RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 SURF6O75683 361 aaKnown RBP16.73■□□□□ 0.27
ATG4B-222ENST00000491867 SLC4A3P48751 1232 aa16.73■□□□□ 0.27
ATG4B-222ENST00000491867 TTLL4Q14679 1199 aa16.73■□□□□ 0.27
ATG4B-222ENST00000491867 ARNTL2Q8WYA1 636 aa16.73■□□□□ 0.27
ATG4B-222ENST00000491867 ARHGAP45Q92619 1136 aa16.73■□□□□ 0.27
ATG4B-222ENST00000491867 SCLYQ96I15 445 aa16.73■□□□□ 0.27
ATG4B-222ENST00000491867 GOPCQ9HD26 462 aa16.73■□□□□ 0.27
ATG4B-222ENST00000491867 DCP1AQ9NPI6 582 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-222ENST00000491867 ZDBF2Q9HCK1 2354 aa16.73■□□□□ 0.27
ATG4B-222ENST00000491867 GRIN2DO15399 1336 aa16.72■□□□□ 0.27
ATG4B-222ENST00000491867 RARSP54136 660 aaKnown RBP16.72■□□□□ 0.27
ATG4B-222ENST00000491867 NKX3-2P78367 333 aa16.72■□□□□ 0.27
ATG4B-222ENST00000491867 ITGA7Q13683 1181 aa16.72■□□□□ 0.27
ATG4B-222ENST00000491867 NOL8Q76FK4 1167 aaKnown RBP16.72■□□□□ 0.27
ATG4B-222ENST00000491867 EAF2Q96CJ1 260 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-222ENST00000491867 SNX27Q96L92 541 aa16.72■□□□□ 0.27
ATG4B-222ENST00000491867 CCDC17Q96LX7 622 aa16.72■□□□□ 0.27
ATG4B-222ENST00000491867 FGD4Q96M96 766 aa16.72■□□□□ 0.27
ATG4B-222ENST00000491867 B4GALT4O60513 344 aa16.71■□□□□ 0.27
ATG4B-222ENST00000491867 CABYRO75952 493 aa16.71■□□□□ 0.27
ATG4B-222ENST00000491867 PDE6AP16499 860 aa16.71■□□□□ 0.27
ATG4B-222ENST00000491867 SLC9C2Q5TAH2 1124 aa16.71■□□□□ 0.27
ATG4B-222ENST00000491867 ARMCX2Q7L311 632 aa16.71■□□□□ 0.27
ATG4B-222ENST00000491867 AGBL1Q96MI9 1066 aa16.71■□□□□ 0.27
ATG4B-222ENST00000491867 NUP88Q99567 741 aaPredicted RBP16.71■□□□□ 0.27
ATG4B-222ENST00000491867 ASTN1O14525 1302 aa16.7■□□□□ 0.26
ATG4B-222ENST00000491867 BCAR3O75815 825 aa16.7■□□□□ 0.26
ATG4B-222ENST00000491867 ARHGEF15O94989 841 aa16.7■□□□□ 0.26
ATG4B-222ENST00000491867 CDK8P49336 464 aa16.7■□□□□ 0.26
ATG4B-222ENST00000491867 TAP1Q03518 808 aa16.7■□□□□ 0.26
ATG4B-222ENST00000491867 CPXCR1Q8N123 301 aa16.7■□□□□ 0.26
ATG4B-222ENST00000491867 LCORLQ8N3X6 602 aa16.7■□□□□ 0.26
ATG4B-222ENST00000491867 SSH3Q8TE77 659 aa16.7■□□□□ 0.26
ATG4B-222ENST00000491867 UIMC1Q96RL1 719 aa16.7■□□□□ 0.26
ATG4B-222ENST00000491867 SLF1Q9BQI6 1058 aa16.7■□□□□ 0.26
ATG4B-222ENST00000491867 KATNBL1Q9H079 304 aa16.7■□□□□ 0.26
ATG4B-222ENST00000491867 KANSL2Q9H9L4 492 aa16.7■□□□□ 0.26
ATG4B-222ENST00000491867 TNNQ9UQP3 1299 aa16.7■□□□□ 0.26
ATG4B-222ENST00000491867 CACNA1AO00555 2505 aa16.7■□□□□ 0.26
ATG4B-222ENST00000491867 MYH8P13535 1937 aa16.7■□□□□ 0.26
ATG4B-222ENST00000491867 CYP2D7A0A087X1C5 515 aa16.69■□□□□ 0.26
ATG4B-222ENST00000491867 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-222ENST00000491867 PRR33A8MZF0 331 aa16.69■□□□□ 0.26
ATG4B-222ENST00000491867 PSMC6P62333 389 aa16.69■□□□□ 0.26
ATG4B-222ENST00000491867 TNFAIP2Q03169 654 aa16.69■□□□□ 0.26
ATG4B-222ENST00000491867 GRB10Q13322 594 aa16.69■□□□□ 0.26
ATG4B-222ENST00000491867 FSCN1Q16658 493 aaKnown RBP16.69■□□□□ 0.26
ATG4B-222ENST00000491867 DEFB128Q7Z7B8 93 aa16.69■□□□□ 0.26
ATG4B-222ENST00000491867 CCDC144CPQ8IYA2 1237 aa16.69■□□□□ 0.26
ATG4B-222ENST00000491867 ANKRD35Q8N283 1001 aa16.69■□□□□ 0.26
ATG4B-222ENST00000491867 PFKMP08237 780 aa16.68■□□□□ 0.26
ATG4B-222ENST00000491867 PTGS1P23219 599 aa16.68■□□□□ 0.26
ATG4B-222ENST00000491867 ATP8B2P98198 1209 aa16.68■□□□□ 0.26
ATG4B-222ENST00000491867 TLK2Q86UE8 772 aa16.68■□□□□ 0.26
ATG4B-222ENST00000491867 SEZ6LQ9BYH1 1024 aa16.68■□□□□ 0.26
ATG4B-222ENST00000491867 AP5M1Q9H0R1 490 aa16.68■□□□□ 0.26
ATG4B-222ENST00000491867 SPTBN4Q9H254 2564 aa16.68■□□□□ 0.26
ATG4B-222ENST00000491867 ZNF532Q9HCE3 1301 aa16.68■□□□□ 0.26
ATG4B-222ENST00000491867 CFAP54Q96N23 3096 aa16.67■□□□□ 0.26
ATG4B-222ENST00000491867 CCER2I3L3R5 266 aa16.67■□□□□ 0.26
ATG4B-222ENST00000491867 PRKAB2O43741 272 aa16.67■□□□□ 0.26
ATG4B-222ENST00000491867 TRIM27P14373 513 aa16.67■□□□□ 0.26
ATG4B-222ENST00000491867 NHLH1Q02575 133 aa16.67■□□□□ 0.26
ATG4B-222ENST00000491867 SPRED2Q7Z698 418 aa16.67■□□□□ 0.26
ATG4B-222ENST00000491867 ARMT1Q9H993 441 aa16.67■□□□□ 0.26
ATG4B-222ENST00000491867 RAVER2Q9HCJ3 691 aaKnown RBP16.67■□□□□ 0.26
ATG4B-222ENST00000491867 GNEQ9Y223 722 aaKnown RBP16.67■□□□□ 0.26
ATG4B-222ENST00000491867 NOP58Q9Y2X3 529 aaKnown RBP16.67■□□□□ 0.26
ATG4B-222ENST00000491867 CTDP1Q9Y5B0 961 aaPredicted RBP16.67■□□□□ 0.26
ATG4B-222ENST00000491867 TCRBV5S4A2TA0A5A2 114 aa16.66■□□□□ 0.26
ATG4B-222ENST00000491867 ATP2A1O14983 1001 aa16.66■□□□□ 0.26
ATG4B-222ENST00000491867 DYNC1LI2O43237 492 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-222ENST00000491867 ZEB2O60315 1214 aa16.66■□□□□ 0.26
ATG4B-222ENST00000491867 LPXNO60711 386 aa16.66■□□□□ 0.26
ATG4B-222ENST00000491867 ZBED4O75132 1171 aa16.66■□□□□ 0.26
ATG4B-222ENST00000491867 CYP2C9P11712 490 aa16.66■□□□□ 0.26
ATG4B-222ENST00000491867 CNTN2Q02246 1040 aa16.66■□□□□ 0.26
ATG4B-222ENST00000491867 TTF1Q15361 905 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-222ENST00000491867 C12orf60Q5U649 245 aa16.66■□□□□ 0.26
ATG4B-222ENST00000491867 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.66■□□□□ 0.26
ATG4B-222ENST00000491867 GJD3Q8N144 294 aa16.66■□□□□ 0.26
ATG4B-222ENST00000491867 PRPF38AQ8NAV1 312 aaKnown RBP16.66■□□□□ 0.26
ATG4B-222ENST00000491867 CLUAP1Q96AJ1 413 aa16.66■□□□□ 0.26
ATG4B-222ENST00000491867 SLC9A7Q96T83 725 aa16.66■□□□□ 0.26
ATG4B-222ENST00000491867 ALDH8A1Q9H2A2 487 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-222ENST00000491867 ZFHX2Q9C0A1 2572 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-222ENST00000491867 ZNF318Q5VUA4 2279 aa16.66■□□□□ 0.26
ATG4B-222ENST00000491867 IPO8O15397 1037 aaKnown RBP16.65■□□□□ 0.26
ATG4B-222ENST00000491867 ACTN1P12814 892 aa16.65■□□□□ 0.26
ATG4B-222ENST00000491867 C16orf86Q6ZW13 317 aa16.65■□□□□ 0.26
ATG4B-222ENST00000491867 HERC6Q8IVU3 1022 aa16.65■□□□□ 0.26
ATG4B-222ENST00000491867 PHOSPHO2Q8TCD6 241 aa16.65■□□□□ 0.26
ATG4B-222ENST00000491867 ATP8A2Q9NTI2 1148 aa16.65■□□□□ 0.26
ATG4B-222ENST00000491867 TRMT13Q9NUP7 481 aaKnown RBP16.65■□□□□ 0.26
ATG4B-222ENST00000491867 FBXO40Q9UH90 709 aa16.65■□□□□ 0.26
ATG4B-222ENST00000491867 BAZ2AQ9UIF9 1905 aaKnown RBP16.64■□□□□ 0.26
ATG4B-222ENST00000491867 SCN5AQ14524 2016 aa16.64■□□□□ 0.25
ATG4B-222ENST00000491867 KIF28PB7ZC32 967 aa16.64■□□□□ 0.25
ATG4B-222ENST00000491867 USP17L12C9JPN9 530 aa16.64■□□□□ 0.25
ATG4B-222ENST00000491867 USP17L21D6R901 530 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms