RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 GREB1LQ9C091 1923 aaPredicted RBP7.32□□□□□ -1.24
SPEN-204ENST00000471538 UQCRHLA0A096LP55 91 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 CYTH3O43739 400 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 UQCRHP07919 91 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 SRGNP10124 158 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 GTF2F1P35269 517 aaKnown RBP eCLIP7.32□□□□□ -1.24
SPEN-204ENST00000471538 CDK8P49336 464 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 GNAQP50148 359 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 TGFB2P61812 414 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 FANCCQ00597 558 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 GABPAQ06546 454 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 ZRSR1Q15695 479 aaKnown RBP7.32□□□□□ -1.24
SPEN-204ENST00000471538 E2F4Q16254 413 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 IL17AQ16552 155 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 SLC4A8Q2Y0W8 1093 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 MFSD14BQ5SR56 506 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 ISM2Q6H9L7 571 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 KANK3Q6NY19 840 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 AMOTL1Q8IY63 956 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 TEX11Q8IYF3 940 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 FAM177A1Q8N128 213 aaPredicted RBP7.32□□□□□ -1.24
SPEN-204ENST00000471538 C4orf32Q8N8J7 132 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 MYRIPQ8NFW9 859 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 NEDD1Q8NHV4 660 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 MED15Q96RN5 788 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 TMEM47Q9BQJ4 181 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 COA1Q9GZY4 146 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 MKNK2Q9HBH9 465 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 IFNKQ9P0W0 207 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 SAP30BPQ9UHR5 308 aaKnown RBP7.32□□□□□ -1.24
SPEN-204ENST00000471538 SUGT1Q9Y2Z0 365 aa7.32□□□□□ -1.24
SPEN-204ENST00000471538 IGKV6D-41A0A0C4DH26 115 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 STXBP3O00186 592 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 SLFN14P0C7P3 912 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 TSPY3P0CV98 308 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 TSPY8P0CW00 308 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 ATP1A3P13637 1013 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 ZNF18P17022 549 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 ATP2B1P20020 1258 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 CALML3P27482 149 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 GSDMDP57764 484 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 NLRP5P59047 1200 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 TPM4P67936 248 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 FMR1Q06787 632 aaKnown RBP eCLIP7.31□□□□□ -1.24
SPEN-204ENST00000471538 PTGDRQ13258 359 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 ZNF174Q15697 407 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 WWC2Q6AWC2 1192 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 PIK3AP1Q6ZUJ8 805 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 SLF2Q8IX21 1173 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 GRAMD1CQ8IYS0 662 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 BLIDQ8IZY5 108 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 ZNF444Q8N0Y2 327 aaPredicted RBP7.31□□□□□ -1.24
SPEN-204ENST00000471538 CERS5Q8N5B7 392 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 MLKLQ8NB16 471 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 ENOX1Q8TC92 643 aaKnown RBP7.31□□□□□ -1.24
SPEN-204ENST00000471538 DPF2Q92785 391 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 SYMPKQ92797 1274 aaKnown RBP7.31□□□□□ -1.24
SPEN-204ENST00000471538 EPSTI1Q96J88 318 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 EYA3Q99504 573 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 SPZ1Q9BXG8 430 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 ZNF287Q9HBT7 754 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 HOOK1Q9UJC3 728 aaKnown RBP7.31□□□□□ -1.24
SPEN-204ENST00000471538 PCDHA4Q9UN74 947 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 DAGLAQ9Y4D2 1042 aa7.31□□□□□ -1.24
SPEN-204ENST00000471538 DYNC1I1O14576 645 aa7.3□□□□□ -1.24
SPEN-204ENST00000471538 SIPA1L1O43166 1804 aa7.3□□□□□ -1.24
SPEN-204ENST00000471538 SMC2O95347 1197 aa7.3□□□□□ -1.24
SPEN-204ENST00000471538 NPR1P16066 1061 aa7.3□□□□□ -1.24
SPEN-204ENST00000471538 SMARCA1P28370 1054 aa7.3□□□□□ -1.24
SPEN-204ENST00000471538 LMOD1P29536 600 aaPredicted RBP7.3□□□□□ -1.24
SPEN-204ENST00000471538 KCNJ6P48051 423 aa7.3□□□□□ -1.24
SPEN-204ENST00000471538 DPYDQ12882 1025 aa7.3□□□□□ -1.24
SPEN-204ENST00000471538 CT47A1Q5JQC4 288 aaPredicted RBP7.3□□□□□ -1.24
SPEN-204ENST00000471538 ARL6IP4Q66PJ3 421 aaKnown RBP7.3□□□□□ -1.24
SPEN-204ENST00000471538 GALNT17Q6IS24 598 aa7.3□□□□□ -1.24
SPEN-204ENST00000471538 ARMCX5Q6P1M9 558 aa7.3□□□□□ -1.24
SPEN-204ENST00000471538 OLFM4Q6UX06 510 aa7.3□□□□□ -1.24
SPEN-204ENST00000471538 RASGRP2Q7LDG7 609 aa7.3□□□□□ -1.24
SPEN-204ENST00000471538 FILIP1Q7Z7B0 1213 aa7.3□□□□□ -1.24
SPEN-204ENST00000471538 CCDC150Q8NCX0 1101 aa7.3□□□□□ -1.24
SPEN-204ENST00000471538 GPKOWQ92917 476 aaPredicted RBP eCLIP7.3□□□□□ -1.24
SPEN-204ENST00000471538 SMARCE1Q969G3 411 aa7.3□□□□□ -1.24
SPEN-204ENST00000471538 PAGE5Q96GU1 130 aa7.3□□□□□ -1.24
SPEN-204ENST00000471538 LZTS2Q9BRK4 669 aa7.3□□□□□ -1.24
SPEN-204ENST00000471538 INTS13Q9NVM9 706 aa7.3□□□□□ -1.24
SPEN-204ENST00000471538 BARHL2Q9NY43 387 aa7.3□□□□□ -1.24
SPEN-204ENST00000471538 PCDHA6Q9UN73 950 aa7.3□□□□□ -1.24
SPEN-204ENST00000471538 PCDHA8Q9Y5H6 950 aa7.3□□□□□ -1.24
SPEN-204ENST00000471538 MYO3BQ8WXR4 1341 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 VWA3AA6NCI4 1184 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 C6orf229H3BNL8 230 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 SNHG28P0DPA3 235 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 TOP1P11387 765 aaKnown RBP7.29□□□□□ -1.24
SPEN-204ENST00000471538 SKILP12757 684 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 ERCC5P28715 1186 aaPredicted RBP7.29□□□□□ -1.24
SPEN-204ENST00000471538 GTF2IP78347 998 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 CUL4BQ13620 913 aa7.29□□□□□ -1.24
SPEN-204ENST00000471538 DHX8Q14562 1220 aaKnown RBP7.29□□□□□ -1.24
SPEN-204ENST00000471538 DNTTIP2Q5QJE6 756 aaKnown RBP7.29□□□□□ -1.24
SPEN-204ENST00000471538 PDXDC2PQ6P474 469 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms