RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 SH2B2O14492 632 aaPredicted RBP14.58□□□□□ -0.08
APTX-220ENST00000476858 PLA2G6O60733 806 aa14.58□□□□□ -0.08
APTX-220ENST00000476858 CCL5P13501 91 aa14.58□□□□□ -0.08
APTX-220ENST00000476858 TRDNQ13061 729 aa14.58□□□□□ -0.08
APTX-220ENST00000476858 TMEM67Q5HYA8 995 aa14.58□□□□□ -0.08
APTX-220ENST00000476858 PPP4R3BQ5MIZ7 849 aa14.58□□□□□ -0.08
APTX-220ENST00000476858 CASC1Q6TDU7 716 aa14.58□□□□□ -0.08
APTX-220ENST00000476858 FAM160B2Q86V87 743 aa14.58□□□□□ -0.08
APTX-220ENST00000476858 SLAIN1Q8ND83 568 aa14.58□□□□□ -0.08
APTX-220ENST00000476858 TRPV1Q8NER1 839 aa14.58□□□□□ -0.08
APTX-220ENST00000476858 KCNB2Q92953 911 aa14.58□□□□□ -0.08
APTX-220ENST00000476858 SHISA4Q96DD7 197 aa14.58□□□□□ -0.08
APTX-220ENST00000476858 FGD4Q96M96 766 aa14.58□□□□□ -0.08
APTX-220ENST00000476858 TEX13BQ9BXU2 312 aa14.58□□□□□ -0.08
APTX-220ENST00000476858 RANBP17Q9H2T7 1088 aaKnown RBP14.58□□□□□ -0.08
APTX-220ENST00000476858 CWC22Q9HCG8 908 aaKnown RBP14.58□□□□□ -0.08
APTX-220ENST00000476858 BIN2Q9UBW5 565 aaPredicted RBP14.58□□□□□ -0.08
APTX-220ENST00000476858 MAD2L2Q9UI95 211 aa14.58□□□□□ -0.08
APTX-220ENST00000476858 ATP2A1O14983 1001 aa14.57□□□□□ -0.08
APTX-220ENST00000476858 RXRAP19793 462 aa14.57□□□□□ -0.08
APTX-220ENST00000476858 CYP2C19P33261 490 aa14.57□□□□□ -0.08
APTX-220ENST00000476858 HSPA4P34932 840 aa14.57□□□□□ -0.08
APTX-220ENST00000476858 EXOSC10Q01780 885 aaKnown RBP14.57□□□□□ -0.08
APTX-220ENST00000476858 CACNB2Q08289 660 aaPredicted RBP14.57□□□□□ -0.08
APTX-220ENST00000476858 PXYLP1Q8TE99 480 aa14.57□□□□□ -0.08
APTX-220ENST00000476858 CHURC1Q8WUH1 139 aa14.57□□□□□ -0.08
APTX-220ENST00000476858 APBA2Q99767 749 aa14.57□□□□□ -0.08
APTX-220ENST00000476858 USP26Q9BXU7 913 aa14.57□□□□□ -0.08
APTX-220ENST00000476858 MROH8Q9H579 483 aa14.57□□□□□ -0.08
APTX-220ENST00000476858 PPP1R11O60927 126 aaPredicted RBP14.56□□□□□ -0.08
APTX-220ENST00000476858 ALAS1P13196 640 aa14.56□□□□□ -0.08
APTX-220ENST00000476858 CCND3P30281 292 aaPredicted RBP14.56□□□□□ -0.08
APTX-220ENST00000476858 RGS2P41220 211 aa14.56□□□□□ -0.08
APTX-220ENST00000476858 TROAPQ12815 778 aa14.56□□□□□ -0.08
APTX-220ENST00000476858 WTAPQ15007 396 aa14.56□□□□□ -0.08
APTX-220ENST00000476858 PRAMEF19Q5SWL8 479 aa14.56□□□□□ -0.08
APTX-220ENST00000476858 ADGRF4Q8IZF3 695 aa14.56□□□□□ -0.08
APTX-220ENST00000476858 SOCS4Q8WXH5 440 aa14.56□□□□□ -0.08
APTX-220ENST00000476858 MMP19Q99542 508 aa14.56□□□□□ -0.08
APTX-220ENST00000476858 VAT1LQ9HCJ6 419 aa14.56□□□□□ -0.08
APTX-220ENST00000476858 IVNS1ABPQ9Y6Y0 642 aa14.56□□□□□ -0.08
APTX-220ENST00000476858 ASTN1O14525 1302 aa14.56□□□□□ -0.08
APTX-220ENST00000476858 TNRC18O15417 2968 aaPredicted RBP14.56□□□□□ -0.08
APTX-220ENST00000476858 LCTP09848 1927 aa14.56□□□□□ -0.08
APTX-220ENST00000476858 ZNFX1Q9P2E3 1918 aaKnown RBP14.56□□□□□ -0.08
APTX-220ENST00000476858 MKI67P46013 3256 aaKnown RBP14.55□□□□□ -0.08
APTX-220ENST00000476858 PALM3A6NDB9 673 aaPredicted RBP14.55□□□□□ -0.08
APTX-220ENST00000476858 NFIBO00712 420 aa14.55□□□□□ -0.08
APTX-220ENST00000476858 CYTH3O43739 400 aa14.55□□□□□ -0.08
APTX-220ENST00000476858 SLC25A27O95847 323 aa14.55□□□□□ -0.08
APTX-220ENST00000476858 HMGCRP04035 888 aa14.55□□□□□ -0.08
APTX-220ENST00000476858 HOXC6P09630 235 aa14.55□□□□□ -0.08
APTX-220ENST00000476858 XRCC5P13010 732 aaKnown RBP14.55□□□□□ -0.08
APTX-220ENST00000476858 ZKSCAN1P17029 563 aaPredicted RBP14.55□□□□□ -0.08
APTX-220ENST00000476858 CNTN2Q02246 1040 aa14.55□□□□□ -0.08
APTX-220ENST00000476858 GRM4Q14833 912 aa14.55□□□□□ -0.08
APTX-220ENST00000476858 ZNF792Q3KQV3 632 aa14.55□□□□□ -0.08
APTX-220ENST00000476858 TSGA10IPQ3SY00 556 aa14.55□□□□□ -0.08
APTX-220ENST00000476858 CCDC178Q5BJE1 867 aa14.55□□□□□ -0.08
APTX-220ENST00000476858 MAP3K21Q5TCX8 1036 aa14.55□□□□□ -0.08
APTX-220ENST00000476858 CCDC144CPQ8IYA2 1237 aa14.55□□□□□ -0.08
APTX-220ENST00000476858 CMTR1Q8N1G2 835 aaKnown RBP14.55□□□□□ -0.08
APTX-220ENST00000476858 NEK1Q96PY6 1258 aa14.55□□□□□ -0.08
APTX-220ENST00000476858 JMJD4Q9H9V9 463 aa14.55□□□□□ -0.08
APTX-220ENST00000476858 RNF146Q9NTX7 359 aa14.55□□□□□ -0.08
APTX-220ENST00000476858 BRPF3Q9ULD4 1205 aa14.55□□□□□ -0.08
APTX-220ENST00000476858 RBBP6Q7Z6E9 1792 aaKnown RBP14.55□□□□□ -0.08
APTX-220ENST00000476858 DNAJC25-GNG10A0A024R161 153 aa14.54□□□□□ -0.08
APTX-220ENST00000476858 ICAM1P05362 532 aa14.54□□□□□ -0.08
APTX-220ENST00000476858 PARP1P09874 1014 aaKnown RBP14.54□□□□□ -0.08
APTX-220ENST00000476858 FCER1AP12319 257 aa14.54□□□□□ -0.08
APTX-220ENST00000476858 MCM5P33992 734 aa14.54□□□□□ -0.08
APTX-220ENST00000476858 DPP9Q86TI2 863 aa14.54□□□□□ -0.08
APTX-220ENST00000476858 ZNF654Q8IZM8 581 aa14.54□□□□□ -0.08
APTX-220ENST00000476858 CLEC4DQ8WXI8 215 aa14.54□□□□□ -0.08
APTX-220ENST00000476858 TBC1D5Q92609 795 aa14.54□□□□□ -0.08
APTX-220ENST00000476858 MAML3Q96JK9 1138 aa14.54□□□□□ -0.08
APTX-220ENST00000476858 JAKMIP1Q96N16 626 aaKnown RBP14.54□□□□□ -0.08
APTX-220ENST00000476858 TRERF1Q96PN7 1200 aa14.54□□□□□ -0.08
APTX-220ENST00000476858 RNF208Q9H0X6 261 aa14.54□□□□□ -0.08
APTX-220ENST00000476858 A1CFQ9NQ94 594 aaKnown RBP14.54□□□□□ -0.08
APTX-220ENST00000476858 CCPG1Q9ULG6 757 aa14.54□□□□□ -0.08
APTX-220ENST00000476858 CTDP1Q9Y5B0 961 aaPredicted RBP14.54□□□□□ -0.08
APTX-220ENST00000476858 PLXNA1Q9UIW2 1896 aa14.53□□□□□ -0.08
APTX-220ENST00000476858 KLRF2D3W0D1 207 aa14.53□□□□□ -0.08
APTX-220ENST00000476858 STRNO43815 780 aa14.53□□□□□ -0.08
APTX-220ENST00000476858 PLEKHA8P1O95397 391 aa14.53□□□□□ -0.08
APTX-220ENST00000476858 NT5C2P49902 561 aa14.53□□□□□ -0.08
APTX-220ENST00000476858 OAZ1P54368 228 aa14.53□□□□□ -0.08
APTX-220ENST00000476858 CDC37Q16543 378 aaPredicted RBP14.53□□□□□ -0.08
APTX-220ENST00000476858 QRICH1Q2TAL8 776 aa14.53□□□□□ -0.08
APTX-220ENST00000476858 USH1GQ495M9 461 aa14.53□□□□□ -0.08
APTX-220ENST00000476858 ASPRV1Q53RT3 343 aa14.53□□□□□ -0.08
APTX-220ENST00000476858 ABRAQ8N0Z2 381 aa14.53□□□□□ -0.08
APTX-220ENST00000476858 NUP133Q8WUM0 1156 aa14.53□□□□□ -0.08
APTX-220ENST00000476858 PIBF1Q8WXW3 757 aa14.53□□□□□ -0.08
APTX-220ENST00000476858 DEFB118Q96PH6 123 aa14.53□□□□□ -0.08
APTX-220ENST00000476858 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.53□□□□□ -0.08
APTX-220ENST00000476858 PAK6Q9NQU5 681 aaPredicted RBP14.53□□□□□ -0.08
APTX-220ENST00000476858 SOWAHBA6NEL2 793 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms