO43795 1136 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 CUTAO60888 179 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 SERPINB2P05120 415 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 PLCG2P16885 1265 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 CASP1P29466 404 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 MATR3P43243 847 aaKnown RBP eCLIP5.3□□□□□ -1.562e-6■■■■□ 26.2
SEC24D-214ENST00000514561 CACNB3P54284 484 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 TMEM139Q8IV31 216 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 TBC1D22AQ8WUA7 517 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 KIFC2Q96AC6 838 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 DBNDD1Q9H9R9 158 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 BIN2Q9UBW5 565 aaPredicted RBP5.3□□□□□ -1.56
SEC24D-214ENST00000514561 RAB21Q9UL25 225 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 SH3BP1Q9Y3L3 701 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 ECM29Q5VYK3 1845 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 PSMA7O14818 248 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 BMP15O95972 392 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 ADKP55263 362 aaKnown RBP5.3□□□□□ -1.56
SEC24D-214ENST00000514561 SP4Q02446 784 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 PTGDRQ13258 359 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 CCDC181Q5TID7 509 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 DYMQ7RTS9 669 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 PPM1EQ8WY54 764 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 CUL5Q93034 780 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.3□□□□□ -1.56
SEC24D-214ENST00000514561 HSD3B7Q9H2F3 369 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 FANCLQ9NW38 375 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 TBC1D7Q9P0N9 293 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 PCDHB6Q9Y5E3 794 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 UBN2Q6ZU65 1347 aa5.3□□□□□ -1.56
SEC24D-214ENST00000514561 ATXN2Q99700 1313 aaKnown RBP5.3□□□□□ -1.56
SEC24D-214ENST00000514561 CPDO75976 1380 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 KLHL33A6NCF5 533 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 CHMP2AO43633 222 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 GNA11P29992 359 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 MAP3K9P80192 1104 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 UBXN1Q04323 297 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 SDR16C5Q8N3Y7 309 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 TACO1Q9BSH4 297 aaKnown RBP5.29□□□□□ -1.56
SEC24D-214ENST00000514561 GOLPH3LQ9H4A5 285 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 RNF19AQ9NV58 838 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 USP40Q9NVE5 1235 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 RTEL1Q9NZ71 1219 aa5.29□□□□□ -1.56
SEC24D-214ENST00000514561 RCOR1Q9UKL0 485 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms