RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 CPVLQ9H3G5 476 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 ANO2Q9NQ90 1003 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 GPHNQ9NQX3 736 aaPredicted RBP8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 PARP14Q460N5 1801 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 RPTORQ8N122 1335 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 DOCK3Q8IZD9 2030 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 LAMA4Q16363 1823 aa8.43□□□□□ -1.06
PDLIM1-204ENST00000492511 COPB2P35606 906 aa8.43□□□□□ -1.06
PDLIM1-204ENST00000492511 SLC4A3P48751 1232 aa8.43□□□□□ -1.06
PDLIM1-204ENST00000492511 MNX1P50219 401 aaPredicted RBP8.43□□□□□ -1.06
PDLIM1-204ENST00000492511 TRDNQ13061 729 aa8.43□□□□□ -1.06
PDLIM1-204ENST00000492511 IKQ13123 557 aaPredicted RBP8.43□□□□□ -1.06
PDLIM1-204ENST00000492511 SLC35G1Q2M3R5 365 aa8.43□□□□□ -1.06
PDLIM1-204ENST00000492511 MUM1L1Q5H9M0 696 aa8.43□□□□□ -1.06
PDLIM1-204ENST00000492511 PRAMEF19Q5SWL8 479 aa8.43□□□□□ -1.06
PDLIM1-204ENST00000492511 IFIT1BQ5T764 474 aaKnown RBP8.43□□□□□ -1.06
PDLIM1-204ENST00000492511 LHX8Q68G74 356 aa8.43□□□□□ -1.06
PDLIM1-204ENST00000492511 CCDC174Q6PII3 467 aa8.43□□□□□ -1.06
PDLIM1-204ENST00000492511 RASEFQ8IZ41 740 aa8.43□□□□□ -1.06
PDLIM1-204ENST00000492511 STAG2Q8N3U4 1231 aa8.43□□□□□ -1.06
PDLIM1-204ENST00000492511 NCOA7Q8NI08 942 aa8.43□□□□□ -1.06
PDLIM1-204ENST00000492511 UBAC1Q9BSL1 405 aa8.43□□□□□ -1.06
PDLIM1-204ENST00000492511 KAT14Q9H8E8 782 aa8.43□□□□□ -1.06
PDLIM1-204ENST00000492511 HMX1Q9NP08 348 aaPredicted RBP8.43□□□□□ -1.06
PDLIM1-204ENST00000492511 ISY1Q9ULR0 285 aaKnown RBP8.43□□□□□ -1.06
PDLIM1-204ENST00000492511 MYH4Q9Y623 1939 aa8.42□□□□□ -1.06
PDLIM1-204ENST00000492511 IFIT3O14879 490 aaKnown RBP8.42□□□□□ -1.06
PDLIM1-204ENST00000492511 ICAM1P05362 532 aa8.42□□□□□ -1.06
PDLIM1-204ENST00000492511 CYBAP13498 195 aa8.42□□□□□ -1.06
PDLIM1-204ENST00000492511 KCTD2Q14681 263 aa8.42□□□□□ -1.06
PDLIM1-204ENST00000492511 TSGA10IPQ3SY00 556 aa8.42□□□□□ -1.06
PDLIM1-204ENST00000492511 GPATCH4Q5T3I0 446 aaKnown RBP8.42□□□□□ -1.06
PDLIM1-204ENST00000492511 MFSD14CQ5VZR4 134 aa8.42□□□□□ -1.06
PDLIM1-204ENST00000492511 CHST13Q8NET6 341 aa8.42□□□□□ -1.06
PDLIM1-204ENST00000492511 CLEC4DQ8WXI8 215 aa8.42□□□□□ -1.06
PDLIM1-204ENST00000492511 KCNB2Q92953 911 aa8.42□□□□□ -1.06
PDLIM1-204ENST00000492511 TRERF1Q96PN7 1200 aa8.42□□□□□ -1.06
PDLIM1-204ENST00000492511 JMJD4Q9H9V9 463 aa8.42□□□□□ -1.06
PDLIM1-204ENST00000492511 LY9Q9HBG7 655 aa8.42□□□□□ -1.06
PDLIM1-204ENST00000492511 HOMER2Q9NSB8 354 aa8.42□□□□□ -1.06
PDLIM1-204ENST00000492511 MAD2L2Q9UI95 211 aa8.42□□□□□ -1.06
PDLIM1-204ENST00000492511 OGDHLQ9ULD0 1010 aa8.42□□□□□ -1.06
PDLIM1-204ENST00000492511 DIS3Q9Y2L1 958 aaKnown RBP8.42□□□□□ -1.06
PDLIM1-204ENST00000492511 CTDP1Q9Y5B0 961 aaPredicted RBP8.42□□□□□ -1.06
PDLIM1-204ENST00000492511 DNAH12Q6ZR08 3092 aa8.42□□□□□ -1.06
PDLIM1-204ENST00000492511 CEP290O15078 2479 aa8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 COL11A1P12107 1806 aaPredicted RBP8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 ASTN1O14525 1302 aa8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 PALM3A6NDB9 673 aaPredicted RBP8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 SOWAHBA6NEL2 793 aa8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 PRC1O43663 620 aa8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 SNAI1O95863 264 aaPredicted RBP8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 TFRCP02786 760 aaKnown RBP8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 PARP1P09874 1014 aaKnown RBP8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 ZNF865P0CJ78 1059 aaPredicted RBP8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 ALAS1P13196 640 aa8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 EXOSC10Q01780 885 aaKnown RBP8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 CNTN2Q02246 1040 aa8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 TROAPQ12815 778 aa8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 TKFCQ3LXA3 575 aa8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 ADCK5Q3MIX3 580 aa8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 ASPRV1Q53RT3 343 aa8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 TMEM67Q5HYA8 995 aa8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 CASC1Q6TDU7 716 aa8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 MAMDC4Q6UXC1 1216 aa8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 RALYLQ86SE5 291 aaKnown RBP8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 ADGRF4Q8IZF3 695 aa8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 FAM133AQ8N9E0 248 aa8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 PURBQ96QR8 312 aaKnown RBP8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 TINF2Q9BSI4 451 aa8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 ACAD9Q9H845 621 aa8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 A1CFQ9NQ94 594 aaKnown RBP8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 RNF146Q9NTX7 359 aa8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 FBXO40Q9UH90 709 aa8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 CCPG1Q9ULG6 757 aa8.41□□□□□ -1.06
PDLIM1-204ENST00000492511 ZNF236Q9UL36 1845 aa8.4□□□□□ -1.06
PDLIM1-204ENST00000492511 NFIBO00712 420 aa8.4□□□□□ -1.06
PDLIM1-204ENST00000492511 SH2B2O14492 632 aaPredicted RBP8.4□□□□□ -1.06
PDLIM1-204ENST00000492511 CYTH3O43739 400 aa8.4□□□□□ -1.06
PDLIM1-204ENST00000492511 MCM5P33992 734 aa8.4□□□□□ -1.06
PDLIM1-204ENST00000492511 GRM4Q14833 912 aa8.4□□□□□ -1.06
PDLIM1-204ENST00000492511 WTAPQ15007 396 aa8.4□□□□□ -1.06
PDLIM1-204ENST00000492511 ZNF467Q7Z7K2 595 aaPredicted RBP8.4□□□□□ -1.06
PDLIM1-204ENST00000492511 ANKRD35Q8N283 1001 aa8.4□□□□□ -1.06
PDLIM1-204ENST00000492511 DIS3LQ8TF46 1054 aaKnown RBP8.4□□□□□ -1.06
PDLIM1-204ENST00000492511 TBC1D5Q92609 795 aa8.4□□□□□ -1.06
PDLIM1-204ENST00000492511 MTMR8Q96EF0 704 aa8.4□□□□□ -1.06
PDLIM1-204ENST00000492511 DDX11Q96FC9 970 aa8.4□□□□□ -1.06
PDLIM1-204ENST00000492511 NEK1Q96PY6 1258 aa8.4□□□□□ -1.06
PDLIM1-204ENST00000492511 LRRC2Q9BYS8 371 aa8.4□□□□□ -1.06
PDLIM1-204ENST00000492511 KATNBL1Q9H079 304 aa8.4□□□□□ -1.06
PDLIM1-204ENST00000492511 VAT1LQ9HCJ6 419 aa8.4□□□□□ -1.06
PDLIM1-204ENST00000492511 SLC5A4Q9NY91 659 aa8.4□□□□□ -1.06
PDLIM1-204ENST00000492511 CYP39A1Q9NYL5 469 aa8.4□□□□□ -1.06
PDLIM1-204ENST00000492511 DDX49Q9Y6V7 483 aaKnown RBP8.4□□□□□ -1.06
PDLIM1-204ENST00000492511 WDR19Q8NEZ3 1342 aa8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 ERICH2A1L162 156 aa8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 KLRF2D3W0D1 207 aa8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 SEPT4O43236 478 aa8.39□□□□□ -1.07
PDLIM1-204ENST00000492511 PPP1R11O60927 126 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms