RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 SNAP25P60880 206 aa22.57■■□□□ 1.2
LMNA-221ENST00000506981 CCL14Q16627 93 aa22.57■■□□□ 1.2
LMNA-221ENST00000506981 CATIPQ7Z7H3 387 aa22.57■■□□□ 1.2
LMNA-221ENST00000506981 DDX11Q96FC9 970 aa22.57■■□□□ 1.2
LMNA-221ENST00000506981 AGBL1Q96MI9 1066 aa22.57■■□□□ 1.2
LMNA-221ENST00000506981 NEK1Q96PY6 1258 aa22.57■■□□□ 1.2
LMNA-221ENST00000506981 UNC93B1Q9H1C4 597 aa22.57■■□□□ 1.2
LMNA-221ENST00000506981 ACAD9Q9H845 621 aa22.57■■□□□ 1.2
LMNA-221ENST00000506981 RNF146Q9NTX7 359 aa22.57■■□□□ 1.2
LMNA-221ENST00000506981 RIPK3Q9Y572 518 aa22.57■■□□□ 1.2
LMNA-221ENST00000506981 BAZ2BQ9UIF8 2168 aaKnown RBP22.56■■□□□ 1.2
LMNA-221ENST00000506981 POTEFA5A3E0 1075 aa22.56■■□□□ 1.2
LMNA-221ENST00000506981 ICAM1P05362 532 aa22.56■■□□□ 1.2
LMNA-221ENST00000506981 NFXL1Q6ZNB6 911 aa22.56■■□□□ 1.2
LMNA-221ENST00000506981 NPLOC4Q8TAT6 608 aa22.56■■□□□ 1.2
LMNA-221ENST00000506981 HMX1Q9NP08 348 aaPredicted RBP22.56■■□□□ 1.2
LMNA-221ENST00000506981 ZNF536O15090 1300 aa22.56■■□□□ 1.2
LMNA-221ENST00000506981 PRKAR2AP13861 404 aaKnown RBP22.55■■□□□ 1.2
LMNA-221ENST00000506981 TSGA10IPQ3SY00 556 aa22.55■■□□□ 1.2
LMNA-221ENST00000506981 ANKRD35Q8N283 1001 aa22.55■■□□□ 1.2
LMNA-221ENST00000506981 TMTC2Q8N394 836 aa22.55■■□□□ 1.2
LMNA-221ENST00000506981 IGDCC4Q8TDY8 1250 aa22.55■■□□□ 1.2
LMNA-221ENST00000506981 TRERF1Q96PN7 1200 aa22.55■■□□□ 1.2
LMNA-221ENST00000506981 UBA5Q9GZZ9 404 aa22.55■■□□□ 1.2
LMNA-221ENST00000506981 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.55■■□□□ 1.2
LMNA-221ENST00000506981 RPTORQ8N122 1335 aa22.55■■□□□ 1.2
LMNA-221ENST00000506981 CCDC69A6NI79 296 aa22.54■■□□□ 1.2
LMNA-221ENST00000506981 EPB41L2O43491 1005 aaKnown RBP22.54■■□□□ 1.2
LMNA-221ENST00000506981 COBLO75128 1261 aa22.54■■□□□ 1.2
LMNA-221ENST00000506981 PGK2P07205 417 aa22.54■■□□□ 1.2
LMNA-221ENST00000506981 GJB1P08034 283 aa22.54■■□□□ 1.2
LMNA-221ENST00000506981 HSPA4P34932 840 aa22.54■■□□□ 1.2
LMNA-221ENST00000506981 TRIM32Q13049 653 aa22.54■■□□□ 1.2
LMNA-221ENST00000506981 OLFML2BQ68BL8 750 aa22.54■■□□□ 1.2
LMNA-221ENST00000506981 LY9Q9HBG7 655 aa22.54■■□□□ 1.2
LMNA-221ENST00000506981 SH2B2O14492 632 aaPredicted RBP22.53■■□□□ 1.2
LMNA-221ENST00000506981 EIF5BO60841 1220 aaKnown RBP22.53■■□□□ 1.2
LMNA-221ENST00000506981 HMGB1P09429 215 aaKnown RBP22.53■■□□□ 1.2
LMNA-221ENST00000506981 GRM4Q14833 912 aa22.53■■□□□ 1.2
LMNA-221ENST00000506981 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.53■■□□□ 1.2
LMNA-221ENST00000506981 RASEFQ8IZ41 740 aa22.53■■□□□ 1.2
LMNA-221ENST00000506981 NUP133Q8WUM0 1156 aa22.53■■□□□ 1.2
LMNA-221ENST00000506981 SENP2Q9HC62 589 aa22.53■■□□□ 1.2
LMNA-221ENST00000506981 DIS3Q9Y2L1 958 aaKnown RBP22.53■■□□□ 1.2
LMNA-221ENST00000506981 CENPFP49454 3210 aa22.53■■□□□ 1.2
LMNA-221ENST00000506981 WDR19Q8NEZ3 1342 aa22.53■■□□□ 1.2
LMNA-221ENST00000506981 KLRF2D3W0D1 207 aa22.52■■□□□ 1.2
LMNA-221ENST00000506981 DDAH1O94760 285 aa22.52■■□□□ 1.2
LMNA-221ENST00000506981 RGS19P49795 217 aa22.52■■□□□ 1.2
LMNA-221ENST00000506981 CACNB2Q08289 660 aaPredicted RBP22.52■■□□□ 1.2
LMNA-221ENST00000506981 CDC37Q16543 378 aaPredicted RBP22.52■■□□□ 1.2
LMNA-221ENST00000506981 MAP3K21Q5TCX8 1036 aa22.52■■□□□ 1.2
LMNA-221ENST00000506981 ADGRF4Q8IZF3 695 aa22.52■■□□□ 1.2
LMNA-221ENST00000506981 ZNF654Q8IZM8 581 aa22.52■■□□□ 1.2
LMNA-221ENST00000506981 CTCFLQ8NI51 663 aaPredicted RBP22.52■■□□□ 1.2
LMNA-221ENST00000506981 MAML3Q96JK9 1138 aa22.52■■□□□ 1.2
LMNA-221ENST00000506981 CPVLQ9H3G5 476 aa22.52■■□□□ 1.2
LMNA-221ENST00000506981 FLRT1Q9NZU1 646 aa22.52■■□□□ 1.2
LMNA-221ENST00000506981 LCTP09848 1927 aa22.52■■□□□ 1.2
LMNA-221ENST00000506981 PFASO15067 1338 aa22.52■■□□□ 1.2
LMNA-221ENST00000506981 EN2P19622 333 aaPredicted RBP22.51■■□□□ 1.19
LMNA-221ENST00000506981 LIFRP42702 1097 aa22.51■■□□□ 1.19
LMNA-221ENST00000506981 GJA8P48165 433 aa22.51■■□□□ 1.19
LMNA-221ENST00000506981 ADCK5Q3MIX3 580 aa22.51■■□□□ 1.19
LMNA-221ENST00000506981 DHX32Q7L7V1 743 aaKnown RBP22.51■■□□□ 1.19
LMNA-221ENST00000506981 DEFB118Q96PH6 123 aa22.51■■□□□ 1.19
LMNA-221ENST00000506981 LRRC2Q9BYS8 371 aa22.51■■□□□ 1.19
LMNA-221ENST00000506981 PAK6Q9NQU5 681 aaPredicted RBP22.51■■□□□ 1.19
LMNA-221ENST00000506981 MAD2L2Q9UI95 211 aa22.51■■□□□ 1.19
LMNA-221ENST00000506981 CALM1P0DP23 149 aa22.5■■□□□ 1.19
LMNA-221ENST00000506981 CALM2P0DP24 149 aa22.5■■□□□ 1.19
LMNA-221ENST00000506981 CALM3P0DP25 149 aa22.5■■□□□ 1.19
LMNA-221ENST00000506981 KIF5BP33176 963 aa22.5■■□□□ 1.19
LMNA-221ENST00000506981 CYP2C19P33261 490 aa22.5■■□□□ 1.19
LMNA-221ENST00000506981 FGD1P98174 961 aa22.5■■□□□ 1.19
LMNA-221ENST00000506981 MLLT1Q03111 559 aaPredicted RBP22.5■■□□□ 1.19
LMNA-221ENST00000506981 TROAPQ12815 778 aa22.5■■□□□ 1.19
LMNA-221ENST00000506981 ZNF792Q3KQV3 632 aa22.5■■□□□ 1.19
LMNA-221ENST00000506981 SYNE3Q6ZMZ3 975 aa22.5■■□□□ 1.19
LMNA-221ENST00000506981 STAG2Q8N3U4 1231 aa22.5■■□□□ 1.19
LMNA-221ENST00000506981 U2AF1L4Q8WU68 220 aaKnown RBP22.5■■□□□ 1.19
LMNA-221ENST00000506981 KCNB2Q92953 911 aa22.5■■□□□ 1.19
LMNA-221ENST00000506981 JAKMIP1Q96N16 626 aaKnown RBP22.5■■□□□ 1.19
LMNA-221ENST00000506981 VAT1LQ9HCJ6 419 aa22.5■■□□□ 1.19
LMNA-221ENST00000506981 GPHNQ9NQX3 736 aaPredicted RBP22.5■■□□□ 1.19
LMNA-221ENST00000506981 SNX14Q9Y5W7 946 aa22.5■■□□□ 1.19
LMNA-221ENST00000506981 SLC12A7Q9Y666 1083 aa22.5■■□□□ 1.19
LMNA-221ENST00000506981 PALM3A6NDB9 673 aaPredicted RBP22.49■■□□□ 1.19
LMNA-221ENST00000506981 CAPN2P17655 700 aa22.49■■□□□ 1.19
LMNA-221ENST00000506981 PSMA5P28066 241 aa22.49■■□□□ 1.19
LMNA-221ENST00000506981 USH1GQ495M9 461 aa22.49■■□□□ 1.19
LMNA-221ENST00000506981 MUM1L1Q5H9M0 696 aa22.49■■□□□ 1.19
LMNA-221ENST00000506981 NSMFQ6X4W1 530 aa22.49■■□□□ 1.19
LMNA-221ENST00000506981 MAP3K14Q99558 947 aa22.49■■□□□ 1.19
LMNA-221ENST00000506981 A1CFQ9NQ94 594 aaKnown RBP22.49■■□□□ 1.19
LMNA-221ENST00000506981 DNAJC25-GNG10A0A024R161 153 aa22.48■■□□□ 1.19
LMNA-221ENST00000506981 POTEB2H3BUK9 544 aa22.48■■□□□ 1.19
LMNA-221ENST00000506981 SGPL1O95470 568 aa22.48■■□□□ 1.19
LMNA-221ENST00000506981 CNGA1P29973 690 aa22.48■■□□□ 1.19
LMNA-221ENST00000506981 BLOC1S2Q6QNY1 142 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 490 ms