RNA–Protein interactions for RNA: ENST00000497391.5

HCLS1-212, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 4

Gene HCLS1, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-212ENST00000497391 TMTC2Q8N394 836 aa19.28■□□□□ 0.68
HCLS1-212ENST00000497391 U2AF1L4Q8WU68 220 aaKnown RBP19.28■□□□□ 0.68
HCLS1-212ENST00000497391 RANBP17Q9H2T7 1088 aaKnown RBP19.28■□□□□ 0.68
HCLS1-212ENST00000497391 RNF146Q9NTX7 359 aa19.28■□□□□ 0.68
HCLS1-212ENST00000497391 PFASO15067 1338 aa19.27■□□□□ 0.68
HCLS1-212ENST00000497391 DOCK3Q8IZD9 2030 aa19.27■□□□□ 0.68
HCLS1-212ENST00000497391 PRC1O43663 620 aa19.27■□□□□ 0.68
HCLS1-212ENST00000497391 EN2P19622 333 aaPredicted RBP19.27■□□□□ 0.68
HCLS1-212ENST00000497391 NECTIN1Q15223 517 aa19.27■□□□□ 0.68
HCLS1-212ENST00000497391 TTBK2Q6IQ55 1244 aa19.27■□□□□ 0.68
HCLS1-212ENST00000497391 RASGRP2Q7LDG7 609 aa19.27■□□□□ 0.68
HCLS1-212ENST00000497391 TMEM87BQ96K49 555 aa19.27■□□□□ 0.68
HCLS1-212ENST00000497391 DEFB118Q96PH6 123 aa19.27■□□□□ 0.68
HCLS1-212ENST00000497391 TRERF1Q96PN7 1200 aa19.27■□□□□ 0.68
HCLS1-212ENST00000497391 DIS3Q9Y2L1 958 aaKnown RBP19.27■□□□□ 0.68
HCLS1-212ENST00000497391 CCDC69A6NI79 296 aa19.26■□□□□ 0.67
HCLS1-212ENST00000497391 MSCO60682 206 aa19.26■□□□□ 0.67
HCLS1-212ENST00000497391 GOLGA8HP0CJ92 632 aa19.26■□□□□ 0.67
HCLS1-212ENST00000497391 CNGA1P29973 690 aa19.26■□□□□ 0.67
HCLS1-212ENST00000497391 SEC23AQ15436 765 aa19.26■□□□□ 0.67
HCLS1-212ENST00000497391 STOX1Q6ZVD7 989 aa19.26■□□□□ 0.67
HCLS1-212ENST00000497391 MB21D2Q8IYB1 491 aaPredicted RBP19.26■□□□□ 0.67
HCLS1-212ENST00000497391 NPLOC4Q8TAT6 608 aa19.26■□□□□ 0.67
HCLS1-212ENST00000497391 MAML3Q96JK9 1138 aa19.26■□□□□ 0.67
HCLS1-212ENST00000497391 AGBL1Q96MI9 1066 aa19.26■□□□□ 0.67
HCLS1-212ENST00000497391 PAK6Q9NQU5 681 aaPredicted RBP19.26■□□□□ 0.67
HCLS1-212ENST00000497391 SGPL1O95470 568 aa19.25■□□□□ 0.67
HCLS1-212ENST00000497391 PGK2P07205 417 aa19.25■□□□□ 0.67
HCLS1-212ENST00000497391 HMGB1P09429 215 aaKnown RBP19.25■□□□□ 0.67
HCLS1-212ENST00000497391 KIF5BP33176 963 aa19.25■□□□□ 0.67
HCLS1-212ENST00000497391 CACNB2Q08289 660 aaPredicted RBP19.25■□□□□ 0.67
HCLS1-212ENST00000497391 TRAF1Q13077 416 aa19.25■□□□□ 0.67
HCLS1-212ENST00000497391 MAP3K21Q5TCX8 1036 aa19.25■□□□□ 0.67
HCLS1-212ENST00000497391 SYNE3Q6ZMZ3 975 aa19.25■□□□□ 0.67
HCLS1-212ENST00000497391 CHST3Q7LGC8 479 aa19.25■□□□□ 0.67
HCLS1-212ENST00000497391 MSL3Q8N5Y2 521 aaKnown RBP19.25■□□□□ 0.67
HCLS1-212ENST00000497391 CTCFLQ8NI51 663 aaPredicted RBP19.25■□□□□ 0.67
HCLS1-212ENST00000497391 CNPY2Q9Y2B0 182 aa19.25■□□□□ 0.67
HCLS1-212ENST00000497391 RIPK3Q9Y572 518 aa19.25■□□□□ 0.67
HCLS1-212ENST00000497391 CENPFP49454 3210 aa19.25■□□□□ 0.67
HCLS1-212ENST00000497391 WDR19Q8NEZ3 1342 aa19.25■□□□□ 0.67
HCLS1-212ENST00000497391 POTEB2H3BUK9 544 aa19.24■□□□□ 0.67
HCLS1-212ENST00000497391 COBLO75128 1261 aa19.24■□□□□ 0.67
HCLS1-212ENST00000497391 CYP2C19P33261 490 aa19.24■□□□□ 0.67
HCLS1-212ENST00000497391 SNAP25P60880 206 aa19.24■□□□□ 0.67
HCLS1-212ENST00000497391 FGD1P98174 961 aa19.24■□□□□ 0.67
HCLS1-212ENST00000497391 TRIM32Q13049 653 aa19.24■□□□□ 0.67
HCLS1-212ENST00000497391 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.24■□□□□ 0.67
HCLS1-212ENST00000497391 NRBP1Q9UHY1 535 aa19.24■□□□□ 0.67
HCLS1-212ENST00000497391 TAF6LQ9Y6J9 622 aa19.24■□□□□ 0.67
HCLS1-212ENST00000497391 KLRF2D3W0D1 207 aa19.23■□□□□ 0.67
HCLS1-212ENST00000497391 EPB41L2O43491 1005 aaKnown RBP19.23■□□□□ 0.67
HCLS1-212ENST00000497391 CALM1P0DP23 149 aa19.23■□□□□ 0.67
HCLS1-212ENST00000497391 CALM2P0DP24 149 aa19.23■□□□□ 0.67
HCLS1-212ENST00000497391 CALM3P0DP25 149 aa19.23■□□□□ 0.67
HCLS1-212ENST00000497391 CDC37Q16543 378 aaPredicted RBP19.23■□□□□ 0.67
HCLS1-212ENST00000497391 NEK1Q96PY6 1258 aa19.23■□□□□ 0.67
HCLS1-212ENST00000497391 MPHOSPH6Q99547 160 aaKnown RBP19.23■□□□□ 0.67
HCLS1-212ENST00000497391 UBA5Q9GZZ9 404 aa19.23■□□□□ 0.67
HCLS1-212ENST00000497391 FLRT1Q9NZU1 646 aa19.23■□□□□ 0.67
HCLS1-212ENST00000497391 ZNF536O15090 1300 aa19.23■□□□□ 0.67
HCLS1-212ENST00000497391 KIAA0100Q14667 2235 aaKnown RBP19.23■□□□□ 0.67
HCLS1-212ENST00000497391 DDAH1O94760 285 aa19.22■□□□□ 0.67
HCLS1-212ENST00000497391 FARP2O94887 1054 aaPredicted RBP19.22■□□□□ 0.67
HCLS1-212ENST00000497391 ZNF792Q3KQV3 632 aa19.22■□□□□ 0.67
HCLS1-212ENST00000497391 NSMFQ6X4W1 530 aa19.22■□□□□ 0.67
HCLS1-212ENST00000497391 ZNF467Q7Z7K2 595 aaPredicted RBP19.22■□□□□ 0.67
HCLS1-212ENST00000497391 ADGRF4Q8IZF3 695 aa19.22■□□□□ 0.67
HCLS1-212ENST00000497391 ANKLE1Q8NAG6 615 aa19.22■□□□□ 0.67
HCLS1-212ENST00000497391 NUP133Q8WUM0 1156 aa19.22■□□□□ 0.67
HCLS1-212ENST00000497391 TINF2Q9BSI4 451 aa19.22■□□□□ 0.67
HCLS1-212ENST00000497391 GNAQP50148 359 aa19.21■□□□□ 0.67
HCLS1-212ENST00000497391 ANTXR2P58335 489 aa19.21■□□□□ 0.67
HCLS1-212ENST00000497391 GRM4Q14833 912 aa19.21■□□□□ 0.67
HCLS1-212ENST00000497391 IGDCC4Q8TDY8 1250 aa19.21■□□□□ 0.67
HCLS1-212ENST00000497391 MAP3K14Q99558 947 aa19.21■□□□□ 0.67
HCLS1-212ENST00000497391 HTATIP2Q9BUP3 242 aa19.21■□□□□ 0.67
HCLS1-212ENST00000497391 LY9Q9HBG7 655 aa19.21■□□□□ 0.67
HCLS1-212ENST00000497391 A1CFQ9NQ94 594 aaKnown RBP19.21■□□□□ 0.67
HCLS1-212ENST00000497391 ADD3Q9UEY8 706 aaKnown RBP19.21■□□□□ 0.67
HCLS1-212ENST00000497391 SLC12A7Q9Y666 1083 aa19.21■□□□□ 0.67
HCLS1-212ENST00000497391 ABCB11O95342 1321 aa19.21■□□□□ 0.67
HCLS1-212ENST00000497391 SYNGAP1Q96PV0 1343 aa19.21■□□□□ 0.67
HCLS1-212ENST00000497391 PTPDC1A2A3K4 754 aa19.2■□□□□ 0.66
HCLS1-212ENST00000497391 ASB14A6NK59 587 aa19.2■□□□□ 0.66
HCLS1-212ENST00000497391 B4DLN1 442 aa19.2■□□□□ 0.66
HCLS1-212ENST00000497391 SH2B2O14492 632 aaPredicted RBP19.2■□□□□ 0.66
HCLS1-212ENST00000497391 PSMA5P28066 241 aa19.2■□□□□ 0.66
HCLS1-212ENST00000497391 CCND3P30281 292 aaPredicted RBP19.2■□□□□ 0.66
HCLS1-212ENST00000497391 LIFRP42702 1097 aa19.2■□□□□ 0.66
HCLS1-212ENST00000497391 MRPL12P52815 198 aaKnown RBP19.2■□□□□ 0.66
HCLS1-212ENST00000497391 TSGA10IPQ3SY00 556 aa19.2■□□□□ 0.66
HCLS1-212ENST00000497391 USH1GQ495M9 461 aa19.2■□□□□ 0.66
HCLS1-212ENST00000497391 FBXO11Q86XK2 927 aa19.2■□□□□ 0.66
HCLS1-212ENST00000497391 ZNF654Q8IZM8 581 aa19.2■□□□□ 0.66
HCLS1-212ENST00000497391 LZTS2Q9BRK4 669 aa19.2■□□□□ 0.66
HCLS1-212ENST00000497391 VAT1LQ9HCJ6 419 aa19.2■□□□□ 0.66
HCLS1-212ENST00000497391 DDX20Q9UHI6 824 aaKnown RBP19.2■□□□□ 0.66
HCLS1-212ENST00000497391 DNAJC25-GNG10A0A024R161 153 aa19.19■□□□□ 0.66
HCLS1-212ENST00000497391 SEPT4O43236 478 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms