RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 CASC1Q6TDU7 716 aa10.73□□□□□ -0.69
SYN3-211ENST00000472027 CHST3Q7LGC8 479 aa10.73□□□□□ -0.69
SYN3-211ENST00000472027 RALYLQ86SE5 291 aaKnown RBP10.73□□□□□ -0.69
SYN3-211ENST00000472027 TRERF1Q96PN7 1200 aa10.73□□□□□ -0.69
SYN3-211ENST00000472027 RANBP17Q9H2T7 1088 aaKnown RBP10.73□□□□□ -0.69
SYN3-211ENST00000472027 HOMER2Q9NSB8 354 aa10.73□□□□□ -0.69
SYN3-211ENST00000472027 FBXO40Q9UH90 709 aa10.73□□□□□ -0.69
SYN3-211ENST00000472027 CENPFP49454 3210 aa10.73□□□□□ -0.69
SYN3-211ENST00000472027 RBBP6Q7Z6E9 1792 aaKnown RBP10.72□□□□□ -0.69
SYN3-211ENST00000472027 COL11A1P12107 1806 aaPredicted RBP10.72□□□□□ -0.69
SYN3-211ENST00000472027 LAMA4Q16363 1823 aa10.72□□□□□ -0.69
SYN3-211ENST00000472027 DNAJC25-GNG10A0A024R161 153 aa10.72□□□□□ -0.69
SYN3-211ENST00000472027 ERICH2A1L162 156 aa10.72□□□□□ -0.69
SYN3-211ENST00000472027 IFIT3O14879 490 aaKnown RBP10.72□□□□□ -0.69
SYN3-211ENST00000472027 SLC27A2O14975 620 aa10.72□□□□□ -0.69
SYN3-211ENST00000472027 ALAS1P13196 640 aa10.72□□□□□ -0.69
SYN3-211ENST00000472027 CNGA1P29973 690 aa10.72□□□□□ -0.69
SYN3-211ENST00000472027 TKFCQ3LXA3 575 aa10.72□□□□□ -0.69
SYN3-211ENST00000472027 PRAMEF19Q5SWL8 479 aa10.72□□□□□ -0.69
SYN3-211ENST00000472027 CREB3L3Q68CJ9 461 aa10.72□□□□□ -0.69
SYN3-211ENST00000472027 LHX8Q68G74 356 aa10.72□□□□□ -0.69
SYN3-211ENST00000472027 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.72□□□□□ -0.69
SYN3-211ENST00000472027 UBE2Q1Q7Z7E8 422 aa10.72□□□□□ -0.69
SYN3-211ENST00000472027 ANKRD35Q8N283 1001 aa10.72□□□□□ -0.69
SYN3-211ENST00000472027 TRPV1Q8NER1 839 aa10.72□□□□□ -0.69
SYN3-211ENST00000472027 UBA5Q9GZZ9 404 aa10.72□□□□□ -0.69
SYN3-211ENST00000472027 ACAD9Q9H845 621 aa10.72□□□□□ -0.69
SYN3-211ENST00000472027 ICAM1P05362 532 aa10.71□□□□□ -0.69
SYN3-211ENST00000472027 PARP1P09874 1014 aaKnown RBP10.71□□□□□ -0.69
SYN3-211ENST00000472027 CYBAP13498 195 aa10.71□□□□□ -0.69
SYN3-211ENST00000472027 ASPRV1Q53RT3 343 aa10.71□□□□□ -0.69
SYN3-211ENST00000472027 MUM1L1Q5H9M0 696 aa10.71□□□□□ -0.69
SYN3-211ENST00000472027 MB21D2Q8IYB1 491 aaPredicted RBP10.71□□□□□ -0.69
SYN3-211ENST00000472027 ANKLE1Q8NAG6 615 aa10.71□□□□□ -0.69
SYN3-211ENST00000472027 IGDCC4Q8TDY8 1250 aa10.71□□□□□ -0.69
SYN3-211ENST00000472027 TINF2Q9BSI4 451 aa10.71□□□□□ -0.69
SYN3-211ENST00000472027 CPVLQ9H3G5 476 aa10.71□□□□□ -0.69
SYN3-211ENST00000472027 RNF146Q9NTX7 359 aa10.71□□□□□ -0.69
SYN3-211ENST00000472027 OGDHLQ9ULD0 1010 aa10.71□□□□□ -0.69
SYN3-211ENST00000472027 CCPG1Q9ULG6 757 aa10.71□□□□□ -0.69
SYN3-211ENST00000472027 FARP2O94887 1054 aaPredicted RBP10.7□□□□□ -0.7
SYN3-211ENST00000472027 TAL1P17542 331 aaPredicted RBP10.7□□□□□ -0.7
SYN3-211ENST00000472027 ANTXR2P58335 489 aa10.7□□□□□ -0.7
SYN3-211ENST00000472027 WTAPQ15007 396 aa10.7□□□□□ -0.7
SYN3-211ENST00000472027 SART3Q15020 963 aaKnown RBP10.7□□□□□ -0.7
SYN3-211ENST00000472027 TMEM67Q5HYA8 995 aa10.7□□□□□ -0.7
SYN3-211ENST00000472027 RNF20Q5VTR2 975 aa10.7□□□□□ -0.7
SYN3-211ENST00000472027 ZNF467Q7Z7K2 595 aaPredicted RBP10.7□□□□□ -0.7
SYN3-211ENST00000472027 ADGRF4Q8IZF3 695 aa10.7□□□□□ -0.7
SYN3-211ENST00000472027 STAG2Q8N3U4 1231 aa10.7□□□□□ -0.7
SYN3-211ENST00000472027 MSL3Q8N5Y2 521 aaKnown RBP10.7□□□□□ -0.7
SYN3-211ENST00000472027 PAWRQ96IZ0 340 aaKnown RBP10.7□□□□□ -0.7
SYN3-211ENST00000472027 SENP2Q9HC62 589 aa10.7□□□□□ -0.7
SYN3-211ENST00000472027 A1CFQ9NQ94 594 aaKnown RBP10.7□□□□□ -0.7
SYN3-211ENST00000472027 DDX20Q9UHI6 824 aaKnown RBP10.7□□□□□ -0.7
SYN3-211ENST00000472027 ZNF236Q9UL36 1845 aa10.7□□□□□ -0.7
SYN3-211ENST00000472027 PALM3A6NDB9 673 aaPredicted RBP10.69□□□□□ -0.7
SYN3-211ENST00000472027 POTEB2H3BUK9 544 aa10.69□□□□□ -0.7
SYN3-211ENST00000472027 SEPT4O43236 478 aa10.69□□□□□ -0.7
SYN3-211ENST00000472027 PRC1O43663 620 aa10.69□□□□□ -0.7
SYN3-211ENST00000472027 MSCO60682 206 aa10.69□□□□□ -0.7
SYN3-211ENST00000472027 MCM5P33992 734 aa10.69□□□□□ -0.7
SYN3-211ENST00000472027 MNX1P50219 401 aaPredicted RBP10.69□□□□□ -0.7
SYN3-211ENST00000472027 CNTN2Q02246 1040 aa10.69□□□□□ -0.7
SYN3-211ENST00000472027 COL9A3Q14050 684 aaPredicted RBP10.69□□□□□ -0.7
SYN3-211ENST00000472027 MAMDC4Q6UXC1 1216 aa10.69□□□□□ -0.7
SYN3-211ENST00000472027 NECAB2Q7Z6G3 386 aa10.69□□□□□ -0.7
SYN3-211ENST00000472027 FAM133AQ8N9E0 248 aa10.69□□□□□ -0.7
SYN3-211ENST00000472027 DIS3LQ8TF46 1054 aaKnown RBP10.69□□□□□ -0.7
SYN3-211ENST00000472027 MTA3Q9BTC8 594 aa10.69□□□□□ -0.7
SYN3-211ENST00000472027 VAT1LQ9HCJ6 419 aa10.69□□□□□ -0.7
SYN3-211ENST00000472027 NRBP1Q9UHY1 535 aa10.69□□□□□ -0.7
SYN3-211ENST00000472027 MAD2L2Q9UI95 211 aa10.69□□□□□ -0.7
SYN3-211ENST00000472027 PNMA2Q9UL42 364 aa10.69□□□□□ -0.7
SYN3-211ENST00000472027 BRCA2P51587 3418 aa10.69□□□□□ -0.7
SYN3-211ENST00000472027 SYNGAP1Q96PV0 1343 aa10.68□□□□□ -0.7
SYN3-211ENST00000472027 SOWAHBA6NEL2 793 aa10.68□□□□□ -0.7
SYN3-211ENST00000472027 KLRF2D3W0D1 207 aa10.68□□□□□ -0.7
SYN3-211ENST00000472027 SNAI1O95863 264 aaPredicted RBP10.68□□□□□ -0.7
SYN3-211ENST00000472027 ZNF865P0CJ78 1059 aaPredicted RBP10.68□□□□□ -0.7
SYN3-211ENST00000472027 TROAPQ12815 778 aa10.68□□□□□ -0.7
SYN3-211ENST00000472027 TSGA10IPQ3SY00 556 aa10.68□□□□□ -0.7
SYN3-211ENST00000472027 ANO1Q5XXA6 986 aa10.68□□□□□ -0.7
SYN3-211ENST00000472027 NSMFQ6X4W1 530 aa10.68□□□□□ -0.7
SYN3-211ENST00000472027 CATIPQ7Z7H3 387 aa10.68□□□□□ -0.7
SYN3-211ENST00000472027 CLEC4DQ8WXI8 215 aa10.68□□□□□ -0.7
SYN3-211ENST00000472027 DPF3Q92784 378 aa10.68□□□□□ -0.7
SYN3-211ENST00000472027 TMEM87BQ96K49 555 aa10.68□□□□□ -0.7
SYN3-211ENST00000472027 FGD4Q96M96 766 aa10.68□□□□□ -0.7
SYN3-211ENST00000472027 NEK1Q96PY6 1258 aa10.68□□□□□ -0.7
SYN3-211ENST00000472027 HTATIP2Q9BUP3 242 aa10.68□□□□□ -0.7
SYN3-211ENST00000472027 JMJD4Q9H9V9 463 aa10.68□□□□□ -0.7
SYN3-211ENST00000472027 LY9Q9HBG7 655 aa10.68□□□□□ -0.7
SYN3-211ENST00000472027 GPHNQ9NQX3 736 aaPredicted RBP10.68□□□□□ -0.7
SYN3-211ENST00000472027 CYP39A1Q9NYL5 469 aa10.68□□□□□ -0.7
SYN3-211ENST00000472027 CNPY2Q9Y2B0 182 aa10.68□□□□□ -0.7
SYN3-211ENST00000472027 PFASO15067 1338 aa10.67□□□□□ -0.7
SYN3-211ENST00000472027 WDR19Q8NEZ3 1342 aa10.67□□□□□ -0.7
SYN3-211ENST00000472027 ZNFX1Q9P2E3 1918 aaKnown RBP10.67□□□□□ -0.7
SYN3-211ENST00000472027 NFIBO00712 420 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms