RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 PARP1P09874 1014 aaKnown RBP18.42■□□□□ 0.54
LMX1A-204ENST00000489443 ALAS1P13196 640 aa18.42■□□□□ 0.54
LMX1A-204ENST00000489443 WTAPQ15007 396 aa18.42■□□□□ 0.54
LMX1A-204ENST00000489443 TMEM67Q5HYA8 995 aa18.42■□□□□ 0.54
LMX1A-204ENST00000489443 CHST13Q8NET6 341 aa18.42■□□□□ 0.54
LMX1A-204ENST00000489443 DDX11Q96FC9 970 aa18.42■□□□□ 0.54
LMX1A-204ENST00000489443 DEFB118Q96PH6 123 aa18.42■□□□□ 0.54
LMX1A-204ENST00000489443 UBA5Q9GZZ9 404 aa18.42■□□□□ 0.54
LMX1A-204ENST00000489443 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.42■□□□□ 0.54
LMX1A-204ENST00000489443 CPVLQ9H3G5 476 aa18.42■□□□□ 0.54
LMX1A-204ENST00000489443 SENP2Q9HC62 589 aa18.42■□□□□ 0.54
LMX1A-204ENST00000489443 FBXO40Q9UH90 709 aa18.42■□□□□ 0.54
LMX1A-204ENST00000489443 RPTORQ8N122 1335 aa18.42■□□□□ 0.54
LMX1A-204ENST00000489443 MKI67P46013 3256 aaKnown RBP18.41■□□□□ 0.54
LMX1A-204ENST00000489443 PRC1O43663 620 aa18.41■□□□□ 0.54
LMX1A-204ENST00000489443 CYP2C19P33261 490 aa18.41■□□□□ 0.54
LMX1A-204ENST00000489443 MCM5P33992 734 aa18.41■□□□□ 0.54
LMX1A-204ENST00000489443 ASPRV1Q53RT3 343 aa18.41■□□□□ 0.54
LMX1A-204ENST00000489443 ANKRD35Q8N283 1001 aa18.41■□□□□ 0.54
LMX1A-204ENST00000489443 RANBP17Q9H2T7 1088 aaKnown RBP18.41■□□□□ 0.54
LMX1A-204ENST00000489443 RNF146Q9NTX7 359 aa18.41■□□□□ 0.54
LMX1A-204ENST00000489443 CCPG1Q9ULG6 757 aa18.41■□□□□ 0.54
LMX1A-204ENST00000489443 PLXNA1Q9UIW2 1896 aa18.41■□□□□ 0.54
LMX1A-204ENST00000489443 TFRCP02786 760 aaKnown RBP18.4■□□□□ 0.54
LMX1A-204ENST00000489443 ICAM1P05362 532 aa18.4■□□□□ 0.54
LMX1A-204ENST00000489443 GJA8P48165 433 aa18.4■□□□□ 0.54
LMX1A-204ENST00000489443 COL9A3Q14050 684 aaPredicted RBP18.4■□□□□ 0.54
LMX1A-204ENST00000489443 TKFCQ3LXA3 575 aa18.4■□□□□ 0.54
LMX1A-204ENST00000489443 MAP3K21Q5TCX8 1036 aa18.4■□□□□ 0.54
LMX1A-204ENST00000489443 RASEFQ8IZ41 740 aa18.4■□□□□ 0.54
LMX1A-204ENST00000489443 IGDCC4Q8TDY8 1250 aa18.4■□□□□ 0.54
LMX1A-204ENST00000489443 U2AF1L4Q8WU68 220 aaKnown RBP18.4■□□□□ 0.54
LMX1A-204ENST00000489443 TRERF1Q96PN7 1200 aa18.4■□□□□ 0.54
LMX1A-204ENST00000489443 ACAD9Q9H845 621 aa18.4■□□□□ 0.54
LMX1A-204ENST00000489443 PAK6Q9NQU5 681 aaPredicted RBP18.4■□□□□ 0.54
LMX1A-204ENST00000489443 GPHNQ9NQX3 736 aaPredicted RBP18.4■□□□□ 0.54
LMX1A-204ENST00000489443 DHX16O60231 1041 aaKnown RBP18.39■□□□□ 0.53
LMX1A-204ENST00000489443 REC8O95072 547 aa18.39■□□□□ 0.53
LMX1A-204ENST00000489443 SGPL1O95470 568 aa18.39■□□□□ 0.53
LMX1A-204ENST00000489443 TAL1P17542 331 aaPredicted RBP18.39■□□□□ 0.53
LMX1A-204ENST00000489443 ZNF792Q3KQV3 632 aa18.39■□□□□ 0.53
LMX1A-204ENST00000489443 OLFML2BQ68BL8 750 aa18.39■□□□□ 0.53
LMX1A-204ENST00000489443 STAG2Q8N3U4 1231 aa18.39■□□□□ 0.53
LMX1A-204ENST00000489443 MAML3Q96JK9 1138 aa18.39■□□□□ 0.53
LMX1A-204ENST00000489443 VAT1LQ9HCJ6 419 aa18.39■□□□□ 0.53
LMX1A-204ENST00000489443 PDE4DIPQ5VU43 2346 aa18.39■□□□□ 0.53
LMX1A-204ENST00000489443 CNGA1P29973 690 aa18.38■□□□□ 0.53
LMX1A-204ENST00000489443 CCND3P30281 292 aaPredicted RBP18.38■□□□□ 0.53
LMX1A-204ENST00000489443 MUM1L1Q5H9M0 696 aa18.38■□□□□ 0.53
LMX1A-204ENST00000489443 CATIPQ7Z7H3 387 aa18.38■□□□□ 0.53
LMX1A-204ENST00000489443 ADGRF4Q8IZF3 695 aa18.38■□□□□ 0.53
LMX1A-204ENST00000489443 SHISA4Q96DD7 197 aa18.38■□□□□ 0.53
LMX1A-204ENST00000489443 LRRC2Q9BYS8 371 aa18.38■□□□□ 0.53
LMX1A-204ENST00000489443 LY9Q9HBG7 655 aa18.38■□□□□ 0.53
LMX1A-204ENST00000489443 KLRF2D3W0D1 207 aa18.37■□□□□ 0.53
LMX1A-204ENST00000489443 NFXL1Q6ZNB6 911 aa18.37■□□□□ 0.53
LMX1A-204ENST00000489443 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.37■□□□□ 0.53
LMX1A-204ENST00000489443 TMEM87BQ96K49 555 aa18.37■□□□□ 0.53
LMX1A-204ENST00000489443 NEK1Q96PY6 1258 aa18.37■□□□□ 0.53
LMX1A-204ENST00000489443 MAD2L2Q9UI95 211 aa18.37■□□□□ 0.53
LMX1A-204ENST00000489443 DIS3Q9Y2L1 958 aaKnown RBP18.37■□□□□ 0.53
LMX1A-204ENST00000489443 MYH6P13533 1939 aa18.37■□□□□ 0.53
LMX1A-204ENST00000489443 BAZ2BQ9UIF8 2168 aaKnown RBP18.37■□□□□ 0.53
LMX1A-204ENST00000489443 DNAJC25-GNG10A0A024R161 153 aa18.36■□□□□ 0.53
LMX1A-204ENST00000489443 IGHA2P01877 340 aa18.36■□□□□ 0.53
LMX1A-204ENST00000489443 KRT32Q14532 448 aa18.36■□□□□ 0.53
LMX1A-204ENST00000489443 GRM4Q14833 912 aa18.36■□□□□ 0.53
LMX1A-204ENST00000489443 ADCK5Q3MIX3 580 aa18.36■□□□□ 0.53
LMX1A-204ENST00000489443 TSGA10IPQ3SY00 556 aa18.36■□□□□ 0.53
LMX1A-204ENST00000489443 PRAMEF19Q5SWL8 479 aa18.36■□□□□ 0.53
LMX1A-204ENST00000489443 NSMFQ6X4W1 530 aa18.36■□□□□ 0.53
LMX1A-204ENST00000489443 NUP133Q8WUM0 1156 aa18.36■□□□□ 0.53
LMX1A-204ENST00000489443 TINF2Q9BSI4 451 aa18.36■□□□□ 0.53
LMX1A-204ENST00000489443 MTA3Q9BTC8 594 aa18.36■□□□□ 0.53
LMX1A-204ENST00000489443 A1CFQ9NQ94 594 aaKnown RBP18.36■□□□□ 0.53
LMX1A-204ENST00000489443 PALM3A6NDB9 673 aaPredicted RBP18.35■□□□□ 0.53
LMX1A-204ENST00000489443 CCDC69A6NI79 296 aa18.35■□□□□ 0.53
LMX1A-204ENST00000489443 POTEB2H3BUK9 544 aa18.35■□□□□ 0.53
LMX1A-204ENST00000489443 SH2B2O14492 632 aaPredicted RBP18.35■□□□□ 0.53
LMX1A-204ENST00000489443 CNTN2Q02246 1040 aa18.35■□□□□ 0.53
LMX1A-204ENST00000489443 TROAPQ12815 778 aa18.35■□□□□ 0.53
LMX1A-204ENST00000489443 CDC37Q16543 378 aaPredicted RBP18.35■□□□□ 0.53
LMX1A-204ENST00000489443 USH1GQ495M9 461 aa18.35■□□□□ 0.53
LMX1A-204ENST00000489443 ZNF654Q8IZM8 581 aa18.35■□□□□ 0.53
LMX1A-204ENST00000489443 TMTC2Q8N394 836 aa18.35■□□□□ 0.53
LMX1A-204ENST00000489443 TRPV1Q8NER1 839 aa18.35■□□□□ 0.53
LMX1A-204ENST00000489443 MYL10Q9BUA6 226 aa18.35■□□□□ 0.53
LMX1A-204ENST00000489443 JMJD4Q9H9V9 463 aa18.35■□□□□ 0.53
LMX1A-204ENST00000489443 PNMA2Q9UL42 364 aa18.35■□□□□ 0.53
LMX1A-204ENST00000489443 PFASO15067 1338 aa18.34■□□□□ 0.53
LMX1A-204ENST00000489443 WDR19Q8NEZ3 1342 aa18.34■□□□□ 0.53
LMX1A-204ENST00000489443 CYBAP13498 195 aa18.34■□□□□ 0.53
LMX1A-204ENST00000489443 HSPA4P34932 840 aa18.34■□□□□ 0.53
LMX1A-204ENST00000489443 TCEANC2Q96MN5 208 aa18.34■□□□□ 0.53
LMX1A-204ENST00000489443 CRISPLD2Q9H0B8 497 aa18.34■□□□□ 0.53
LMX1A-204ENST00000489443 NFIBO00712 420 aa18.33■□□□□ 0.52
LMX1A-204ENST00000489443 LIFRP42702 1097 aa18.33■□□□□ 0.52
LMX1A-204ENST00000489443 QRICH1Q2TAL8 776 aa18.33■□□□□ 0.52
LMX1A-204ENST00000489443 DHX32Q7L7V1 743 aaKnown RBP18.33■□□□□ 0.52
LMX1A-204ENST00000489443 KCNB2Q92953 911 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms