RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 ALAS1P13196 640 aa15.04■□□□□ -0
PHF1-210ENST00000488767 SEC23AQ15436 765 aa15.04■□□□□ -0
PHF1-210ENST00000488767 OLFML2BQ68BL8 750 aa15.04■□□□□ -0
PHF1-210ENST00000488767 TTBK2Q6IQ55 1244 aa15.04■□□□□ -0
PHF1-210ENST00000488767 CHST3Q7LGC8 479 aa15.04■□□□□ -0
PHF1-210ENST00000488767 TRERF1Q96PN7 1200 aa15.04■□□□□ -0
PHF1-210ENST00000488767 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.04■□□□□ -02e-7■■□□□ 12
PHF1-210ENST00000488767 UNC93B1Q9H1C4 597 aa15.04■□□□□ -0
PHF1-210ENST00000488767 RNF146Q9NTX7 359 aa15.04■□□□□ -0
PHF1-210ENST00000488767 DIS3Q9Y2L1 958 aaKnown RBP15.04■□□□□ -0
PHF1-210ENST00000488767 TAF6LQ9Y6J9 622 aa15.04■□□□□ -0
PHF1-210ENST00000488767 ZNF236Q9UL36 1845 aa15.03■□□□□ -0
PHF1-210ENST00000488767 PFASO15067 1338 aa15.03■□□□□ -0
PHF1-210ENST00000488767 KIF5BP33176 963 aa15.03■□□□□ -0
PHF1-210ENST00000488767 RGS19P49795 217 aa15.03■□□□□ -0
PHF1-210ENST00000488767 FGD1P98174 961 aa15.03■□□□□ -0
PHF1-210ENST00000488767 CCL14Q16627 93 aa15.03■□□□□ -0
PHF1-210ENST00000488767 SYNE3Q6ZMZ3 975 aa15.03■□□□□ -0
PHF1-210ENST00000488767 CTCFLQ8NI51 663 aaPredicted RBP15.03■□□□□ -0
PHF1-210ENST00000488767 AGBL1Q96MI9 1066 aa15.03■□□□□ -0
PHF1-210ENST00000488767 NEK1Q96PY6 1258 aa15.03■□□□□ -0
PHF1-210ENST00000488767 PLXNB2O15031 1838 aa15.03■□□□□ -0
PHF1-210ENST00000488767 COL11A1P12107 1806 aaPredicted RBP15.03■□□□□ -0
PHF1-210ENST00000488767 POTEFA5A3E0 1075 aa15.02■□□□□ -0
PHF1-210ENST00000488767 TFRCP02786 760 aaKnown RBP15.02■□□□□ -0
PHF1-210ENST00000488767 PGK2P07205 417 aa15.02■□□□□ -0
PHF1-210ENST00000488767 CALM1P0DP23 149 aa15.02■□□□□ -0
PHF1-210ENST00000488767 CALM2P0DP24 149 aa15.02■□□□□ -0
PHF1-210ENST00000488767 CALM3P0DP25 149 aa15.02■□□□□ -0
PHF1-210ENST00000488767 GJA8P48165 433 aa15.02■□□□□ -0
PHF1-210ENST00000488767 SNAP25P60880 206 aa15.02■□□□□ -0
PHF1-210ENST00000488767 TRAF1Q13077 416 aa15.02■□□□□ -0
PHF1-210ENST00000488767 NPLOC4Q8TAT6 608 aa15.02■□□□□ -0
PHF1-210ENST00000488767 KCNB2Q92953 911 aa15.02■□□□□ -0
PHF1-210ENST00000488767 MAML3Q96JK9 1138 aa15.02■□□□□ -0
PHF1-210ENST00000488767 DEFB118Q96PH6 123 aa15.02■□□□□ -0
PHF1-210ENST00000488767 UBA5Q9GZZ9 404 aa15.02■□□□□ -0
PHF1-210ENST00000488767 PAK6Q9NQU5 681 aaPredicted RBP15.02■□□□□ -0
PHF1-210ENST00000488767 CNPY2Q9Y2B0 182 aa15.02■□□□□ -0
PHF1-210ENST00000488767 RIPK3Q9Y572 518 aa15.02■□□□□ -0
PHF1-210ENST00000488767 ZNF536O15090 1300 aa15.01□□□□□ -0.01
PHF1-210ENST00000488767 WDR19Q8NEZ3 1342 aa15.01□□□□□ -0.01
PHF1-210ENST00000488767 KLRF2D3W0D1 207 aa15.01□□□□□ -0.01
PHF1-210ENST00000488767 POTEB2H3BUK9 544 aa15.01□□□□□ -0.01
PHF1-210ENST00000488767 MSCO60682 206 aa15.01□□□□□ -0.01
PHF1-210ENST00000488767 COBLO75128 1261 aa15.01□□□□□ -0.01
PHF1-210ENST00000488767 DDAH1O94760 285 aa15.01□□□□□ -0.01
PHF1-210ENST00000488767 SGPL1O95470 568 aa15.01□□□□□ -0.01
PHF1-210ENST00000488767 EN2P19622 333 aaPredicted RBP15.01□□□□□ -0.01
PHF1-210ENST00000488767 PSMA5P28066 241 aa15.01□□□□□ -0.01
PHF1-210ENST00000488767 CNGA1P29973 690 aa15.01□□□□□ -0.01
PHF1-210ENST00000488767 ANTXR2P58335 489 aa15.01□□□□□ -0.01
PHF1-210ENST00000488767 CACNB2Q08289 660 aaPredicted RBP15.01□□□□□ -0.01
PHF1-210ENST00000488767 CDC37Q16543 378 aaPredicted RBP15.01□□□□□ -0.01
PHF1-210ENST00000488767 MAP3K21Q5TCX8 1036 aa15.01□□□□□ -0.01
PHF1-210ENST00000488767 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.01□□□□□ -0.01
PHF1-210ENST00000488767 MSL3Q8N5Y2 521 aaKnown RBP15.01□□□□□ -0.01
PHF1-210ENST00000488767 IGDCC4Q8TDY8 1250 aa15.01□□□□□ -0.01
PHF1-210ENST00000488767 U2AF1L4Q8WU68 220 aaKnown RBP15.01□□□□□ -0.01
PHF1-210ENST00000488767 NUP133Q8WUM0 1156 aa15.01□□□□□ -0.01
PHF1-210ENST00000488767 SLC12A7Q9Y666 1083 aa15.01□□□□□ -0.01
PHF1-210ENST00000488767 CENPFP49454 3210 aa15.01□□□□□ -0.01
PHF1-210ENST00000488767 DOCK3Q8IZD9 2030 aa15□□□□□ -0.01
PHF1-210ENST00000488767 SH2B2O14492 632 aaPredicted RBP15□□□□□ -0.01
PHF1-210ENST00000488767 CYP2C19P33261 490 aa15□□□□□ -0.01
PHF1-210ENST00000488767 HSPA4P34932 840 aa15□□□□□ -0.01
PHF1-210ENST00000488767 LIFRP42702 1097 aa15□□□□□ -0.01
PHF1-210ENST00000488767 GNAQP50148 359 aa15□□□□□ -0.01
PHF1-210ENST00000488767 TRIM32Q13049 653 aa15□□□□□ -0.01
PHF1-210ENST00000488767 GRM4Q14833 912 aa15□□□□□ -0.01
PHF1-210ENST00000488767 NSMFQ6X4W1 530 aa15□□□□□ -0.01
PHF1-210ENST00000488767 DHX32Q7L7V1 743 aaKnown RBP15□□□□□ -0.01
PHF1-210ENST00000488767 ADGRF4Q8IZF3 695 aa15□□□□□ -0.01
PHF1-210ENST00000488767 ZNF654Q8IZM8 581 aa15□□□□□ -0.01
PHF1-210ENST00000488767 MPHOSPH6Q99547 160 aaKnown RBP15□□□□□ -0.01
PHF1-210ENST00000488767 MAP3K14Q99558 947 aa15□□□□□ -0.01
PHF1-210ENST00000488767 LY9Q9HBG7 655 aa15□□□□□ -0.01
PHF1-210ENST00000488767 VAT1LQ9HCJ6 419 aa15□□□□□ -0.01
PHF1-210ENST00000488767 FLRT1Q9NZU1 646 aa15□□□□□ -0.01
PHF1-210ENST00000488767 NRBP1Q9UHY1 535 aa15□□□□□ -0.01
PHF1-210ENST00000488767 RBBP6Q7Z6E9 1792 aaKnown RBP14.99□□□□□ -0.01
PHF1-210ENST00000488767 TROAPQ12815 778 aa14.99□□□□□ -0.01
PHF1-210ENST00000488767 ZNF792Q3KQV3 632 aa14.99□□□□□ -0.01
PHF1-210ENST00000488767 USH1GQ495M9 461 aa14.99□□□□□ -0.01
PHF1-210ENST00000488767 BLOC1S2Q6QNY1 142 aa14.99□□□□□ -0.01
PHF1-210ENST00000488767 ZNF467Q7Z7K2 595 aaPredicted RBP14.99□□□□□ -0.01
PHF1-210ENST00000488767 LZTS2Q9BRK4 669 aa14.99□□□□□ -0.01
PHF1-210ENST00000488767 TINF2Q9BSI4 451 aa14.99□□□□□ -0.01
PHF1-210ENST00000488767 A1CFQ9NQ94 594 aaKnown RBP14.99□□□□□ -0.01
PHF1-210ENST00000488767 MAD2L2Q9UI95 211 aa14.99□□□□□ -0.01
PHF1-210ENST00000488767 ABCB11O95342 1321 aa14.98□□□□□ -0.01
PHF1-210ENST00000488767 SYNGAP1Q96PV0 1343 aa14.98□□□□□ -0.01
PHF1-210ENST00000488767 PTPDC1A2A3K4 754 aa14.98□□□□□ -0.01
PHF1-210ENST00000488767 PALM3A6NDB9 673 aaPredicted RBP14.98□□□□□ -0.01
PHF1-210ENST00000488767 FBXO11Q86XK2 927 aa14.98□□□□□ -0.01
PHF1-210ENST00000488767 MCF2L2Q86YR7 1114 aa14.98□□□□□ -0.01
PHF1-210ENST00000488767 JAKMIP1Q96N16 626 aaKnown RBP14.98□□□□□ -0.01
PHF1-210ENST00000488767 AMNQ9BXJ7 453 aa14.98□□□□□ -0.01
PHF1-210ENST00000488767 CYP39A1Q9NYL5 469 aa14.98□□□□□ -0.01
PHF1-210ENST00000488767 ADD3Q9UEY8 706 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms