RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 SYNPO2Q9UMS6 1093 aa13.97□□□□□ -0.17
CLIP2-204ENST00000474962 KBTBD13C9JR72 458 aa13.96□□□□□ -0.17
CLIP2-204ENST00000474962 SGSM2O43147 1006 aa13.96□□□□□ -0.17
CLIP2-204ENST00000474962 PGK1P00558 417 aa13.96□□□□□ -0.17
CLIP2-204ENST00000474962 FGRP09769 529 aa13.96□□□□□ -0.17
CLIP2-204ENST00000474962 HSPD1P10809 573 aaKnown RBP13.96□□□□□ -0.17
CLIP2-204ENST00000474962 RTP1P59025 263 aa13.96□□□□□ -0.17
CLIP2-204ENST00000474962 RCSD1Q6JBY9 416 aa13.96□□□□□ -0.17
CLIP2-204ENST00000474962 KCTD1Q719H9 257 aa13.96□□□□□ -0.17
CLIP2-204ENST00000474962 ANKRD35Q8N283 1001 aa13.96□□□□□ -0.17
CLIP2-204ENST00000474962 STAG1Q8WVM7 1258 aa13.96□□□□□ -0.17
CLIP2-204ENST00000474962 LENG1Q96BZ8 264 aaPredicted RBP13.96□□□□□ -0.17
CLIP2-204ENST00000474962 GMCL1Q96IK5 515 aa13.96□□□□□ -0.17
CLIP2-204ENST00000474962 AGBL1Q96MI9 1066 aa13.96□□□□□ -0.17
CLIP2-204ENST00000474962 ESYT1Q9BSJ8 1104 aa13.96□□□□□ -0.17
CLIP2-204ENST00000474962 XPNPEP3Q9NQH7 507 aa13.96□□□□□ -0.17
CLIP2-204ENST00000474962 HOMER2Q9NSB8 354 aa13.96□□□□□ -0.17
CLIP2-204ENST00000474962 NRBP1Q9UHY1 535 aa13.96□□□□□ -0.17
CLIP2-204ENST00000474962 CTNNA3Q9UI47 895 aa13.96□□□□□ -0.17
CLIP2-204ENST00000474962 MTMR7Q9Y216 660 aa13.96□□□□□ -0.17
CLIP2-204ENST00000474962 ATP11BQ9Y2G3 1177 aa13.96□□□□□ -0.17
CLIP2-204ENST00000474962 PLIN4Q96Q06 1357 aa13.96□□□□□ -0.18
CLIP2-204ENST00000474962 ZNF236Q9UL36 1845 aa13.95□□□□□ -0.18
CLIP2-204ENST00000474962 EIF5BO60841 1220 aaKnown RBP13.95□□□□□ -0.18
CLIP2-204ENST00000474962 RARBP10826 455 aa13.95□□□□□ -0.18
CLIP2-204ENST00000474962 STAT2P52630 851 aa13.95□□□□□ -0.18
CLIP2-204ENST00000474962 HAND2P61296 217 aa13.95□□□□□ -0.18
CLIP2-204ENST00000474962 CNTN2Q02246 1040 aa13.95□□□□□ -0.18
CLIP2-204ENST00000474962 IKQ13123 557 aaPredicted RBP13.95□□□□□ -0.18
CLIP2-204ENST00000474962 RRP12Q5JTH9 1297 aaKnown RBP13.95□□□□□ -0.18
CLIP2-204ENST00000474962 RASGRP2Q7LDG7 609 aa13.95□□□□□ -0.18
CLIP2-204ENST00000474962 CHURC1Q8WUH1 139 aa13.95□□□□□ -0.18
CLIP2-204ENST00000474962 DSCC1Q9BVC3 393 aa13.95□□□□□ -0.18
CLIP2-204ENST00000474962 CNPY2Q9Y2B0 182 aa13.95□□□□□ -0.18
CLIP2-204ENST00000474962 ZNF536O15090 1300 aa13.94□□□□□ -0.18
CLIP2-204ENST00000474962 MYH4Q9Y623 1939 aa13.94□□□□□ -0.18
CLIP2-204ENST00000474962 ORC4O43929 436 aa13.94□□□□□ -0.18
CLIP2-204ENST00000474962 NOVP48745 357 aa13.94□□□□□ -0.18
CLIP2-204ENST00000474962 OAZ1P54368 228 aa13.94□□□□□ -0.18
CLIP2-204ENST00000474962 MAMDC4Q6UXC1 1216 aa13.94□□□□□ -0.18
CLIP2-204ENST00000474962 TDHQ8IZJ6 230 aa13.94□□□□□ -0.18
CLIP2-204ENST00000474962 CHST13Q8NET6 341 aa13.94□□□□□ -0.18
CLIP2-204ENST00000474962 FGD4Q96M96 766 aa13.94□□□□□ -0.18
CLIP2-204ENST00000474962 ANO2Q9NQ90 1003 aa13.94□□□□□ -0.18
CLIP2-204ENST00000474962 TOMM22Q9NS69 142 aa13.94□□□□□ -0.18
CLIP2-204ENST00000474962 AKR1A1P14550 325 aa13.93□□□□□ -0.18
CLIP2-204ENST00000474962 IRX5P78411 483 aaPredicted RBP13.93□□□□□ -0.18
CLIP2-204ENST00000474962 TRIM60Q495X7 471 aa13.93□□□□□ -0.18
CLIP2-204ENST00000474962 TTBK2Q6IQ55 1244 aa13.93□□□□□ -0.18
CLIP2-204ENST00000474962 CCDC174Q6PII3 467 aa13.93□□□□□ -0.18
CLIP2-204ENST00000474962 SH3RF1Q7Z6J0 888 aa13.93□□□□□ -0.18
CLIP2-204ENST00000474962 FAM160B2Q86V87 743 aa13.93□□□□□ -0.18
CLIP2-204ENST00000474962 MSL3Q8N5Y2 521 aaKnown RBP13.93□□□□□ -0.18
CLIP2-204ENST00000474962 TMEM47Q9BQJ4 181 aa13.93□□□□□ -0.18
CLIP2-204ENST00000474962 ZHX1Q9UKY1 873 aaPredicted RBP13.93□□□□□ -0.18
CLIP2-204ENST00000474962 PRR12Q9ULL5 1215 aa13.93□□□□□ -0.18
CLIP2-204ENST00000474962 SYNGAP1Q96PV0 1343 aa13.92□□□□□ -0.18
CLIP2-204ENST00000474962 FRMPD3Q5JV73 1810 aa13.92□□□□□ -0.18
CLIP2-204ENST00000474962 TRIM43BA6NCK2 446 aa13.92□□□□□ -0.18
CLIP2-204ENST00000474962 ZNF213O14771 459 aa13.92□□□□□ -0.18
CLIP2-204ENST00000474962 PLA2G6O60733 806 aa13.92□□□□□ -0.18
CLIP2-204ENST00000474962 REC8O95072 547 aa13.92□□□□□ -0.18
CLIP2-204ENST00000474962 FDX1P10109 184 aa13.92□□□□□ -0.18
CLIP2-204ENST00000474962 SLC16A2P36021 539 aa13.92□□□□□ -0.18
CLIP2-204ENST00000474962 TLE2Q04725 743 aa13.92□□□□□ -0.18
CLIP2-204ENST00000474962 ACVR2BQ13705 512 aa13.92□□□□□ -0.18
CLIP2-204ENST00000474962 SNX17Q15036 470 aa13.92□□□□□ -0.18
CLIP2-204ENST00000474962 IMMTQ16891 758 aaKnown RBP13.92□□□□□ -0.18
CLIP2-204ENST00000474962 LRIT3Q3SXY7 679 aa13.92□□□□□ -0.18
CLIP2-204ENST00000474962 PPP4R3BQ5MIZ7 849 aa13.92□□□□□ -0.18
CLIP2-204ENST00000474962 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.92□□□□□ -0.18
CLIP2-204ENST00000474962 ZNF467Q7Z7K2 595 aaPredicted RBP13.92□□□□□ -0.18
CLIP2-204ENST00000474962 RNF180Q86T96 592 aa13.92□□□□□ -0.18
CLIP2-204ENST00000474962 TRIM43Q96BQ3 446 aaPredicted RBP13.92□□□□□ -0.18
CLIP2-204ENST00000474962 TRERF1Q96PN7 1200 aa13.92□□□□□ -0.18
CLIP2-204ENST00000474962 LBHD1Q9BQE6 289 aaPredicted RBP13.92□□□□□ -0.18
CLIP2-204ENST00000474962 PRDM5Q9NQX1 630 aaPredicted RBP13.92□□□□□ -0.18
CLIP2-204ENST00000474962 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.92□□□□□ -0.18
CLIP2-204ENST00000474962 FBXO40Q9UH90 709 aa13.92□□□□□ -0.18
CLIP2-204ENST00000474962 FAM184BQ9ULE4 1060 aa13.92□□□□□ -0.18
CLIP2-204ENST00000474962 PHF24Q9UPV7 400 aa13.92□□□□□ -0.18
CLIP2-204ENST00000474962 DDX49Q9Y6V7 483 aaKnown RBP13.92□□□□□ -0.18
CLIP2-204ENST00000474962 ZMYM6O95789 1325 aa13.91□□□□□ -0.18
CLIP2-204ENST00000474962 SOWAHBA6NEL2 793 aa13.91□□□□□ -0.18
CLIP2-204ENST00000474962 ADCY6O43306 1168 aa13.91□□□□□ -0.18
CLIP2-204ENST00000474962 ADAMTS4O75173 837 aa13.91□□□□□ -0.18
CLIP2-204ENST00000474962 ALAS1P13196 640 aa13.91□□□□□ -0.18
CLIP2-204ENST00000474962 KCNA10Q16322 511 aa13.91□□□□□ -0.18
CLIP2-204ENST00000474962 CCDC144BQ3MJ40 725 aa13.91□□□□□ -0.18
CLIP2-204ENST00000474962 MUM1L1Q5H9M0 696 aa13.91□□□□□ -0.18
CLIP2-204ENST00000474962 MFSD6Q6ZSS7 791 aa13.91□□□□□ -0.18
CLIP2-204ENST00000474962 ARMCX2Q7L311 632 aa13.91□□□□□ -0.18
CLIP2-204ENST00000474962 CCDC144CPQ8IYA2 1237 aa13.91□□□□□ -0.18
CLIP2-204ENST00000474962 ACAD9Q9H845 621 aa13.91□□□□□ -0.18
CLIP2-204ENST00000474962 GPCPD1Q9NPB8 672 aa13.91□□□□□ -0.18
CLIP2-204ENST00000474962 A1CFQ9NQ94 594 aaKnown RBP13.91□□□□□ -0.18
CLIP2-204ENST00000474962 RNF146Q9NTX7 359 aa13.91□□□□□ -0.18
CLIP2-204ENST00000474962 TCP11L1Q9NUJ3 509 aa13.91□□□□□ -0.18
CLIP2-204ENST00000474962 PRKAG2Q9UGJ0 569 aa13.91□□□□□ -0.18
CLIP2-204ENST00000474962 PLXNA1Q9UIW2 1896 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms