RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 MAP2K5Q13163 448 aa19.55■□□□□ 0.72
PRKCB-210ENST00000498739 SLAIN1Q8ND83 568 aa19.55■□□□□ 0.72
PRKCB-210ENST00000498739 HOMER2Q9NSB8 354 aa19.55■□□□□ 0.72
PRKCB-210ENST00000498739 PLXNB2O15031 1838 aa19.55■□□□□ 0.72
PRKCB-210ENST00000498739 PALM3A6NDB9 673 aaPredicted RBP19.54■□□□□ 0.72
PRKCB-210ENST00000498739 ALAS1P13196 640 aa19.54■□□□□ 0.72
PRKCB-210ENST00000498739 RPS6KB1P23443 525 aa19.54■□□□□ 0.72
PRKCB-210ENST00000498739 ADORA2AP29274 412 aa19.54■□□□□ 0.72
PRKCB-210ENST00000498739 KCTD2Q14681 263 aa19.54■□□□□ 0.72
PRKCB-210ENST00000498739 NBPF11Q86T75 865 aa19.54■□□□□ 0.72
PRKCB-210ENST00000498739 ADGRF4Q8IZF3 695 aa19.54■□□□□ 0.72
PRKCB-210ENST00000498739 CTCFLQ8NI51 663 aaPredicted RBP19.54■□□□□ 0.72
PRKCB-210ENST00000498739 PXYLP1Q8TE99 480 aa19.54■□□□□ 0.72
PRKCB-210ENST00000498739 USP6NLQ92738 828 aa19.54■□□□□ 0.72
PRKCB-210ENST00000498739 MMP19Q99542 508 aa19.54■□□□□ 0.72
PRKCB-210ENST00000498739 APBA2Q99767 749 aa19.54■□□□□ 0.72
PRKCB-210ENST00000498739 VAT1LQ9HCJ6 419 aa19.54■□□□□ 0.72
PRKCB-210ENST00000498739 BIN2Q9UBW5 565 aaPredicted RBP19.54■□□□□ 0.72
PRKCB-210ENST00000498739 CCPG1Q9ULG6 757 aa19.54■□□□□ 0.72
PRKCB-210ENST00000498739 SLC12A7Q9Y666 1083 aa19.54■□□□□ 0.72
PRKCB-210ENST00000498739 CCDC85CA6NKD9 419 aa19.53■□□□□ 0.72
PRKCB-210ENST00000498739 ICAM1P05362 532 aa19.53■□□□□ 0.72
PRKCB-210ENST00000498739 RXRAP19793 462 aa19.53■□□□□ 0.72
PRKCB-210ENST00000498739 SYNE3Q6ZMZ3 975 aa19.53■□□□□ 0.72
PRKCB-210ENST00000498739 DPP9Q86TI2 863 aa19.53■□□□□ 0.72
PRKCB-210ENST00000498739 SGMS1Q86VZ5 419 aa19.53■□□□□ 0.72
PRKCB-210ENST00000498739 RAB11FIP4Q86YS3 637 aa19.53■□□□□ 0.72
PRKCB-210ENST00000498739 ABRAQ8N0Z2 381 aa19.53■□□□□ 0.72
PRKCB-210ENST00000498739 CHST13Q8NET6 341 aa19.53■□□□□ 0.72
PRKCB-210ENST00000498739 ARMC5Q96C12 935 aa19.53■□□□□ 0.72
PRKCB-210ENST00000498739 CALM1P0DP23 149 aa19.52■□□□□ 0.72
PRKCB-210ENST00000498739 CALM2P0DP24 149 aa19.52■□□□□ 0.72
PRKCB-210ENST00000498739 CALM3P0DP25 149 aa19.52■□□□□ 0.72
PRKCB-210ENST00000498739 TAL1P17542 331 aaPredicted RBP19.52■□□□□ 0.72
PRKCB-210ENST00000498739 KIF5BP33176 963 aa19.52■□□□□ 0.72
PRKCB-210ENST00000498739 CDC37Q16543 378 aaPredicted RBP19.52■□□□□ 0.72
PRKCB-210ENST00000498739 TKFCQ3LXA3 575 aa19.52■□□□□ 0.72
PRKCB-210ENST00000498739 Q6ZUG5 572 aa19.52■□□□□ 0.72
PRKCB-210ENST00000498739 CCDC144CPQ8IYA2 1237 aa19.52■□□□□ 0.72
PRKCB-210ENST00000498739 TRERF1Q96PN7 1200 aa19.52■□□□□ 0.72
PRKCB-210ENST00000498739 MAP3K14Q99558 947 aa19.52■□□□□ 0.72
PRKCB-210ENST00000498739 RNF146Q9NTX7 359 aa19.52■□□□□ 0.72
PRKCB-210ENST00000498739 FBXO40Q9UH90 709 aa19.52■□□□□ 0.72
PRKCB-210ENST00000498739 ZNF236Q9UL36 1845 aa19.51■□□□□ 0.71
PRKCB-210ENST00000498739 MYCP01106 439 aaPredicted RBP19.51■□□□□ 0.71
PRKCB-210ENST00000498739 XRCC5P13010 732 aaKnown RBP19.51■□□□□ 0.71
PRKCB-210ENST00000498739 CCL14Q16627 93 aa19.51■□□□□ 0.71
PRKCB-210ENST00000498739 RUFY3Q7L099 469 aa19.51■□□□□ 0.71
PRKCB-210ENST00000498739 MICU3Q86XE3 530 aa19.51■□□□□ 0.71
PRKCB-210ENST00000498739 NPLOC4Q8TAT6 608 aa19.51■□□□□ 0.71
PRKCB-210ENST00000498739 TRIB2Q92519 343 aa19.51■□□□□ 0.71
PRKCB-210ENST00000498739 ZNF333Q96JL9 665 aa19.51■□□□□ 0.71
PRKCB-210ENST00000498739 ACAD9Q9H845 621 aa19.51■□□□□ 0.71
PRKCB-210ENST00000498739 JMJD4Q9H9V9 463 aa19.51■□□□□ 0.71
PRKCB-210ENST00000498739 ZSWIM6Q9HCJ5 1215 aa19.51■□□□□ 0.71
PRKCB-210ENST00000498739 SLC5A4Q9NY91 659 aa19.51■□□□□ 0.71
PRKCB-210ENST00000498739 BRPF3Q9ULD4 1205 aa19.51■□□□□ 0.71
PRKCB-210ENST00000498739 CYP46A1Q9Y6A2 500 aa19.51■□□□□ 0.71
PRKCB-210ENST00000498739 KLF18A0A0U1RQI7 1052 aa19.5■□□□□ 0.71
PRKCB-210ENST00000498739 COBLO75128 1261 aa19.5■□□□□ 0.71
PRKCB-210ENST00000498739 HMGCRP04035 888 aa19.5■□□□□ 0.71
PRKCB-210ENST00000498739 INHAP05111 366 aa19.5■□□□□ 0.71
PRKCB-210ENST00000498739 PGK2P07205 417 aa19.5■□□□□ 0.71
PRKCB-210ENST00000498739 UBXN2AP68543 259 aa19.5■□□□□ 0.71
PRKCB-210ENST00000498739 APOA5Q6Q788 366 aa19.5■□□□□ 0.71
PRKCB-210ENST00000498739 TRMT44Q8IYL2 757 aaKnown RBP19.5■□□□□ 0.71
PRKCB-210ENST00000498739 ANKRD35Q8N283 1001 aa19.5■□□□□ 0.71
PRKCB-210ENST00000498739 BRF1Q92994 677 aa19.5■□□□□ 0.71
PRKCB-210ENST00000498739 DDX11Q96FC9 970 aa19.5■□□□□ 0.71
PRKCB-210ENST00000498739 UPF3BQ9BZI7 483 aaKnown RBP19.5■□□□□ 0.71
PRKCB-210ENST00000498739 TM6SF1Q9BZW5 370 aa19.5■□□□□ 0.71
PRKCB-210ENST00000498739 PNMA2Q9UL42 364 aa19.5■□□□□ 0.71
PRKCB-210ENST00000498739 NAP1L2Q9ULW6 460 aaPredicted RBP19.5■□□□□ 0.71
PRKCB-210ENST00000498739 CAPN15O75808 1086 aa19.49■□□□□ 0.71
PRKCB-210ENST00000498739 HOXC6P09630 235 aa19.49■□□□□ 0.71
PRKCB-210ENST00000498739 ANAPC15P60006 121 aa19.49■□□□□ 0.71
PRKCB-210ENST00000498739 QRICH1Q2TAL8 776 aa19.49■□□□□ 0.71
PRKCB-210ENST00000498739 USH1GQ495M9 461 aa19.49■□□□□ 0.71
PRKCB-210ENST00000498739 MUM1L1Q5H9M0 696 aa19.49■□□□□ 0.71
PRKCB-210ENST00000498739 HOMER1Q86YM7 354 aa19.49■□□□□ 0.71
PRKCB-210ENST00000498739 DOCK3Q8IZD9 2030 aa19.48■□□□□ 0.71
PRKCB-210ENST00000498739 ZBTB43O43298 467 aa19.48■□□□□ 0.71
PRKCB-210ENST00000498739 APOBRQ0VD83 1088 aa19.48■□□□□ 0.71
PRKCB-210ENST00000498739 TRIM32Q13049 653 aa19.48■□□□□ 0.71
PRKCB-210ENST00000498739 SLC35G1Q2M3R5 365 aa19.48■□□□□ 0.71
PRKCB-210ENST00000498739 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.48■□□□□ 0.71
PRKCB-210ENST00000498739 FANCBQ8NB91 859 aa19.48■□□□□ 0.71
PRKCB-210ENST00000498739 RIOX1Q9H6W3 641 aa19.48■□□□□ 0.71
PRKCB-210ENST00000498739 FLRT1Q9NZU1 646 aa19.48■□□□□ 0.71
PRKCB-210ENST00000498739 ZBTB5O15062 677 aa19.47■□□□□ 0.71
PRKCB-210ENST00000498739 CYTH3O43739 400 aa19.47■□□□□ 0.71
PRKCB-210ENST00000498739 PLEKHA8P1O95397 391 aa19.47■□□□□ 0.71
PRKCB-210ENST00000498739 GNAQP50148 359 aa19.47■□□□□ 0.71
PRKCB-210ENST00000498739 MTFR1Q15390 333 aa19.47■□□□□ 0.71
PRKCB-210ENST00000498739 NSMFQ6X4W1 530 aa19.47■□□□□ 0.71
PRKCB-210ENST00000498739 FBXO11Q86XK2 927 aa19.47■□□□□ 0.71
PRKCB-210ENST00000498739 PIBF1Q8WXW3 757 aa19.47■□□□□ 0.71
PRKCB-210ENST00000498739 MAML3Q96JK9 1138 aa19.47■□□□□ 0.71
PRKCB-210ENST00000498739 PIGSQ96S52 555 aa19.47■□□□□ 0.71
PRKCB-210ENST00000498739 LZTS2Q9BRK4 669 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms